FFCP PHASE1:Hg19::chr8:67090690..67090706,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:67090690..67090706,- to FFCP PHASE1:Hg19::chr8:67090690..67090706,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1392 | |EntrezGene=1392 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2355 | |HGNC=2355 | ||
|TSSclassifier=strong | |||
|UniProt=P06850 | |UniProt=P06850 | ||
|association_with_transcript=0bp_to_uc003xvy.1_5end | |||
|cluster_id=chr8:67090690..67090706,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_CRH_5end | |||
|id=chr8:67090690..67090706,- | |||
|ontology_enrichment_celltype=CL:0000047!3.86e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;4.36e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.64e-12,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.09e-13;82!UBERON:0010122;5.07e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.68e-82!82;UBERON:0001049!5.68e-82!57;UBERON:0005068!5.68e-82!57;UBERON:0006241!5.68e-82!57;UBERON:0007135!5.68e-82!57;UBERON:0005743!1.02e-80!86;UBERON:0002780!1.05e-78!41;UBERON:0001890!1.05e-78!41;UBERON:0006240!1.05e-78!41;UBERON:0003080!1.33e-76!42;UBERON:0002616!6.17e-72!59;UBERON:0000073!9.35e-72!94;UBERON:0001016!9.35e-72!94;UBERON:0000955!3.22e-68!69;UBERON:0006238!3.22e-68!69;UBERON:0002020!5.63e-68!34;UBERON:0003528!5.63e-68!34;UBERON:0001893!1.17e-67!34;UBERON:0002791!2.43e-65!33;UBERON:0001869!1.14e-63!32;UBERON:0003075!1.69e-57!86;UBERON:0007284!1.69e-57!86;UBERON:0002346!9.96e-57!90;UBERON:0000956!7.04e-53!25;UBERON:0000203!7.04e-53!25;UBERON:0003056!3.01e-52!61;UBERON:0002619!3.49e-51!22;UBERON:0001950!9.03e-47!20;UBERON:0007023!8.51e-44!115;UBERON:0000033!3.18e-36!123;UBERON:0000153!1.67e-35!129;UBERON:0007811!1.67e-35!129;UBERON:0000924!6.77e-34!173;UBERON:0006601!6.77e-34!173;UBERON:0004121!1.26e-33!169;UBERON:0001871!4.43e-18!7;UBERON:0000025!4.71e-17!194;UBERON:0002308!3.21e-16!9;UBERON:0000125!3.21e-16!9;UBERON:0002420!5.18e-16!9;UBERON:0007245!5.18e-16!9;UBERON:0010009!5.18e-16!9;UBERON:0010011!5.18e-16!9;UBERON:0000454!5.18e-16!9;UBERON:0002298!6.77e-15!8;UBERON:0000200!3.25e-14!6;UBERON:0004111!9.36e-13!241;UBERON:0000349!1.56e-12!5;UBERON:0001872!1.93e-12!5;UBERON:0002021!2.13e-12!5;UBERON:0001894!3.91e-12!7;UBERON:0006222!3.91e-12!7;UBERON:0009663!9.40e-12!7;UBERON:0000369!3.41e-10!4;UBERON:0002435!3.41e-10!4;UBERON:0000204!3.41e-10!4;UBERON:0010082!3.41e-10!4;UBERON:0000483!4.10e-10!309;UBERON:0000477!4.62e-10!286;UBERON:0000119!6.87e-10!312;UBERON:0003076!1.74e-09!15;UBERON:0003057!1.74e-09!15;UBERON:0000475!2.85e-09!365;UBERON:0001896!7.84e-09!3;UBERON:0005290!7.84e-09!3;UBERON:0010096!7.84e-09!3;UBERON:0000064!1.73e-08!219;UBERON:0000988!2.49e-08!3;UBERON:0006331!4.82e-08!3;UBERON:0005383!4.94e-08!3;UBERON:0005382!4.94e-08!3;UBERON:0000062!2.09e-07!511;UBERON:0002771!2.23e-07!3;UBERON:0004733!2.68e-07!12;UBERON:0002028!2.68e-07!12;UBERON:0007277!2.68e-07!12;UBERON:0000922!9.93e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.89e-59;32!UBERON:0003528;1.40e-57;34!UBERON:0002020;1.40e-57;34!UBERON:0001893;3.09e-57;34!UBERON:0002791;1.03e-54;32!UBERON:0002619;6.74e-54;22!UBERON:0000956;2.42e-52;25!UBERON:0000203;2.42e-52;25!UBERON:0002780;2.47e-48;41!UBERON:0001890;2.47e-48;41!UBERON:0001950;2.25e-47;20!UBERON:0000073;6.34e-43;53!UBERON:0002616;6.34e-43;53!UBERON:0000955;4.60e-29;68!UBERON:0001017;6.75e-27;75!UBERON:0002298;1.04e-22;6!UBERON:0001016;4.53e-20;83!UBERON:0000349;2.55e-18;5!UBERON:0001871;2.93e-18;6!UBERON:0000369;1.24e-14;4!UBERON:0002435;1.24e-14;4!UBERON:0000204;1.24e-14;4!UBERON:0000125;3.28e-14;9!UBERON:0002308;3.28e-14;9!UBERON:0002420;4.81e-14;9!UBERON:0007245;4.81e-14;9!UBERON:0010009;4.81e-14;9!UBERON:0010011;4.81e-14;9!UBERON:0000454;4.81e-14;9!UBERON:0001896;1.12e-12;3!UBERON:0005290;1.12e-12;3!UBERON:0001872;2.52e-12;5!UBERON:0002021;3.10e-12;5!UBERON:0000988;8.65e-12;3!UBERON:0005383;2.18e-11;3!UBERON:0005382;2.18e-11;3!UBERON:0004733;5.02e-11;12!UBERON:0002028;5.02e-11;12!UBERON:0007023;1.46e-10;114!UBERON:0000200;2.20e-10;6!UBERON:0004732;3.99e-10;13!UBERON:0002148;1.03e-08;2!UBERON:0006331;1.03e-08;2!UBERON:0009662;1.03e-08;2!UBERON:0001876;1.89e-08;2!UBERON:0009663;2.09e-08;7!UBERON:0001954;2.51e-08;2!UBERON:0003022;2.51e-08;2!UBERON:0002421;2.51e-08;2!UBERON:0002600;2.51e-08;2!UBERON:0001873;5.07e-08;2!UBERON:0011216;1.82e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.95e-76,53;UBERON:0002616,1.95e-76,53;UBERON:0001017,1.38e-74,81;UBERON:0001049,5.77e-72,56;UBERON:0005068,5.77e-72,56;UBERON:0006241,5.77e-72,56;UBERON:0007135,5.77e-72,56;UBERON:0002780,4.12e-67,41;UBERON:0001890,4.12e-67,41;UBERON:0003080,4.12e-67,41;UBERON:0006240,4.12e-67,41;UBERON:0001016,2.42e-66,89;UBERON:0003528,3.11e-65,34;UBERON:0002020,3.11e-65,34;UBERON:0001893,7.55e-65,34;UBERON:0000955,1.10e-64,68;UBERON:0006238,1.10e-64,68;UBERON:0001869,7.20e-64,32;UBERON:0002791,1.45e-58,32;UBERON:0002619,7.75e-54,22;UBERON:0000956,2.79e-52,25;UBERON:0000203,2.79e-52,25;UBERON:0001950,2.43e-47,20;UBERON:0003075,9.36e-47,82;UBERON:0007284,9.36e-47,82;UBERON:0002346,3.25e-44,86;UBERON:0003056,4.17e-43,61;UBERON:0010371,3.53e-35,104;UBERON:0007023,5.41e-32,114;UBERON:0004121,1.71e-30,171;UBERON:0000924,1.71e-30,171;UBERON:0006601,1.71e-30,171;UBERON:0010314,8.34e-28,132;UBERON:0011216,9.22e-24,223;UBERON:0002298,9.46e-23,6;UBERON:0000349,2.85e-18,5;UBERON:0001871,2.89e-18,6;UBERON:0000025,2.51e-15,192;UBERON:0000369,1.05e-14,4;UBERON:0002435,1.05e-14,4;UBERON:0000204,1.05e-14,4;UBERON:0010082,1.05e-14,4;UBERON:0000125,2.71e-14,9;UBERON:0002308,2.71e-14,9;UBERON:0002420,4.70e-14,9;UBERON:0007245,4.70e-14,9;UBERON:0010009,4.70e-14,9;UBERON:0010011,4.70e-14,9;UBERON:0000454,4.70e-14,9;UBERON:0001896,1.24e-12,3;UBERON:0005290,1.24e-12,3;UBERON:0010096,1.24e-12,3;UBERON:0001872,2.84e-12,5;UBERON:0002021,3.01e-12,5;UBERON:0000988,7.18e-12,3;UBERON:0005383,2.03e-11,3;UBERON:0005382,2.03e-11,3;UBERON:0004733,4.80e-11,12;UBERON:0002028,4.80e-11,12;UBERON:0007277,4.80e-11,12;UBERON:0004111,1.16e-10,240;UBERON:0000200,2.23e-10,6;UBERON:0004732,3.83e-10,13;UBERON:0002148,8.98e-09,2;UBERON:0006331,8.98e-09,2;UBERON:0009662,8.98e-09,2;UBERON:0003076,1.06e-08,15;UBERON:0003057,1.06e-08,15;UBERON:0009663,1.91e-08,7;UBERON:0001876,2.16e-08,2;UBERON:0001954,2.70e-08,2;UBERON:0003022,2.70e-08,2;UBERON:0002421,2.70e-08,2;UBERON:0002600,2.70e-08,2;UBERON:0001873,4.89e-08,2;UBERON:0010122,4.89e-08,2 | |||
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| ||
|short_description=p1@CRH | |||
}} | }} |
Latest revision as of 20:55, 18 September 2015
Short description: | p1@CRH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRH_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_uc003xvy.1_5end |
EntrezGene: | CRH |
HGNC: | 2355 |
UniProt: | P06850 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.64e-12 | 8 |