FFCP PHASE1:Hg19::chr7:27153269..27153285,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:27153269..27153285,+ to FFCP PHASE1:Hg19::chr7:27153269..27153285,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-269bp_to_ENST00000522193_5end | |||
|cluster_id=chr7:27153269..27153285,+ | |||
|coexpression_cluster_id=C4677 | |||
|description=CAGE_peak_3_at_ENST00000522193_5end | |||
|id=chr7:27153269..27153285,+ | |||
|ontology_enrichment_celltype=CL:0000076!2.70e-09!62;CL:0000222!5.09e-08!119;CL:0000077!6.88e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.34e-09;19!CL:0002591;4.52e-09;1!CL:0002188;5.64e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.47e-09,19;CL:0002591,4.52e-09,1;CL:0000213,5.91e-09,58;CL:0000215,5.91e-09,58;CL:0002188,6.08e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!2.67e-07!14;DOID:305!3.39e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3347;5.48e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,5.70e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002100!4.60e-16!216;UBERON:0003104!2.92e-14!238;UBERON:0009142!2.92e-14!238;UBERON:0005177!1.85e-13!107;UBERON:0003064!9.53e-13!37;UBERON:0003886!5.02e-11!63;UBERON:0005256!7.05e-11!143;UBERON:0006554!1.04e-10!44;UBERON:0000466!1.31e-10!126;UBERON:0001008!2.70e-10!45;UBERON:0009569!1.06e-09!113;UBERON:0004921!2.07e-09!129;UBERON:0004185!2.07e-09!129;UBERON:0000464!2.42e-09!104;UBERON:0000489!2.61e-09!32;UBERON:0002553!6.07e-09!70;UBERON:0000926!1.61e-08!448;UBERON:0004120!1.61e-08!448;UBERON:0006603!1.61e-08!448;UBERON:0002417!1.64e-08!61;UBERON:0000916!1.64e-08!61;UBERON:0005172!5.13e-08!55;UBERON:0005173!5.13e-08!55;UBERON:0000481!6.82e-08!347;UBERON:0001007!6.88e-08!155;UBERON:0001555!6.88e-08!155;UBERON:0007026!6.88e-08!155;UBERON:0003914!1.11e-07!118;UBERON:0006555!2.82e-07!17;UBERON:0005103!2.82e-07!17;UBERON:0000083!2.82e-07!17;UBERON:0009201!2.82e-07!17;UBERON:0004819!2.82e-07!17;UBERON:0006553!2.82e-07!17;UBERON:0003074!2.82e-07!17;UBERON:0003060!2.82e-07!17;UBERON:0002113!4.18e-07!27;UBERON:0003918!4.18e-07!27;UBERON:0005095!4.18e-07!27;UBERON:0007687!4.18e-07!27;UBERON:0000077!4.64e-07!130;UBERON:0005156!5.80e-07!59;UBERON:0000990!5.80e-07!59;UBERON:0000490!6.42e-07!138;UBERON:0004876!6.72e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;1.17e-08;1!UBERON:0000997;1.17e-08;1!UBERON:0005056;1.17e-08;1!UBERON:0004176;1.17e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005103,4.83e-09,8;UBERON:0000083,4.83e-09,8;UBERON:0009201,4.83e-09,8;UBERON:0006553,4.83e-09,8;UBERON:0003074,4.83e-09,8;UBERON:0003060,4.83e-09,8;UBERON:0001301,6.65e-09,1;UBERON:0000997,1.91e-08,1;UBERON:0005056,1.91e-08,1;UBERON:0000080,4.34e-08,9;UBERON:0002120,4.34e-08,9;UBERON:0004875,4.34e-08,9;UBERON:0005721,4.34e-08,9;UBERON:0005754,4.34e-08,9;UBERON:0007297,4.34e-08,9;UBERON:0006555,1.09e-07,16;UBERON:0004819,1.09e-07,16;UBERON:0002113,5.27e-07,26;UBERON:0003918,5.27e-07,26;UBERON:0011143,5.27e-07,26;UBERON:0005095,5.27e-07,26;UBERON:0007687,5.27e-07,26 | |||
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| ||
|short_description=p3@ENST00000522193 | |||
}} | }} |
Latest revision as of 09:00, 31 July 2015
Short description: | p3@ENST00000522193 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000522193_5end |
Coexpression cluster: | C4677_lung_mesothelioma_Renal_liposarcoma_pharyngeal_Nucleus_Endothelial |
Association with transcript: | -269bp_to_ENST00000522193_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.47e-09 | 19 |
smooth muscle cell of the pulmonary artery | 4.52e-09 | 1 |
lining cell | 5.91e-09 | 58 |
barrier cell | 5.91e-09 | 58 |
glomerular endothelial cell | 6.08e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mesonephric epithelium | 4.83e-09 | 8 |
mesonephric tubule | 4.83e-09 | 8 |
nephric duct | 4.83e-09 | 8 |
renal duct | 4.83e-09 | 8 |
mesonephric duct | 4.83e-09 | 8 |
pronephric duct | 4.83e-09 | 8 |
epididymis | 6.65e-09 | 1 |
mammalian vulva | 1.91e-08 | 1 |
external female genitalia | 1.91e-08 | 1 |
mesonephros | 4.34e-08 | 9 |
pronephros | 4.34e-08 | 9 |
nephrogenic cord | 4.34e-08 | 9 |
pronephric mesoderm | 4.34e-08 | 9 |
rostral part of nephrogenic cord | 4.34e-08 | 9 |
presumptive pronephric mesoderm | 4.34e-08 | 9 |
excretory tube | 1.09e-07 | 16 |
kidney epithelium | 1.09e-07 | 16 |
kidney | 5.27e-07 | 26 |
kidney mesenchyme | 5.27e-07 | 26 |
upper urinary tract | 5.27e-07 | 26 |
kidney rudiment | 5.27e-07 | 26 |
kidney field | 5.27e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 5.70e-09 | 1 |