FFCP PHASE1:Hg19::chr8:104512995..104513023,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:104512995..104513023,+ to FFCP PHASE1:Hg19::chr8:104512995..104513023,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9699 | |EntrezGene=9699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17283 | |HGNC=17283 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFB6,B3KX91,F8WD47,Q9UQ26 | |UniProt=E9PFB6,B3KX91,F8WD47,Q9UQ26 | ||
|association_with_transcript=19bp_to_ENST00000504942,NM_001100117,uc003ylp.2_5end | |||
|cluster_id=chr8:104512995..104513023,+ | |||
|description=CAGE_peak_2_at_RIMS2_5end | |||
|id=chr8:104512995..104513023,+ | |||
|ontology_enrichment_celltype=CL:0000047!6.57e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.58e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.52e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.84e-14;82!UBERON:0006215;1.32e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;3.33e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,3.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!4.17e-51!94;UBERON:0001016!4.17e-51!94;UBERON:0005743!6.63e-51!86;UBERON:0001017!3.11e-49!82;UBERON:0001049!2.93e-46!57;UBERON:0005068!2.93e-46!57;UBERON:0006241!2.93e-46!57;UBERON:0007135!2.93e-46!57;UBERON:0002780!6.48e-39!41;UBERON:0001890!6.48e-39!41;UBERON:0006240!6.48e-39!41;UBERON:0000955!8.62e-39!69;UBERON:0006238!8.62e-39!69;UBERON:0002616!2.25e-38!59;UBERON:0003080!1.15e-37!42;UBERON:0003075!4.24e-34!86;UBERON:0007284!4.24e-34!86;UBERON:0002346!1.03e-31!90;UBERON:0001869!4.67e-31!32;UBERON:0001893!1.14e-30!34;UBERON:0002020!1.81e-30!34;UBERON:0003528!1.81e-30!34;UBERON:0002791!1.75e-29!33;UBERON:0003056!6.06e-29!61;UBERON:0002619!2.36e-27!22;UBERON:0001950!8.97e-25!20;UBERON:0004121!5.01e-24!169;UBERON:0000956!3.33e-23!25;UBERON:0000203!3.33e-23!25;UBERON:0000924!6.33e-23!173;UBERON:0006601!6.33e-23!173;UBERON:0000033!9.11e-22!123;UBERON:0007023!2.42e-20!115;UBERON:0000153!7.12e-20!129;UBERON:0007811!7.12e-20!129;UBERON:0000025!7.39e-10!194;UBERON:0003076!9.41e-10!15;UBERON:0003057!9.41e-10!15;UBERON:0001894!1.02e-09!7;UBERON:0006222!1.02e-09!7;UBERON:0002420!1.97e-09!9;UBERON:0007245!1.97e-09!9;UBERON:0010009!1.97e-09!9;UBERON:0010011!1.97e-09!9;UBERON:0000454!1.97e-09!9;UBERON:0000200!5.31e-09!6;UBERON:0001871!5.44e-09!7;UBERON:0002308!1.17e-08!9;UBERON:0000125!1.17e-08!9;UBERON:0000349!5.45e-08!5;UBERON:0001872!8.55e-08!5;UBERON:0002021!1.09e-07!5;UBERON:0004733!2.69e-07!12;UBERON:0002028!2.69e-07!12;UBERON:0007277!2.69e-07!12;UBERON:0000064!4.42e-07!219;UBERON:0004111!6.19e-07!241;UBERON:0009663!7.06e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.61e-50;32!UBERON:0002619;8.05e-49;22!UBERON:0002780;3.74e-48;41!UBERON:0001890;3.74e-48;41!UBERON:0002791;2.70e-47;32!UBERON:0001893;1.34e-45;34!UBERON:0003528;2.26e-45;34!UBERON:0002020;2.26e-45;34!UBERON:0001950;3.39e-44;20!UBERON:0000956;2.14e-42;25!UBERON:0000203;2.14e-42;25!UBERON:0000073;8.67e-37;53!UBERON:0002616;8.67e-37;53!UBERON:0000955;6.06e-30;68!UBERON:0001017;7.62e-28;75!UBERON:0001016;4.09e-26;83!UBERON:0001894;3.18e-16;7!UBERON:0002420;3.41e-16;9!UBERON:0007245;3.41e-16;9!UBERON:0010009;3.41e-16;9!UBERON:0010011;3.41e-16;9!UBERON:0000454;3.41e-16;9!UBERON:0000200;5.25e-15;6!UBERON:0000349;3.93e-13;5!UBERON:0001871;5.55e-13;6!UBERON:0001872;6.59e-13;5!UBERON:0002021;1.05e-12;5!UBERON:0000125;1.07e-11;9!UBERON:0002308;1.07e-11;9!UBERON:0009663;1.39e-11;7!UBERON:0003296;1.19e-10;4!UBERON:0010133;1.19e-10;4!UBERON:0011216;2.14e-10;132!UBERON:0002784;4.53e-10;4!UBERON:0000369;8.77e-10;4!UBERON:0002435;8.77e-10;4!UBERON:0000204;8.77e-10;4!UBERON:0007023;5.60e-09;114!UBERON:0001870;1.35e-08;3!UBERON:0005383;1.11e-07;3!UBERON:0005382;1.11e-07;3!UBERON:0000922;5.09e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,5.26e-68,41;UBERON:0001890,5.26e-68,41;UBERON:0003080,5.26e-68,41;UBERON:0006240,5.26e-68,41;UBERON:0001016,1.98e-67,89;UBERON:0000073,4.42e-67,53;UBERON:0002616,4.42e-67,53;UBERON:0001017,4.99e-67,81;UBERON:0001049,4.66e-66,56;UBERON:0005068,4.66e-66,56;UBERON:0006241,4.66e-66,56;UBERON:0007135,4.66e-66,56;UBERON:0000955,2.04e-63,68;UBERON:0006238,2.04e-63,68;UBERON:0001869,8.74e-57,32;UBERON:0001893,5.05e-53,34;UBERON:0002791,1.12e-52,32;UBERON:0003528,1.14e-52,34;UBERON:0002020,1.14e-52,34;UBERON:0002619,7.74e-49,22;UBERON:0003056,1.95e-45,61;UBERON:0001950,3.93e-44,20;UBERON:0003075,5.74e-44,82;UBERON:0007284,5.74e-44,82;UBERON:0000956,2.06e-42,25;UBERON:0000203,2.06e-42,25;UBERON:0002346,2.29e-41,86;UBERON:0010371,8.97e-36,104;UBERON:0004121,2.86e-31,171;UBERON:0000924,2.86e-31,171;UBERON:0006601,2.86e-31,171;UBERON:0011216,2.18e-28,223;UBERON:0007023,3.64e-25,114;UBERON:0010314,2.98e-24,132;UBERON:0001894,2.58e-16,7;UBERON:0006222,2.58e-16,7;UBERON:0002420,3.35e-16,9;UBERON:0007245,3.35e-16,9;UBERON:0010009,3.35e-16,9;UBERON:0010011,3.35e-16,9;UBERON:0000454,3.35e-16,9;UBERON:0000025,1.39e-15,192;UBERON:0000200,5.07e-15,6;UBERON:0000349,3.39e-13,5;UBERON:0001871,4.66e-13,6;UBERON:0001872,7.64e-13,5;UBERON:0002021,1.18e-12,5;UBERON:0000125,1.08e-11,9;UBERON:0002308,1.08e-11,9;UBERON:0009663,1.44e-11,7;UBERON:0003296,1.22e-10,4;UBERON:0010133,1.22e-10,4;UBERON:0002784,3.79e-10,4;UBERON:0004111,4.21e-10,240;UBERON:0000369,9.98e-10,4;UBERON:0002435,9.98e-10,4;UBERON:0000204,9.98e-10,4;UBERON:0010082,9.98e-10,4;UBERON:0001870,1.50e-08,3;UBERON:0005383,1.14e-07,3;UBERON:0005382,1.14e-07,3;UBERON:0000483,1.21e-07,306;UBERON:0000119,1.86e-07,309;UBERON:0000922,4.01e-07,592 | |||
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| ||
|short_description=p2@RIMS2 | |||
}} | }} |
Latest revision as of 00:49, 25 September 2015
Short description: | p2@RIMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RIMS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000504942, NM_001100117, uc003ylp.2_5end |
EntrezGene: | RIMS2 |
HGNC: | 17283 |
UniProt: | E9PFB6B3KX91F8WD47Q9UQ26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.52e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.17e-07 | 6 |