FFCP PHASE1:Hg19::chr6:55443831..55443908,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:55443831..55443908,- to FFCP PHASE1:Hg19::chr6:55443831..55443908,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54511 | |EntrezGene=54511 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21359 | |HGNC=21359 | ||
|TSSclassifier=strong | |||
|UniProt=G5E9S9,B7Z4D4 | |UniProt=G5E9S9,B7Z4D4 | ||
|association_with_transcript=0bp_to_ENST00000358072,ENST00000370852,ENST00000428842,ENST00000508459_5end | |||
|cluster_id=chr6:55443831..55443908,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_HMGCLL1_5end | |||
|id=chr6:55443831..55443908,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-18;82!UBERON:0006241;2.85e-07;3!UBERON:0003057;2.85e-07;3!UBERON:0006215;3.97e-07;3!UBERON:0002532;9.02e-07;206!UBERON:0010316;9.02e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.06e-64!115;UBERON:0001049!4.21e-52!57;UBERON:0005068!4.21e-52!57;UBERON:0006241!4.21e-52!57;UBERON:0007135!4.21e-52!57;UBERON:0001017!2.34e-50!82;UBERON:0005743!3.46e-50!86;UBERON:0002616!3.18e-47!59;UBERON:0000073!1.06e-45!94;UBERON:0001016!1.06e-45!94;UBERON:0003075!5.79e-44!86;UBERON:0007284!5.79e-44!86;UBERON:0003080!3.36e-43!42;UBERON:0002780!1.25e-42!41;UBERON:0001890!1.25e-42!41;UBERON:0006240!1.25e-42!41;UBERON:0000955!4.37e-42!69;UBERON:0006238!4.37e-42!69;UBERON:0002346!7.87e-41!90;UBERON:0003056!4.92e-36!61;UBERON:0002020!6.63e-36!34;UBERON:0003528!6.63e-36!34;UBERON:0001893!7.00e-36!34;UBERON:0002791!8.62e-35!33;UBERON:0001869!3.54e-34!32;UBERON:0000153!3.51e-32!129;UBERON:0007811!3.51e-32!129;UBERON:0000033!6.76e-31!123;UBERON:0004121!1.91e-28!169;UBERON:0000924!4.50e-27!173;UBERON:0006601!4.50e-27!173;UBERON:0000956!1.08e-26!25;UBERON:0000203!1.08e-26!25;UBERON:0002619!3.22e-25!22;UBERON:0001950!3.61e-23!20;UBERON:0000481!3.98e-21!347;UBERON:0000475!8.78e-19!365;UBERON:0000119!6.79e-17!312;UBERON:0000483!6.89e-17!309;UBERON:0000477!1.39e-16!286;UBERON:0000025!1.19e-15!194;UBERON:0000922!1.96e-15!612;UBERON:0000064!4.30e-15!219;UBERON:0000468!9.39e-15!659;UBERON:0004111!1.76e-13!241;UBERON:0000062!1.08e-12!511;UBERON:0002050!1.57e-12!605;UBERON:0005423!1.57e-12!605;UBERON:0000923!4.26e-12!604;UBERON:0005291!4.26e-12!604;UBERON:0006598!4.26e-12!604;UBERON:0002532!4.26e-12!604;UBERON:0002308!1.48e-10!9;UBERON:0002420!1.48e-10!9;UBERON:0000125!1.48e-10!9;UBERON:0007245!1.48e-10!9;UBERON:0010009!1.48e-10!9;UBERON:0010011!1.48e-10!9;UBERON:0000454!1.48e-10!9;UBERON:0003076!3.55e-10!15;UBERON:0003057!3.55e-10!15;UBERON:0000467!4.20e-10!625;UBERON:0000480!5.24e-10!626;UBERON:0001871!2.48e-09!7;UBERON:0002298!9.43e-09!8;UBERON:0009663!1.18e-08!7;UBERON:0001894!4.82e-08!7;UBERON:0006222!4.82e-08!7;UBERON:0004732!6.99e-08!13;UBERON:0000200!9.11e-08!6;UBERON:0004733!3.34e-07!12;UBERON:0002028!3.34e-07!12;UBERON:0007277!3.34e-07!12;UBERON:0002021!6.27e-07!5;UBERON:0001872!9.04e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.04e-47;41!UBERON:0001890;1.04e-47;41!UBERON:0003528;4.06e-47;34!UBERON:0002020;4.06e-47;34!UBERON:0001869;4.14e-47;32!UBERON:0001893;6.49e-47;34!UBERON:0002791;7.73e-47;32!UBERON:0000073;2.78e-44;53!UBERON:0002616;2.78e-44;53!UBERON:0002619;1.86e-42;22!UBERON:0000956;1.20e-39;25!UBERON:0000203;1.20e-39;25!UBERON:0001950;7.04e-39;20!UBERON:0000955;2.92e-29;68!UBERON:0001017;1.85e-28;75!UBERON:0001016;6.04e-25;83!UBERON:0007023;4.09e-18;114!UBERON:0000125;3.97e-17;9!UBERON:0002308;3.97e-17;9!UBERON:0002420;4.41e-17;9!UBERON:0007245;4.41e-17;9!UBERON:0010009;4.41e-17;9!UBERON:0010011;4.41e-17;9!UBERON:0000454;4.41e-17;9!UBERON:0009663;8.22e-14;7!UBERON:0004732;1.66e-13;13!UBERON:0001871;2.52e-13;6!UBERON:0001894;1.07e-12;7!UBERON:0004733;2.49e-12;12!UBERON:0002028;2.49e-12;12!UBERON:0000200;3.04e-12;6!UBERON:0002298;1.02e-11;6!UBERON:0000922;4.82e-11;49!UBERON:0011216;5.22e-11;132!UBERON:0002021;8.42e-11;5!UBERON:0001872;1.52e-10;5!UBERON:0000349;2.68e-10;5!UBERON:0000369;2.42e-09;4!UBERON:0002435;2.42e-09;4!UBERON:0000204;2.42e-09;4!UBERON:0003296;3.05e-08;4!UBERON:0010133;3.05e-08;4!UBERON:0002680;6.45e-08;9!UBERON:0001895;6.45e-08;9!UBERON:0002784;9.09e-08;4!UBERON:0010314;1.56e-07;132!UBERON:0005383;1.73e-07;3!UBERON:0005382;1.73e-07;3!UBERON:0002240;2.85e-07;3!UBERON:0005174;2.85e-07;3!UBERON:0001137;2.85e-07;3!UBERON:0001870;3.78e-07;3!UBERON:0000988;6.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.11e-84,56;UBERON:0005068,5.11e-84,56;UBERON:0006241,5.11e-84,56;UBERON:0007135,5.11e-84,56;UBERON:0000073,4.87e-78,53;UBERON:0002616,4.87e-78,53;UBERON:0001017,2.64e-75,81;UBERON:0001016,2.83e-68,89;UBERON:0002780,4.31e-67,41;UBERON:0001890,4.31e-67,41;UBERON:0003080,4.31e-67,41;UBERON:0006240,4.31e-67,41;UBERON:0000955,4.42e-65,68;UBERON:0006238,4.42e-65,68;UBERON:0007023,1.08e-62,114;UBERON:0003075,1.69e-61,82;UBERON:0007284,1.69e-61,82;UBERON:0002346,7.56e-58,86;UBERON:0003528,1.90e-55,34;UBERON:0002020,1.90e-55,34;UBERON:0001893,2.08e-55,34;UBERON:0001869,1.93e-52,32;UBERON:0002791,5.06e-52,32;UBERON:0010371,8.75e-47,104;UBERON:0003056,1.37e-45,61;UBERON:0002619,1.87e-42,22;UBERON:0000956,1.41e-39,25;UBERON:0000203,1.41e-39,25;UBERON:0010314,3.70e-39,132;UBERON:0001950,6.74e-39,20;UBERON:0004121,1.59e-34,171;UBERON:0000924,1.59e-34,171;UBERON:0006601,1.59e-34,171;UBERON:0011216,1.02e-33,223;UBERON:0000025,2.99e-24,192;UBERON:0004111,3.38e-18,240;UBERON:0003076,1.74e-17,15;UBERON:0003057,1.74e-17,15;UBERON:0002420,4.55e-17,9;UBERON:0000125,4.55e-17,9;UBERON:0007245,4.55e-17,9;UBERON:0002308,4.55e-17,9;UBERON:0010009,4.55e-17,9;UBERON:0010011,4.55e-17,9;UBERON:0000454,4.55e-17,9;UBERON:0000483,2.99e-14,306;UBERON:0000119,6.25e-14,309;UBERON:0009663,8.64e-14,7;UBERON:0004732,1.86e-13,13;UBERON:0001871,2.50e-13,6;UBERON:0001894,9.69e-13,7;UBERON:0006222,9.69e-13,7;UBERON:0004733,2.82e-12,12;UBERON:0002028,2.82e-12,12;UBERON:0007277,2.82e-12,12;UBERON:0000200,2.90e-12,6;UBERON:0002298,1.15e-11,6;UBERON:0002021,7.94e-11,5;UBERON:0001872,1.49e-10,5;UBERON:0000349,2.71e-10,5;UBERON:0000922,1.38e-09,592;UBERON:0000369,2.47e-09,4;UBERON:0002435,2.47e-09,4;UBERON:0000204,2.47e-09,4;UBERON:0010082,2.47e-09,4;UBERON:0003296,2.85e-08,4;UBERON:0010133,2.85e-08,4;UBERON:0002050,3.40e-08,564;UBERON:0005423,3.57e-08,581;UBERON:0000923,6.15e-08,560;UBERON:0010316,6.15e-08,560;UBERON:0005291,6.15e-08,560;UBERON:0006598,6.15e-08,560;UBERON:0010317,6.15e-08,560;UBERON:0002532,6.15e-08,560;UBERON:0002680,7.29e-08,9;UBERON:0001895,7.29e-08,9;UBERON:0010092,7.29e-08,9;UBERON:0002784,8.53e-08,4;UBERON:0005383,1.80e-07,3;UBERON:0005382,1.80e-07,3;UBERON:0002240,2.71e-07,3;UBERON:0005174,2.71e-07,3;UBERON:0001137,2.71e-07,3;UBERON:0001870,3.89e-07,3;UBERON:0000988,7.61e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.98026164736075,0.994192127183747,0,0,0,0,0,0,0,1.14494394852423,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.614843499851882,3.20898734969396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0.70296429550139,0,0,0,0.117434498643765,0,0,0.204154171254893,0,0.619954687054593,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.530119073285941,1.2781333715647,1.45125477021519,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0,0,0,3.1608175918371,2.57545848628462,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,6.50699269288109,3.86644406388848,8.04078073604874,1.91381625495949,0,0,0,0.981531933753119,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.308061348417659,0,0,1.37217117560738,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0.984043937099117,0,2.26690225624989,0,0.082509499920588,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0.322260734604821,0.435050081742686,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0.54907405947211,0.353437207037059,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,9.94147647766298,9.56552031591487,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0.493217028184668,0,0,10.6626602070474,13.5441423316303,19.9613798001194,2.60427761085233,0,0.724999575434793,0,0,0.472775363535873,6.20538071834636,0,0,15.0576035588353,20.7425874435702,16.7839909948792,12.4954563722284,15.0729285666309,12.5049676377764,0,0,1.30815439456455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.973033209536731,2.4441205797345,0,0,0,4.51587590970536,6.42062117839031,6.32514003458416,0,0.586993856796269,0,0.789168805698781,6.04953580243319,10.7125466570672,2.59064976476801,1.50323419414493,0.829505531177977,0,0,0,0,0.284609546029793,0,0,0,0,1.39781334593624,0.171986032471617,0,0,0,0.775912131907355,0,7.23138370497704,0,0,20.3227655018371,0,0,1.28071796843612,0.599428828746391,0,0,0,0,0,0,0,0,0,0,11.407985485486,4.10716136675979,0,0,0,6.42349522926185,2.97908551215189,0,1.19807400299395,0,0.89268582976749,4.36692571163721,0,0,0,0,0,0,0,18.290282865614,7.08257711780193,0,0.962776056180637,0,0,0,18.4071156673815,0,0.157611414598396,0.786818822024972,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.293104467356165,0,12.1525978979858,7.00832789236257,0.342173675768659,0.704815022316672,2.88326013932776,13.0479573232723,3.72815149812476,0.496166021811951,0,0,0,0.544017803369474,0,0,0.655745261419609,0,16.8352954193727,17.9378609405886,9.13893794157449,5.16068276121064,7.32131740143225,12.9160518118078,0,0,0,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84853991371077,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.54604819096007,0,0,0,0,0,0,18.4131272105658,0,3.9811912055916,15.6077016984397,15.5866233958143,8.46059453002902,18.6655891459087,31.5089620277148,12.5174626960234,14.2098568156029,1.42769420259154,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0.163771917510097,0,14.3855055237181,10.15401528198,11.7811474005675,13.3807359509143,20.7850427426923,0,2.48105589194647,0,0.127762427639595,11.249738553444,5.71682327772001,7.89055285507621,14.7980424378343,1.86274977341542,0,0,18.0119792388604,12.5625997505042,0.118193840883968,0,4.39561319962878,23.0959917176523,0,6.39211104356647,0,0,5.78960007830916,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0,0,0,1.29485767437579,0.307988420568741,4.6392577253528,5.34282092365053,0,0,0,1.35535298446752,0.769583617218004,0.301925687133347,0.308696632431779,0.874238242015829,0,0.490296643507811,0.471353094203252,18.6493043759198,13.961180815373,17.3288848309194,0,0.0939839179798536,0.322289439867886,0,0,0,0,1.46067277649303,1.83491713361816,3.72682916193773,0.788857810965923,10.2667150188281,15.7086248522536,2.645134202577,0,0,0,0,0,0,0.101988829741982,0,0,0,3.33426272160253,3.21556956187414,4.97501663675268,5.58538177654234,2.34557380091079,5.23741749220229,0.12917781967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| ||
|short_description=p1@HMGCLL1 | |||
}} | }} |
Latest revision as of 08:26, 19 September 2015
Short description: | p1@HMGCLL1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HMGCLL1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000358072, ENST00000370852, ENST00000428842, ENST00000508459_5end |
EntrezGene: | HMGCLL1 |
HGNC: | 21359 |
UniProt: | G5E9S9B7Z4D4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data