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FFCP PHASE1:Mm9::chr17:47642140..47642154,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:47642140..47642154,+
|DHSsupport=NA
|short_description=p10@Ccnd3
|DPIdataset=NA
|description=CAGE_peak_10_at_Ccnd3_5end
|association_with_transcript=140bp_to_ENSMUST00000171031,NM_001081635,NM_001081636,uc008cvk.1,uc008cvl.1,uc008cvm.1_5end
|EntrezGene=12445
|EntrezGene=12445
|HGNC=
|HGNC=
|MCL_coexpression_id=2215
|TSSclassifier=NA
|UniProt=P30282,Q3TSW4,Q3TWY0
|UniProt=P30282,Q3TSW4,Q3TWY0
|association_with_transcript=140bp_to_ENSMUST00000171031,NM_001081635,NM_001081636,uc008cvk.1,uc008cvl.1,uc008cvm.1_5end
|cluster_id=chr17:47642140..47642154,+
|description=CAGE_peak_10_at_Ccnd3_5end
|id=chr17:47642140..47642154,+
|ontology_enrichment_celltype=CL:0000838!4.25e-08!12;CL:0000084!1.65e-07!11;CL:0000827!1.65e-07!11;CL:0000542!2.05e-07!13;CL:0000051!2.05e-07!13
|ontology_enrichment_celltype_v019_2=CL:0000838,5.40e-11,12;CL:0002031,1.88e-10,25;CL:0000084,3.81e-10,11;CL:0000827,3.81e-10,11;CL:0000542,8.56e-10,13;CL:0000051,8.56e-10,13;CL:0000791,9.93e-09,9;CL:0000789,9.93e-09,9;CL:0002420,9.93e-09,9;CL:0002419,9.93e-09,9;CL:0000790,9.93e-09,9;CL:0000624,7.66e-08,8;CL:0000738,1.71e-07,17;CL:0002087,1.71e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001004!2.91e-08!42;UBERON:0000065!4.43e-08!41
|ontology_enrichment_uberon_v019_2=UBERON:0001004,3.12e-12,42;UBERON:0000065,5.72e-12,41;UBERON:0002390,1.50e-10,45;UBERON:0003061,1.50e-10,45;UBERON:0002193,2.23e-10,48;UBERON:0002405,2.23e-10,48;UBERON:0004177,4.94e-10,29;UBERON:0005057,4.94e-10,29;UBERON:0003408,2.04e-09,24;UBERON:0000077,3.00e-09,35;UBERON:0002370,3.51e-09,23;UBERON:0000974,3.51e-09,23;UBERON:0004807,3.51e-09,23;UBERON:0005058,3.51e-09,23;UBERON:0003351,3.51e-09,23;UBERON:0009113,3.51e-09,23;UBERON:0003295,3.51e-09,23;UBERON:0009722,3.51e-09,23;UBERON:0005562,3.51e-09,23;UBERON:0007690,3.51e-09,23;UBERON:0006562,1.54e-08,24;UBERON:0001557,1.54e-08,24;UBERON:0001042,1.54e-08,24;UBERON:0008814,1.54e-08,24;UBERON:0009145,1.54e-08,24;UBERON:0001041,3.55e-08,80;UBERON:0000926,1.18e-07,120;UBERON:0004120,1.18e-07,120;UBERON:0006603,1.18e-07,120;UBERON:0000072,1.42e-07,27;UBERON:0005911,1.65e-07,69;UBERON:0003081,2.70e-07,87;UBERON:0001048,2.81e-07,134
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0.233612640595526,9.29687928779349,3.23814060948833,3.7450324211519,3.76679530096111,1.7549874978974,14.5520620441525,11.3646523144697,1.99865857089398,4.25198061518635,2.79824751251259,8.3597473819933,14.3970155286026,16.1268067683251,1.78590909317247,3.17731043842833,3.91799683708403,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0,12.1374172913703,3.906676722619,2.09409497589519,6.47054636834116,6.83045484958446,2.42755176515577,0.125896817975577,0.202753862439029,0.367093504323363,1.56478268869608,1.74420125104357,1.5378032791413,0.58328969722285,1.1198913730029,2.87505128729943,6.20795642413625,10.1550699881588,7.73015738027667,1.80081605225163,1.43266719969378,3.09403255366465,0,0,0.633831403506179,1.69422266034566,0.889294796111139,0,0.988866362566974,1.4209602298922,0.299600110518405,1.53687322128622,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.510749352340751,0.46081959976873,0,0.182975287204819,0.52091337055676,0.837548997004143,0,0.45839474333043,0,0.427115042397309,0.186399445825301,0.302904773332736,0.0755715601067855,1.73918693221007,0.860423876981386,0,0.539703191637817,0,0,1.40444420131752,0,0,0,0.281686839553361,0,0,0,0.432982082022428,1.01343946190039,0.505524445014783,0.91347103775248,11.3932668804756,1.1875371125186,0.346970653532272,0.608930956624282,0.461230994512117,0.452167921657868,1.99900802130698,0.753999547978053,4.44950941921873,2.31358971071859,0.884610551949874,0,1.10420759230197,0.969750506270444,0,0,0.41889341362691,0.510914110417183,0.479260498023681,0.599902730993408,0,0.748953197024114,1.37250180845588,0.376963056338593,0.347648640384553,1.27857728665165,0.62336413367868,1.1356888414743,1.12023300235348,4.35424397135326,5.05445516867349,0.420883711772948,0,0.229902104433473,0,0.452114453507145,0.680364991513279,0.512454881139399,0,1.29351685369508,0.215567992932842,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.411564272815887,1.19420560091096,0,0,0,0.414251545071004,0,0,0,0,0,0.465067889500816,0,1.63471479314037,0,0.32833492815819,1.29710095273369,0.584799949701329,0.439100230582101,1.07365135008297,1.05144974282064,0.102904612379284,0.330418782983798,0.528901133327089,0.426576501070468,0.232236671860439,0.257734922644187,0,0.22237804384487,1.14135375667535,0,0.658795818896044,0.754005626400808,0.795825888164603,0.19496408711912,0,0,0.796565093017469,0.379335801906163,0.114248512609729,0,0.610953983535943,0.581857461502877,1.47285221769669,0.379419222745544,0.442830443938806,0.941992367048249,0.987177311374404,1.77871576252289,0.166845105716094,0,0.224862112384854,0,0.72353147925725,1.2731292589071,2.01387296215567,4.05338066937588,0.549122826376163,1.43768206527355,1.11642284300551,0,1.26289438973556,0.717589654087649,1.92977408545347,9.42241269849684,0.37898282354097,0.488894929326078,1.01847051465113,0.234690248288502,2.1775813467436,3.57065461329021,8.00047956216975,2.52216230569906,1.10732344824387,1.43509291791738,6.882259218061,3.9717545829156,8.38964539772767,0,0,2.45882136509518,6.89841865761831,0.80275294993896,1.28932855251423,0,0.757412781613119,0,0,0.646270193198397,0.238968797952552,0.668396022247182,0.566153061577665,0.404810701674894,0.584511715822624,0.790575555893047,0.642642632843614,1.56134093729095,1.6025904330053,0.977321756121456,4.12425307431339,0,0,0.302323556964751,0.377210159511796,1.77181135728464,0.307435147943927,1.55056975900933,0,0,0.948110273807448,0,1.03135543248187,3.06395645178409,0.36012218806262,0.129358683782755,0,0.532020700926821,0.535106452806212,0.822745103010605,1.8267896946876,0,1.27099242518292,0.882113592219848,0.32977250588296,0.807322133479528,0.0603129249281559,0.119372344003136,0.328281799490123,0.874442509889552,1.29797711407357,3.07567585436135,0.412773735926445,1.29636169158798,0.753473828018764,2.1871076435364,4.11800711771741,2.37969801991397,2.23922323717853,2.76399947608848,0,0.474503990371703,0,0.648032044930808,0.418176592028937,0.218362563746178,0.539457385539283,0.826534557253359,0.523511883968059,0.777689839750757,1.24267862617385,1.12738587736838,0.747582730219894,0.330916980914195,0.777804753376191,0.904118764344118,0.844780627453891,1.64300134104056,1.69265700297135,0.943734099831398,0,0.288030006257865,6.00421129193539,0,0.102710957164827,1.68897069871134,1.9692936523423,1.98681354781265,2.52410443991935,2.51072196196781,3.33189284828887,1.98137697303,3.02478555410522,3.50848370663109,5.29165129021812,7.83075244616512,0.680191150845634,0.221985953374065,0,0,0.772758376128762,0.375364950902364,1.46521299413812,1.07184189539533,1.00314420807073,0,0,0.572895513439397,0.343706364687375,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,0.551530525350042,0.666740183404846,1.03017528619447,0.962757628775446,1.26348605881899,0.25347929989024,0.754505365544305,0.561849044819294,0.448176066834085,0.459483751644906,0.476293691283074,0.811190281613988,0.77163688185482,0.824171801606613,0.588795680537589,0.685738504770831,0,1.43061713968393,0.726732083161643,0.752875043322645,0.676916863133412,0.73171189149109,0.263069711437843,0.407412341537585,0,0.949080144993393,0.788035859004508,0.409231043169689,0.464810523557898,1.35034627686799,0.749431733813838,1.87145286756327,0.644613162144895,2.29545998482612,0.441182838239031,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0.233612640595526,9.29687928779349,3.23814060948833,3.7450324211519,3.76679530096111,1.7549874978974,14.5520620441525,11.3646523144697,1.99865857089398,4.25198061518635,2.79824751251259,8.3597473819933,14.3970155286026,16.1268067683251,1.78590909317247,3.17731043842833,3.91799683708403,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0.252030129759931,0.221730510655305,0.635030673459631,0,0,0,0.166234645358492,0,12.1374172913703,3.906676722619,2.09409497589519,6.47054636834116,6.83045484958446,2.42755176515577,0.125896817975577,0.202753862439029,0.367093504323363,1.56478268869608,1.74420125104357,1.5378032791413,0.58328969722285,1.1198913730029,2.87505128729943,6.20795642413625,10.1550699881588,7.73015738027667,1.80081605225163,1.43266719969378,3.09403255366465,0,0,0.633831403506179,1.69422266034566,0.889294796111139,0,0.988866362566974,1.4209602298922,0.299600110518405,1.53687322128622,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.510749352340751,0.46081959976873,0,0.182975287204819,0.52091337055676,0.837548997004143,0,0.45839474333043,0,0.427115042397309,0.186399445825301,0.302904773332736,0.0755715601067855,1.73918693221007,0.860423876981386,0,0.539703191637817,0,0,1.40444420131752,0,0,0,0.281686839553361,0,0,0,0.432982082022428,1.01343946190039,0.505524445014783,0.91347103775248,11.3932668804756,1.1875371125186,0.346970653532272,0.608930956624282,0.461230994512117,0.452167921657868,1.99900802130698,0.753999547978053,4.44950941921873,2.31358971071859,0.884610551949874,0,1.10420759230197,0.969750506270444,0,0,0.41889341362691,0.510914110417183,0.479260498023681,0.599902730993408,0,0.748953197024114,1.37250180845588,0.376963056338593,0.347648640384553,1.27857728665165,0.62336413367868,1.1356888414743,1.12023300235348,4.35424397135326,5.05445516867349,0.420883711772948,0,0.229902104433473,0,0.452114453507145,0.680364991513279,0.512454881139399,0,1.29351685369508,0.215567992932842,0.189106080167819,0,0,0.556094498451196,0.348252166522167,0.411564272815887,1.19420560091096,0,0,0,0.414251545071004,0,0,0,0,0,0.465067889500816,0,1.63471479314037,0,0.32833492815819,1.29710095273369,0.584799949701329,0.439100230582101,1.07365135008297,1.05144974282064,0.102904612379284,0.330418782983798,0.528901133327089,0.426576501070468,0.232236671860439,0.257734922644187,0,0.22237804384487,1.14135375667535,0,0.658795818896044,0.754005626400808,0.795825888164603,0.19496408711912,0,0,0.796565093017469,0.379335801906163,0.114248512609729,0,0.610953983535943,0.581857461502877,1.47285221769669,0.379419222745544,0.442830443938806,0.941992367048249,0.987177311374404,1.77871576252289,0.166845105716094,0,0.224862112384854,0,0.72353147925725,1.2731292589071,2.01387296215567,4.05338066937588,0.549122826376163,1.43768206527355,1.11642284300551,0,1.26289438973556,0.717589654087649,1.92977408545347,9.42241269849684,0.37898282354097,0.488894929326078,1.01847051465113,0.234690248288502,2.1775813467436,3.57065461329021,8.00047956216975,2.52216230569906,1.10732344824387,1.43509291791738,6.882259218061,3.9717545829156,8.38964539772767,0,0,2.45882136509518,6.89841865761831,0.80275294993896,1.28932855251423,0,0.757412781613119,0,0,0.646270193198397,0.238968797952552,0.668396022247182,0.566153061577665,0.404810701674894,0.584511715822624,0.790575555893047,0.642642632843614,1.56134093729095,1.6025904330053,0.977321756121456,4.12425307431339,0,0,0.302323556964751,0.377210159511796,1.77181135728464,0.307435147943927,1.55056975900933,0,0,0.948110273807448,0,1.03135543248187,3.06395645178409,0.36012218806262,0.129358683782755,0,0.532020700926821,0.535106452806212,0.822745103010605,1.8267896946876,0,1.27099242518292,0.882113592219848,0.32977250588296,0.807322133479528,0.0603129249281559,0.119372344003136,0.328281799490123,0.874442509889552,1.29797711407357,3.07567585436135,0.412773735926445,1.29636169158798,0.753473828018764,2.1871076435364,4.11800711771741,2.37969801991397,2.23922323717853,2.76399947608848,0,0.474503990371703,0,0.648032044930808,0.418176592028937,0.218362563746178,0.539457385539283,0.826534557253359,0.523511883968059,0.777689839750757,1.24267862617385,1.12738587736838,0.747582730219894,0.330916980914195,0.777804753376191,0.904118764344118,0.844780627453891,1.64300134104056,1.69265700297135,0.943734099831398,0,0.288030006257865,6.00421129193539,0,0.102710957164827,1.68897069871134,1.9692936523423,1.98681354781265,2.52410443991935,2.51072196196781,3.33189284828887,1.98137697303,3.02478555410522,3.50848370663109,5.29165129021812,7.83075244616512,0.680191150845634,0.221985953374065,0,0,0.772758376128762,0.375364950902364,1.46521299413812,1.07184189539533,1.00314420807073,0,0,0.572895513439397,0.343706364687375,0.685082519770642,0,0,0,0,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,0.551530525350042,0.666740183404846,1.03017528619447,0.962757628775446,1.26348605881899,0.25347929989024,0.754505365544305,0.561849044819294,0.448176066834085,0.45948375164490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|short_description=p10@Ccnd3
}}
}}

Latest revision as of 14:18, 26 September 2015

Short description:p10@Ccnd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_10_at_Ccnd3_5end
Coexpression cluster:MCL_coexpression_mm9:2215
Association with transcript: 140bp_to_ENSMUST00000171031, NM_001081635, NM_001081636, uc008cvk.1, uc008cvl.1, uc008cvm.1_5end
EntrezGene:Ccnd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p10@Ccnd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.75
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.55
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E811.36
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.25
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.36
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A414.40
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A616.13
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.14
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.74
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.21
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A17.73
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H911.39
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B21.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.12
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.35
epididymis, adult.CNhs10490.58-23B25.05
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G11.30
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.47
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D11.93
lung, adult.CNhs10474.28-22B19.42
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I63.57
lung, neonate N00.CNhs11224.640-42C68.00
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A46.88
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H28.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H26.90
medulla oblongata, adult.CNhs10477.17-12C20.80
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G34.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.76
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D90.94
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B56.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C72.51
thymus, neonate N06.CNhs11197.681-26C43.33
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E43.02
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G75.29
thymus, neonate N30.CNhs11132.1393-42G27.83
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
respiratory system3.12e-1242
respiratory tract5.72e-1241
hematopoietic system1.50e-1045
blood island1.50e-1045
hemolymphoid system2.23e-1048
immune system2.23e-1048
hemopoietic organ4.94e-1029
immune organ4.94e-1029
gland of gut2.04e-0924
mixed endoderm/mesoderm-derived structure3.00e-0935
thymus3.51e-0923
neck3.51e-0923
respiratory system epithelium3.51e-0923
hemolymphoid system gland3.51e-0923
pharyngeal epithelium3.51e-0923
thymic region3.51e-0923
pharyngeal gland3.51e-0923
entire pharyngeal arch endoderm3.51e-0923
thymus primordium3.51e-0923
early pharyngeal endoderm3.51e-0923
pharynx1.54e-0824
upper respiratory tract1.54e-0824
chordate pharynx1.54e-0824
pharyngeal arch system1.54e-0824
pharyngeal region of foregut1.54e-0824
foregut3.55e-0880
mesoderm1.18e-07120
mesoderm-derived structure1.18e-07120
presumptive mesoderm1.18e-07120
segment of respiratory tract1.42e-0727
endo-epithelium1.65e-0769
lateral plate mesoderm2.70e-0787
primordium2.81e-07134
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