FFCP PHASE1:Hg19::chr9:19789028..19789050,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:19789028..19789050,- to FFCP PHASE1:Hg19::chr9:19789028..19789050,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25769 | |EntrezGene=25769 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10976 | |HGNC=10976 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-220bp_to_uc003zod.1_5end | |||
|cluster_id=chr9:19789028..19789050,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_SLC24A2_5end | |||
|id=chr9:19789028..19789050,- | |||
|ontology_enrichment_celltype=CL:0000047!1.39e-10!8;CL:0000540!2.14e-08!6;CL:0000031!2.14e-08!6;CL:0000404!2.14e-08!6;CL:0002322!7.06e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.70e-12;6!CL:0000404;3.70e-12;6!CL:0002319;4.80e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.56e-15,8;CL:0000540,3.78e-12,6;CL:0000031,3.78e-12,6;CL:0000404,3.78e-12,6;CL:0002319,5.21e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.42e-24;82!CL:0000031;3.70e-12;6!UBERON:0006241;4.94e-08;3!UBERON:0003057;4.94e-08;3!UBERON:0006215;1.44e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;5.31e-54;41!UBERON:0001890;5.31e-54;41!UBERON:0001893;2.02e-51;34!UBERON:0000073;6.39e-51;53!UBERON:0002616;6.39e-51;53!UBERON:0003528;1.56e-50;34!UBERON:0002020;1.56e-50;34!UBERON:0002791;8.20e-50;32!UBERON:0001869;8.31e-50;32!UBERON:0002619;1.10e-46;22!UBERON:0001950;1.70e-42;20!UBERON:0000956;1.67e-40;25!UBERON:0000203;1.67e-40;25!UBERON:0001017;3.83e-37;75!UBERON:0000955;2.00e-35;68!UBERON:0001016;1.47e-33;83!UBERON:0000125;2.01e-21;9!UBERON:0002308;2.01e-21;9!UBERON:0002420;4.60e-21;9!UBERON:0007245;4.60e-21;9!UBERON:0010009;4.60e-21;9!UBERON:0010011;4.60e-21;9!UBERON:0000454;4.60e-21;9!UBERON:0009663;3.64e-17;7!UBERON:0004732;5.47e-17;13!UBERON:0001894;2.89e-16;7!UBERON:0007023;4.93e-15;114!UBERON:0000200;4.99e-15;6!UBERON:0004733;8.75e-15;12!UBERON:0002028;8.75e-15;12!UBERON:0002298;1.69e-14;6!UBERON:0002021;6.85e-13;5!UBERON:0001872;1.44e-12;5!UBERON:0011216;6.12e-12;132!UBERON:0000349;6.36e-12;5!UBERON:0001871;7.90e-12;6!UBERON:0002784;1.71e-10;4!UBERON:0000369;4.26e-10;4!UBERON:0002435;4.26e-10;4!UBERON:0000204;4.26e-10;4!UBERON:0003296;2.91e-09;4!UBERON:0010133;2.91e-09;4!UBERON:0002680;3.36e-09;9!UBERON:0001895;3.36e-09;9!UBERON:0010314;2.35e-08;132!UBERON:0000988;2.44e-08;3!UBERON:0001870;2.65e-08;3!UBERON:0002240;4.94e-08;3!UBERON:0005174;4.94e-08;3!UBERON:0001137;4.94e-08;3!UBERON:0005383;7.20e-08;3!UBERON:0005382;7.20e-08;3!UBERON:0001896;7.72e-08;3!UBERON:0005290;7.72e-08;3!UBERON:0002050;2.84e-07;5!UBERON:0005423;2.84e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.61e-104,81;UBERON:0001016,1.24e-102,89;UBERON:0001049,1.30e-96,56;UBERON:0005068,1.30e-96,56;UBERON:0006241,1.30e-96,56;UBERON:0007135,1.30e-96,56;UBERON:0000073,8.05e-90,53;UBERON:0002616,8.05e-90,53;UBERON:0000955,5.24e-79,68;UBERON:0006238,5.24e-79,68;UBERON:0002780,4.86e-76,41;UBERON:0001890,4.86e-76,41;UBERON:0003080,4.86e-76,41;UBERON:0006240,4.86e-76,41;UBERON:0002346,1.04e-74,86;UBERON:0003075,4.11e-70,82;UBERON:0007284,4.11e-70,82;UBERON:0001893,7.77e-61,34;UBERON:0003528,1.93e-60,34;UBERON:0002020,1.93e-60,34;UBERON:0004121,3.49e-58,171;UBERON:0000924,3.49e-58,171;UBERON:0006601,3.49e-58,171;UBERON:0010371,1.74e-56,104;UBERON:0002791,4.57e-56,32;UBERON:0001869,5.18e-56,32;UBERON:0003056,1.58e-53,61;UBERON:0007023,4.42e-49,114;UBERON:0002619,1.08e-46,22;UBERON:0001950,1.67e-42,20;UBERON:0010314,1.80e-41,132;UBERON:0000956,1.64e-40,25;UBERON:0000203,1.64e-40,25;UBERON:0011216,6.88e-35,223;UBERON:0000125,1.99e-21,9;UBERON:0002308,1.99e-21,9;UBERON:0002420,4.55e-21,9;UBERON:0007245,4.55e-21,9;UBERON:0010009,4.55e-21,9;UBERON:0010011,4.55e-21,9;UBERON:0000454,4.55e-21,9;UBERON:0003076,9.36e-21,15;UBERON:0003057,9.36e-21,15;UBERON:0000025,2.58e-20,192;UBERON:0009663,3.60e-17,7;UBERON:0004732,5.62e-17,13;UBERON:0001894,2.92e-16,7;UBERON:0006222,2.92e-16,7;UBERON:0000200,4.87e-15,6;UBERON:0004733,8.98e-15,12;UBERON:0002028,8.98e-15,12;UBERON:0007277,8.98e-15,12;UBERON:0002298,1.71e-14,6;UBERON:0004111,1.63e-13,240;UBERON:0002021,6.94e-13,5;UBERON:0001872,1.42e-12,5;UBERON:0000349,6.37e-12,5;UBERON:0001871,7.75e-12,6;UBERON:0000483,8.49e-11,306;UBERON:0000119,1.48e-10,309;UBERON:0002784,1.73e-10,4;UBERON:0000369,4.26e-10,4;UBERON:0002435,4.26e-10,4;UBERON:0000204,4.26e-10,4;UBERON:0010082,4.26e-10,4;UBERON:0000922,2.03e-09,592;UBERON:0003296,2.91e-09,4;UBERON:0010133,2.91e-09,4;UBERON:0002680,3.43e-09,9;UBERON:0001895,3.43e-09,9;UBERON:0010092,3.43e-09,9;UBERON:0000988,2.47e-08,3;UBERON:0001870,2.65e-08,3;UBERON:0002050,4.75e-08,564;UBERON:0002240,4.83e-08,3;UBERON:0005174,4.83e-08,3;UBERON:0001137,4.83e-08,3;UBERON:0005383,7.20e-08,3;UBERON:0005382,7.20e-08,3;UBERON:0001896,7.72e-08,3;UBERON:0005290,7.72e-08,3;UBERON:0010096,7.72e-08,3;UBERON:0000923,9.80e-08,560;UBERON:0010316,9.80e-08,560;UBERON:0005291,9.80e-08,560;UBERON:0006598,9.80e-08,560;UBERON:0010317,9.80e-08,560;UBERON:0002532,9.80e-08,560;UBERON:0005423,2.85e-07,581 | |||
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| ||
|short_description=p1@SLC24A2 | |||
}} | }} |
Latest revision as of 21:29, 16 September 2015
Short description: | p1@SLC24A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC24A2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -220bp_to_uc003zod.1_5end |
EntrezGene: | SLC24A2 |
HGNC: | 10976 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.56e-15 | 8 |
neuron | 3.78e-12 | 6 |
neuroblast | 3.78e-12 | 6 |
electrically signaling cell | 3.78e-12 | 6 |
neural cell | 5.21e-07 | 25 |