FFCP PHASE1:Hg19::chrX:112084017..112084031,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:112084017..112084031,- to FFCP PHASE1:Hg19::chrX:112084017..112084031,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=154796 | |EntrezGene=154796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17810 | |HGNC=17810 | ||
|TSSclassifier=strong | |||
|UniProt=Q4VCS5 | |UniProt=Q4VCS5 | ||
|association_with_transcript=11bp_to_ENST00000304758,NM_133265,uc004eps.2_5end | |||
|cluster_id=chrX:112084017..112084031,- | |||
|coexpression_cluster_id=C2951 | |||
|description=CAGE_peak_3_at_AMOT_5end | |||
|id=chrX:112084017..112084031,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.86e-10;19!CL:0000128;6.91e-09;7!CL:0000126;6.91e-09;7!CL:0000127;6.91e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.06e-10,19;CL:0000128,1.23e-08,7;CL:0000126,1.23e-08,7;CL:0000127,1.23e-08,7;CL:0002453,1.23e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.03e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.22e-33!82;UBERON:0001049!1.96e-33!57;UBERON:0005068!1.96e-33!57;UBERON:0006241!1.96e-33!57;UBERON:0007135!1.96e-33!57;UBERON:0005743!1.07e-32!86;UBERON:0000073!1.03e-30!94;UBERON:0001016!1.03e-30!94;UBERON:0000955!1.32e-29!69;UBERON:0006238!1.32e-29!69;UBERON:0002616!1.45e-28!59;UBERON:0007023!1.55e-26!115;UBERON:0003080!1.02e-24!42;UBERON:0002780!1.84e-24!41;UBERON:0001890!1.84e-24!41;UBERON:0006240!1.84e-24!41;UBERON:0000924!5.64e-24!173;UBERON:0006601!5.64e-24!173;UBERON:0004121!6.18e-24!169;UBERON:0002020!8.68e-24!34;UBERON:0003528!8.68e-24!34;UBERON:0001893!1.09e-23!34;UBERON:0003075!1.54e-23!86;UBERON:0007284!1.54e-23!86;UBERON:0002346!3.12e-23!90;UBERON:0002791!5.00e-23!33;UBERON:0000153!1.56e-22!129;UBERON:0007811!1.56e-22!129;UBERON:0001869!2.74e-22!32;UBERON:0000033!2.02e-21!123;UBERON:0003056!3.98e-18!61;UBERON:0000956!3.26e-17!25;UBERON:0000203!3.26e-17!25;UBERON:0002619!1.65e-15!22;UBERON:0001950!1.79e-14!20;UBERON:0000475!1.35e-11!365;UBERON:0000064!3.33e-11!219;UBERON:0005631!5.80e-10!14;UBERON:0000158!5.80e-10!14;UBERON:0003076!9.47e-10!15;UBERON:0003057!9.47e-10!15;UBERON:0004732!1.94e-08!13;UBERON:0002308!4.72e-08!9;UBERON:0000125!4.72e-08!9;UBERON:0000062!4.91e-08!511;UBERON:0004733!5.40e-08!12;UBERON:0002028!5.40e-08!12;UBERON:0007277!5.40e-08!12;UBERON:0002420!7.35e-08!9;UBERON:0007245!7.35e-08!9;UBERON:0010009!7.35e-08!9;UBERON:0010011!7.35e-08!9;UBERON:0000454!7.35e-08!9;UBERON:0000025!1.45e-07!194;UBERON:0000477!2.00e-07!286;UBERON:0000468!2.90e-07!659;UBERON:0004111!4.83e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.19e-34;34!UBERON:0002020;1.19e-34;34!UBERON:0001893;1.86e-34;34!UBERON:0002791;4.80e-34;32!UBERON:0001869;6.70e-34;32!UBERON:0002780;5.86e-31;41!UBERON:0001890;5.86e-31;41!UBERON:0000073;8.07e-31;53!UBERON:0002616;8.07e-31;53!UBERON:0000956;8.68e-28;25!UBERON:0000203;8.68e-28;25!UBERON:0002619;2.23e-24;22!UBERON:0001950;2.63e-24;20!UBERON:0001017;1.11e-21;75!UBERON:0000955;1.58e-20;68!UBERON:0001016;1.85e-18;83!UBERON:0000125;3.75e-14;9!UBERON:0002308;3.75e-14;9!UBERON:0002420;1.17e-13;9!UBERON:0007245;1.17e-13;9!UBERON:0010009;1.17e-13;9!UBERON:0010011;1.17e-13;9!UBERON:0000454;1.17e-13;9!UBERON:0004732;2.78e-13;13!UBERON:0004733;1.81e-12;12!UBERON:0002028;1.81e-12;12!UBERON:0009663;2.31e-11;7!UBERON:0005631;4.58e-11;10!UBERON:0000158;4.58e-11;10!UBERON:0000478;3.65e-10;24!UBERON:0002298;1.32e-09;6!UBERON:0000200;1.38e-09;6!UBERON:0002680;1.27e-08;9!UBERON:0001895;1.27e-08;9!UBERON:0011216;1.87e-08;132!UBERON:0007023;2.84e-08;114!UBERON:0001872;7.80e-08;5!UBERON:0002021;1.92e-07;5!UBERON:0000305;2.06e-07;7!UBERON:0001871;2.48e-07;6!UBERON:0000369;3.41e-07;4!UBERON:0002435;3.41e-07;4!UBERON:0000204;3.41e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.85e-58,56;UBERON:0005068,3.85e-58,56;UBERON:0006241,3.85e-58,56;UBERON:0007135,3.85e-58,56;UBERON:0000073,1.63e-54,53;UBERON:0002616,1.63e-54,53;UBERON:0001017,3.39e-49,81;UBERON:0000955,9.78e-49,68;UBERON:0006238,9.78e-49,68;UBERON:0001016,1.88e-45,89;UBERON:0002780,4.13e-43,41;UBERON:0001890,4.13e-43,41;UBERON:0003080,4.13e-43,41;UBERON:0006240,4.13e-43,41;UBERON:0002346,3.04e-42,86;UBERON:0003075,7.65e-42,82;UBERON:0007284,7.65e-42,82;UBERON:0003528,4.12e-40,34;UBERON:0002020,4.12e-40,34;UBERON:0001893,6.27e-40,34;UBERON:0002791,2.89e-37,32;UBERON:0001869,3.01e-37,32;UBERON:0004121,2.87e-31,171;UBERON:0000924,2.87e-31,171;UBERON:0006601,2.87e-31,171;UBERON:0003056,9.10e-31,61;UBERON:0010371,2.46e-30,104;UBERON:0000956,1.39e-27,25;UBERON:0000203,1.39e-27,25;UBERON:0007023,8.11e-25,114;UBERON:0010314,1.47e-24,132;UBERON:0002619,2.63e-24,22;UBERON:0001950,3.13e-24,20;UBERON:0011216,3.42e-18,223;UBERON:0005631,1.03e-15,14;UBERON:0000158,1.03e-15,14;UBERON:0003076,1.42e-15,15;UBERON:0003057,1.42e-15,15;UBERON:0000125,5.01e-14,9;UBERON:0002308,5.01e-14,9;UBERON:0002420,1.17e-13,9;UBERON:0007245,1.17e-13,9;UBERON:0010009,1.17e-13,9;UBERON:0010011,1.17e-13,9;UBERON:0000454,1.17e-13,9;UBERON:0004732,4.27e-13,13;UBERON:0004733,3.09e-12,12;UBERON:0002028,3.09e-12,12;UBERON:0007277,3.09e-12,12;UBERON:0009663,3.03e-11,7;UBERON:0000025,9.10e-11,192;UBERON:0000478,3.73e-10,24;UBERON:0003124,5.18e-10,7;UBERON:0000200,1.10e-09,6;UBERON:0002298,1.29e-09,6;UBERON:0004111,7.87e-09,240;UBERON:0002680,2.11e-08,9;UBERON:0001895,2.11e-08,9;UBERON:0010092,2.11e-08,9;UBERON:0001872,6.82e-08,5;UBERON:0000305,1.93e-07,7;UBERON:0001871,2.38e-07,6;UBERON:0002021,2.65e-07,5;UBERON:0000369,3.75e-07,4;UBERON:0002435,3.75e-07,4;UBERON:0000204,3.75e-07,4;UBERON:0010082,3.75e-07,4 | |||
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|short_description=p3@AMOT | |||
}} | }} |
Latest revision as of 02:24, 19 September 2015
Short description: | p3@AMOT |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AMOT_5end |
Coexpression cluster: | C2951_epididymis_ductus_embryonic_seminal_Amniotic_locus_diaphragm |
Association with transcript: | 11bp_to_ENST00000304758, NM_133265, uc004eps.2_5end |
EntrezGene: | AMOT |
HGNC: | 17810 |
UniProt: | Q4VCS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.06e-10 | 19 |
oligodendrocyte | 1.23e-08 | 7 |
macroglial cell | 1.23e-08 | 7 |
astrocyte | 1.23e-08 | 7 |
oligodendrocyte precursor cell | 1.23e-08 | 7 |