FFCP PHASE1:Hg19::chr9:35748874..35748895,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:35748874..35748895,- to FFCP PHASE1:Hg19::chr9:35748874..35748895,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57704 | |EntrezGene=57704 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18986 | |HGNC=18986 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_uc011lpb.1_5end | |||
|cluster_id=chr9:35748874..35748895,- | |||
|description=CAGE_peak_3_at_GBA2_5end | |||
|id=chr9:35748874..35748895,- | |||
|ontology_enrichment_celltype=CL:0000115!2.55e-14!35;CL:0002139!3.00e-14!24;CL:0000071!2.42e-13!18;CL:0002546!2.42e-13!18;CL:0002078!9.47e-10!44;CL:1000413!1.29e-07!9;CL:0000213!6.83e-07!57;CL:0000215!6.83e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.17e-28;24!CL:0000071;3.22e-26;18!CL:0000115;2.53e-23;36!CL:1000413;2.23e-14;9!CL:0002078;6.83e-13;45!CL:0000213;6.58e-12;58!CL:0000215;6.58e-12;58!CL:0002544;4.08e-10;6!CL:0002543;4.84e-10;6!CL:0002188;3.42e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,5.06e-28,36;CL:0002139,6.27e-28,24;CL:0000071,2.14e-26,18;CL:0002546,2.14e-26,18;CL:0002078,2.50e-20,45;CL:0000213,7.70e-17,58;CL:0000215,7.70e-17,58;CL:1000413,2.53e-14,9;CL:0000222,1.72e-10,121;CL:0002544,4.43e-10,6;CL:0002543,5.45e-10,6;CL:0002188,3.57e-08,5;CL:0002321,6.76e-08,250;CL:0000066,9.12e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;3.22e-26;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.87e-14!69;UBERON:0001981!8.57e-14!60;UBERON:0007500!8.57e-14!60;UBERON:0004537!8.57e-14!60;UBERON:0006965!8.57e-14!60;UBERON:0001986!2.42e-13!18;UBERON:0004638!2.42e-13!18;UBERON:0004852!2.42e-13!18;UBERON:0002049!5.06e-13!79;UBERON:0007798!5.06e-13!79;UBERON:0003914!4.76e-11!118;UBERON:0004111!5.97e-11!241;UBERON:0004872!1.30e-10!84;UBERON:0001637!4.24e-10!42;UBERON:0003509!4.24e-10!42;UBERON:0004572!4.24e-10!42;UBERON:0000025!5.88e-10!194;UBERON:0001009!1.12e-09!113;UBERON:0000487!2.20e-09!22;UBERON:0004535!2.93e-09!110;UBERON:0004573!4.80e-09!33;UBERON:0004571!4.80e-09!33;UBERON:0000477!4.20e-08!286;UBERON:0006914!1.25e-07!25;UBERON:0003915!1.29e-07!9;UBERON:0004700!1.29e-07!9;UBERON:0001917!1.29e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.22e-26;18!UBERON:0001986;3.22e-26;18!UBERON:0004852;3.22e-26;18!UBERON:0000487;3.19e-20;22!UBERON:0000490;3.60e-17;33!UBERON:0006914;5.20e-17;25!UBERON:0003915;2.23e-14;9!UBERON:0004700;2.23e-14;9!UBERON:0001917;2.23e-14;9!UBERON:0007500;4.96e-11;56!UBERON:0001981;4.96e-11;56!UBERON:0004537;4.96e-11;56!UBERON:0004573;1.15e-10;33!UBERON:0004571;1.15e-10;33!UBERON:0001637;1.27e-10;42!UBERON:0003509;1.27e-10;42!UBERON:0004572;1.27e-10;42!UBERON:0000055;8.43e-10;65!UBERON:0002049;4.64e-09;75!UBERON:0007798;4.64e-09;75!UBERON:0000947;2.83e-07;21!UBERON:0010191;2.83e-07;21!UBERON:0000160;3.17e-07;17!UBERON:0003914;3.92e-07;74!UBERON:0001009;8.39e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.14e-26,18;UBERON:0001986,2.14e-26,18;UBERON:0004852,2.14e-26,18;UBERON:0000487,2.30e-20,22;UBERON:0002049,5.79e-20,78;UBERON:0007798,5.79e-20,78;UBERON:0000055,7.26e-20,68;UBERON:0007500,1.19e-18,59;UBERON:0001981,1.19e-18,59;UBERON:0004537,1.19e-18,59;UBERON:0006965,1.19e-18,59;UBERON:0006914,3.91e-17,25;UBERON:0003914,4.79e-17,117;UBERON:0001009,1.81e-14,112;UBERON:0004535,1.91e-14,109;UBERON:0003915,2.53e-14,9;UBERON:0004700,2.53e-14,9;UBERON:0001917,2.53e-14,9;UBERON:0004872,1.34e-12,83;UBERON:0001637,2.07e-11,42;UBERON:0003509,2.07e-11,42;UBERON:0004572,2.07e-11,42;UBERON:0004573,2.47e-11,33;UBERON:0004571,2.47e-11,33;UBERON:0000025,7.41e-10,192;UBERON:0000490,1.08e-09,148;UBERON:0004111,1.68e-08,240;UBERON:0000947,4.36e-07,21;UBERON:0010191,4.36e-07,21;UBERON:0000160,4.98e-07,17 | |||
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| ||
|short_description=p3@GBA2 | |||
}} | }} |
Latest revision as of 08:46, 17 September 2015
Short description: | p3@GBA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GBA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_uc011lpb.1_5end |
EntrezGene: | GBA2 |
HGNC: | 18986 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 5.06e-28 | 36 |
endothelial cell of vascular tree | 6.27e-28 | 24 |
blood vessel endothelial cell | 2.14e-26 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.14e-26 | 18 |
meso-epithelial cell | 2.50e-20 | 45 |
lining cell | 7.70e-17 | 58 |
barrier cell | 7.70e-17 | 58 |
endothelial cell of artery | 2.53e-14 | 9 |
mesodermal cell | 1.72e-10 | 121 |
aortic endothelial cell | 4.43e-10 | 6 |
vein endothelial cell | 5.45e-10 | 6 |
glomerular endothelial cell | 3.57e-08 | 5 |
embryonic cell | 6.76e-08 | 250 |
epithelial cell | 9.12e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.14e-26 | 18 |
endothelium | 2.14e-26 | 18 |
cardiovascular system endothelium | 2.14e-26 | 18 |
simple squamous epithelium | 2.30e-20 | 22 |
vasculature | 5.79e-20 | 78 |
vascular system | 5.79e-20 | 78 |
vessel | 7.26e-20 | 68 |
epithelial tube open at both ends | 1.19e-18 | 59 |
blood vessel | 1.19e-18 | 59 |
blood vasculature | 1.19e-18 | 59 |
vascular cord | 1.19e-18 | 59 |
squamous epithelium | 3.91e-17 | 25 |
epithelial tube | 4.79e-17 | 117 |
circulatory system | 1.81e-14 | 112 |
cardiovascular system | 1.91e-14 | 109 |
endothelial tube | 2.53e-14 | 9 |
arterial system endothelium | 2.53e-14 | 9 |
endothelium of artery | 2.53e-14 | 9 |
splanchnic layer of lateral plate mesoderm | 1.34e-12 | 83 |
artery | 2.07e-11 | 42 |
arterial blood vessel | 2.07e-11 | 42 |
arterial system | 2.07e-11 | 42 |
systemic artery | 2.47e-11 | 33 |
systemic arterial system | 2.47e-11 | 33 |
tube | 7.41e-10 | 192 |
unilaminar epithelium | 1.08e-09 | 148 |
anatomical conduit | 1.68e-08 | 240 |
aorta | 4.36e-07 | 21 |
aortic system | 4.36e-07 | 21 |
intestine | 4.98e-07 | 17 |