FFCP PHASE1:Hg19::chr6:7579595..7579685,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:7579595..7579685,+ to FFCP PHASE1:Hg19::chr6:7579595..7579685,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1832 | |EntrezGene=1832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3052 | |HGNC=3052 | ||
|TSSclassifier=strong | |||
|UniProt=P15924 | |UniProt=P15924 | ||
|association_with_transcript=-97bp_to_J05211_5end | |||
|cluster_id=chr6:7579595..7579685,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_5_at_DSP_5end | |||
|id=chr6:7579595..7579685,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.81e-30!254;CL:0000223!4.44e-16!59;CL:0002076!2.47e-14!43;CL:0002251!1.98e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.44e-11;42!CL:0002251;4.18e-10;20!CL:0000039;8.98e-07;7!CL:0000586;8.98e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.07e-26,253;CL:0000223,1.30e-16,58;CL:0002076,4.17e-14,42;CL:0002251,2.61e-10,20;CL:0000039,6.09e-07,7;CL:0000586,6.09e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000223;1.86e-09;58 | |||
|ontology_enrichment_disease=DOID:305!8.38e-24!106;DOID:0050687!4.49e-17!143;DOID:162!5.07e-08!235;DOID:299!1.15e-07!25;DOID:193!1.98e-07!29;DOID:14566!2.95e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:305;5.02e-08;106!DOID:299;2.97e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.82e-21,106;DOID:0050687,2.12e-15,143;DOID:299,2.07e-07,25;DOID:162,2.77e-07,235;DOID:1749,9.28e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.78e-17!169;UBERON:0000925!1.78e-17!169;UBERON:0006595!1.78e-17!169;UBERON:0001007!3.64e-14!155;UBERON:0001555!3.64e-14!155;UBERON:0007026!3.64e-14!155;UBERON:0000077!4.69e-12!130;UBERON:0004921!9.79e-12!129;UBERON:0004185!9.79e-12!129;UBERON:0001041!3.23e-10!98;UBERON:0001004!3.73e-10!72;UBERON:0000062!1.80e-09!511;UBERON:0000466!3.80e-09!126;UBERON:0000468!1.76e-08!659;UBERON:0001048!4.22e-08!168;UBERON:0005911!1.44e-07!82;UBERON:0002530!3.24e-07!59;UBERON:0000464!5.18e-07!104;UBERON:0000065!5.61e-07!53;UBERON:0002365!5.96e-07!31;UBERON:0002330!5.96e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;2.70e-08;31!UBERON:0002330;2.70e-08;31!UBERON:0004921;1.07e-07;33!UBERON:0001041;2.18e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.46e-15,160;UBERON:0000925,1.46e-15,160;UBERON:0006595,1.46e-15,160;UBERON:0004921,4.62e-13,118;UBERON:0001007,1.09e-12,145;UBERON:0001555,1.09e-12,145;UBERON:0007026,1.09e-12,145;UBERON:0001041,2.43e-11,87;UBERON:0001004,5.10e-09,74;UBERON:0002365,1.91e-08,31;UBERON:0002330,1.91e-08,31;UBERON:0002530,1.30e-07,59 | |||
|phase1_expression=2.54349730978779,7.49351833618441,0.704772020479856,3.00219895059391,0.446961094427288,0.872338524100369,2.53299878168311,0,0,0.491467873003018,0.697801167972428,0.873765488520689,1.05506791291381,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0.154816123316076,0.919421224478927,1.8072355126695,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.614843499851882,0.130979075497713,0.728590576585084,7.41568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95249646038536,0,0,0,0,0,0,0,0,0,0,3.92484646928281,8.44852317882041,0.379891534993739,0.132409180813219,0,0,0,1.06748995729705,3.20667812942308,0,0.134710672069688,0,0,1.15235184896,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0,1.18800285728205,0.989067717114227,0,0,0.168336113954066,0.125118519871964,0,0,0.919463387397059,0.300476117813194,0,2.69084453533293,0,0.635795703478686,4.50136644126603,0.206105058476878,2.83404594050192,1.48893485065272,2.70042131586026,0.68205903612839,3.5340728394176,0.460249493211497,1.61646056818812,3.90510551768276,0.604512589365842,0.339121184620975,3.67195621010264,3.81844568827169,0.860413786167011,1.34171076742555,1.59035721985782,1.85910308591229,2.69518743039963,3.02785021050754,2.55484151353081,0,1.28648187638577,0,0.928735856063958,3.60939740834793,4.61396520155391,2.02301628093722,5.3022426574366,3.97058301836618,4.13970943775572,3.32178866755535,3.37078270400411,1.56977172100277,2.69323009862473,0,0,0.4115740113314,0,3.80265104465493,5.89696330006576,5.90789906681404,0,2.95172252503473,1.02940686179115,14.4870376739386,0,17.2909832548005,13.3327361028283,0.325808305310325,0,0,0.231860809950154,0.939269553886573,0.144366447761074,0.462985512576611,2.09279567458058,4.74122638775565,2.57545848628462,0,0,0.148631162288728,0.93733833986777,10.2469098201304,7.08875486211932,10.1201130654219,8.13775027839093,3.83382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,1.86156681609409,2.08014873822732,0,1.41849132023278,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,3.39908170018994,0,0,0,7.90762023122223,9.18895486672911,1.42636905040718,1.73737568001095,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,8.31883446123229,6.78030157429215,5.51958452618771,3.27995961979597,0.601892199455438,0,0,6.64225598535437,0.737476674166813,0,0,0,0,0,0,0.303127571446259,1.66435439510497,1.20956117331872,1.98486246255021,6.59886485138669,5.05188169979532,1.02511319404561,2.04682899626681,7.07757253031873,4.45254199334973,0.308419387605311,1.06537035187876,0,0,0.232420756919918,3.62578348774867,8.02025881213139,50.8287058926148,0,0.182091168006717,0,0.902399225814824,2.6185214615501,0,0,2.53323909342902,0,0,1.29549549661284,0,0.541892875087706,0.501689773854853,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0.512900250232778,0.656029291399411,0,1.44257416306811,0,0,2.29706215198469,16.9015663969496,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.534192213880424,7.60310610660499,7.11103249250893,7.2739246121913,8.69956915357729,1.85938219718914,0.31481234683064,0,0,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.974853958525138,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,1.05553817648832,0.329294892959902,0,0,1.34710957815717,0.670302275535787,0,1.7887322147588,0.43050537267123,5.05414427002877,3.10401107475673,7.58087220682966,0,0,0,0,0,0,0,0,4.05931470284398,0,13.4772118789567,0,0,0,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8071081061233,0.146508179271894,0,0,0.852408440419239,10.2660128437207,0.890894042497916,31.3303916141217,0.994147647766298,0.562677665642051,0.222617410045812,0,0.211125408127993,0.597743964753209,0.552567831062295,26.9568040204075,0.715880777515084,0,4.0435146396035,1.07842021376792,1.79021174675609,0,0.0986434056369336,0,2.22273980289274,0,0.278304294485554,0,8.85454387689793,0.0874599999961957,0,1.4793148277115,1.77977555204936,18.674626859667,0,0,0.347249989866585,0,0,0,0.442317039724898,0,1.31631238292384,0.544692317594951,11.0144757980097,2.30850775511391,0,4.84184199214926,11.5787361288606,24.6629534262958,8.93203247249374,0.366390373607449,30.9160170090808,0,0,0,0,0,0,0,0,3.79796516150449,0.816164040795739,1.97894300007517,1.29833183845255,0,1.68069372556344,2.4441205797345,0,0,0,0.067401132980677,0,0,0,1.9566461893209,0,0.789168805698781,7.25944296291983,0,1.13735843331278,0.150323419414493,0.829505531177977,0,0,0,0,0.569219092059585,0,13.8847790668105,4.11568069140386,1.82824333818845,1.7472666824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| |phase1_expression=2.54349730978779,7.49351833618441,0.704772020479856,3.00219895059391,0.446961094427288,0.872338524100369,2.53299878168311,0,0,0.491467873003018,0.697801167972428,0.873765488520689,1.05506791291381,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0.154816123316076,0.919421224478927,1.8072355126695,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.614843499851882,0.130979075497713,0.728590576585084,7.41568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95249646038536,0,0,0,0,0,0,0,0,0,0,3.92484646928281,8.44852317882041,0.379891534993739,0.132409180813219,0,0,0,1.06748995729705,3.20667812942308,0,0.134710672069688,0,0,1.15235184896,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0.122834317311768,0,1.18800285728205,0.989067717114227,0,0,0.168336113954066,0.125118519871964,0,0,0.919463387397059,0.300476117813194,0,2.69084453533293,0,0.635795703478686,4.50136644126603,0.206105058476878,2.83404594050192,1.48893485065272,2.70042131586026,0.68205903612839,3.5340728394176,0.460249493211497,1.61646056818812,3.90510551768276,0.604512589365842,0.339121184620975,3.67195621010264,3.81844568827169,0.860413786167011,1.34171076742555,1.59035721985782,1.85910308591229,2.69518743039963,3.02785021050754,2.55484151353081,0,1.28648187638577,0,0.928735856063958,3.60939740834793,4.61396520155391,2.02301628093722,5.3022426574366,3.97058301836618,4.13970943775572,3.32178866755535,3.37078270400411,1.56977172100277,2.69323009862473,0,0,0.4115740113314,0,3.80265104465493,5.89696330006576,5.90789906681404,0,2.95172252503473,1.02940686179115,14.4870376739386,0,17.2909832548005,13.3327361028283,0.325808305310325,0,0,0.231860809950154,0.939269553886573,0.144366447761074,0.462985512576611,2.09279567458058,4.74122638775565,2.57545848628462,0,0,0.148631162288728,0.93733833986777,10.2469098201304,7.08875486211932,10.1201130654219,8.13775027839093,3.83382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0,0,0,1.86156681609409,2.08014873822732,0,1.41849132023278,0,0.142977993658148,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,3.39908170018994,0,0,0,7.90762023122223,9.18895486672911,1.42636905040718,1.73737568001095,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,8.31883446123229,6.78030157429215,5.51958452618771,3.27995961979597,0.601892199455438,0,0,6.64225598535437,0.737476674166813,0,0,0,0,0,0,0.303127571446259,1.66435439510497,1.20956117331872,1.98486246255021,6.59886485138669,5.05188169979532,1.02511319404561,2.04682899626681,7.07757253031873,4.45254199334973,0.308419387605311,1.06537035187876,0,0,0.232420756919918,3.62578348774867,8.02025881213139,50.8287058926148,0,0.182091168006717,0,0.902399225814824,2.6185214615501,0,0,2.53323909342902,0,0,1.29549549661284,0,0.541892875087706,0.501689773854853,0.254876273045038,0.831076008928724,0.671624264166535,0,0,0.512900250232778,0.656029291399411,0,1.44257416306811,0,0,2.29706215198469,16.9015663969496,0,0,0,0,0,0,0.145016693914229,0.0852266274161009,0.534192213880424,7.60310610660499,7.11103249250893,7.2739246121913,8.69956915357729,1.85938219718914,0.31481234683064,0,0,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.974853958525138,1.05650146756755,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,1.05553817648832,0.329294892959902,0,0,1.34710957815717,0.670302275535787,0,1.7887322147588,0.43050537267123,5.05414427002877,3.10401107475673,7.58087220682966,0,0,0,0,0,0,0,0,4.05931470284398,0,13.4772118789567,0,0,0,0.797131363644112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8071081061233,0.146508179271894,0,0,0.852408440419239,10.2660128437207,0.890894042497916,31.3303916141217,0.994147647766298,0.562677665642051,0.222617410045812,0,0.211125408127993,0.597743964753209,0.552567831062295,26.9568040204075,0.715880777515084,0,4.0435146396035,1.07842021376792,1.79021174675609,0,0.0986434056369336,0,2.22273980289274,0,0.278304294485554,0,8.85454387689793,0.0874599999961957,0,1.4793148277115,1.77977555204936,18.674626859667,0,0,0.347249989866585,0,0,0,0.442317039724898,0,1.31631238292384,0.544692317594951,11.0144757980097,2.30850775511391,0,4.84184199214926,11.5787361288606,24.6629534262958,8.93203247249374,0.366390373607449,30.9160170090808,0,0,0,0,0,0,0,0,3.79796516150449,0.816164040795739,1.97894300007517,1.29833183845255,0,1.68069372556344,2.4441205797345,0,0,0,0.067401132980677,0,0,0,1.9566461893209,0,0.789168805698781,7.25944296291983,0,1.13735843331278,0.150323419414493,0.829505531177977,0,0,0,0,0.569219092059585,0,13.8847790668105,4.11568069140386,1.82824333818845,1.7472666824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| ||
|short_description=p5@DSP | |||
}} | }} |
Latest revision as of 19:24, 19 September 2015
Short description: | p5@DSP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DSP_5end |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | -97bp_to_J05211_5end |
EntrezGene: | DSP |
HGNC: | 3052 |
UniProt: | P15924 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.07e-26 | 253 |
endodermal cell | 1.30e-16 | 58 |
endo-epithelial cell | 4.17e-14 | 42 |
epithelial cell of alimentary canal | 2.61e-10 | 20 |
germ line cell | 6.09e-07 | 7 |
germ cell | 6.09e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.46e-15 | 160 |
endoderm | 1.46e-15 | 160 |
presumptive endoderm | 1.46e-15 | 160 |
subdivision of digestive tract | 4.62e-13 | 118 |
digestive system | 1.09e-12 | 145 |
digestive tract | 1.09e-12 | 145 |
primitive gut | 1.09e-12 | 145 |
foregut | 2.43e-11 | 87 |
respiratory system | 5.10e-09 | 74 |
exocrine gland | 1.91e-08 | 31 |
exocrine system | 1.91e-08 | 31 |
gland | 1.30e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.82e-21 | 106 |
cell type cancer | 2.12e-15 | 143 |
adenocarcinoma | 2.07e-07 | 25 |
cancer | 2.77e-07 | 235 |
squamous cell carcinoma | 9.28e-07 | 14 |