FFCP PHASE1:Hg19::chr5:57878932..57878947,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:57878932..57878947,+ to FFCP PHASE1:Hg19::chr5:57878932..57878947,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115827 | |EntrezGene=115827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30269 | |HGNC=30269 | ||
|TSSclassifier=strong | |||
|UniProt=Q96E17 | |UniProt=Q96E17 | ||
|association_with_transcript=0bp_to_NM_138453,uc003jrp.2_5end | |||
|cluster_id=chr5:57878932..57878947,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_RAB3C_5end | |||
|id=chr5:57878932..57878947,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.04e-24;82!UBERON:0006215;2.42e-08;3!UBERON:0006241;1.10e-07;3!UBERON:0003057;1.10e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.28e-61!57;UBERON:0005068!1.28e-61!57;UBERON:0006241!1.28e-61!57;UBERON:0007135!1.28e-61!57;UBERON:0007023!1.45e-59!115;UBERON:0001017!1.48e-58!82;UBERON:0005743!5.34e-57!86;UBERON:0000073!1.61e-55!94;UBERON:0001016!1.61e-55!94;UBERON:0002616!2.78e-51!59;UBERON:0000955!3.34e-51!69;UBERON:0006238!3.34e-51!69;UBERON:0002780!5.03e-50!41;UBERON:0001890!5.03e-50!41;UBERON:0006240!5.03e-50!41;UBERON:0003080!1.59e-48!42;UBERON:0003075!1.96e-47!86;UBERON:0007284!1.96e-47!86;UBERON:0002346!1.83e-44!90;UBERON:0002020!3.70e-40!34;UBERON:0003528!3.70e-40!34;UBERON:0001893!4.75e-40!34;UBERON:0002791!1.92e-38!33;UBERON:0001869!1.26e-37!32;UBERON:0003056!5.78e-33!61;UBERON:0002619!3.42e-32!22;UBERON:0001950!3.49e-29!20;UBERON:0000956!1.54e-27!25;UBERON:0000203!1.54e-27!25;UBERON:0004121!1.52e-26!169;UBERON:0000924!1.92e-25!173;UBERON:0006601!1.92e-25!173;UBERON:0000033!1.18e-24!123;UBERON:0000153!1.22e-23!129;UBERON:0007811!1.22e-23!129;UBERON:0000025!4.28e-19!194;UBERON:0004111!1.56e-14!241;UBERON:0002308!3.95e-14!9;UBERON:0000125!3.95e-14!9;UBERON:0002420!4.47e-14!9;UBERON:0007245!4.47e-14!9;UBERON:0010009!4.47e-14!9;UBERON:0010011!4.47e-14!9;UBERON:0000454!4.47e-14!9;UBERON:0003076!8.42e-14!15;UBERON:0003057!8.42e-14!15;UBERON:0001894!2.79e-11!7;UBERON:0006222!2.79e-11!7;UBERON:0009663!3.45e-11!7;UBERON:0000477!3.66e-11!286;UBERON:0000200!1.05e-10!6;UBERON:0004733!3.62e-10!12;UBERON:0002028!3.62e-10!12;UBERON:0007277!3.62e-10!12;UBERON:0001871!5.43e-10!7;UBERON:0002298!1.11e-09!8;UBERON:0000483!1.67e-09!309;UBERON:0000119!3.16e-09!312;UBERON:0004732!3.33e-09!13;UBERON:0001872!4.15e-09!5;UBERON:0000349!4.42e-09!5;UBERON:0002021!1.07e-08!5;UBERON:0000064!3.65e-08!219;UBERON:0000922!9.39e-08!612;UBERON:0000369!1.68e-07!4;UBERON:0002435!1.68e-07!4;UBERON:0000204!1.68e-07!4;UBERON:0010082!1.68e-07!4;UBERON:0000062!3.46e-07!511;UBERON:0003296!6.54e-07!4;UBERON:0010133!6.54e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.73e-57;41!UBERON:0001890;2.73e-57;41!UBERON:0001893;6.50e-55;34!UBERON:0003528;1.05e-54;34!UBERON:0002020;1.05e-54;34!UBERON:0000073;2.42e-54;53!UBERON:0002616;2.42e-54;53!UBERON:0001869;4.19e-54;32!UBERON:0002791;1.45e-53;32!UBERON:0002619;3.64e-51;22!UBERON:0001950;2.56e-46;20!UBERON:0000956;1.79e-44;25!UBERON:0000203;1.79e-44;25!UBERON:0000955;1.97e-38;68!UBERON:0001017;2.44e-36;75!UBERON:0001016;7.63e-34;83!UBERON:0000125;9.94e-22;9!UBERON:0002308;9.94e-22;9!UBERON:0002420;1.21e-21;9!UBERON:0007245;1.21e-21;9!UBERON:0010009;1.21e-21;9!UBERON:0010011;1.21e-21;9!UBERON:0000454;1.21e-21;9!UBERON:0007023;7.07e-18;114!UBERON:0001894;3.70e-17;7!UBERON:0009663;5.22e-17;7!UBERON:0000200;3.26e-16;6!UBERON:0004733;4.71e-16;12!UBERON:0002028;4.71e-16;12!UBERON:0002298;2.03e-15;6!UBERON:0004732;1.14e-14;13!UBERON:0001872;1.11e-13;5!UBERON:0000349;1.37e-13;5!UBERON:0011216;2.77e-13;132!UBERON:0001871;4.01e-13;6!UBERON:0002021;5.22e-13;5!UBERON:0000369;4.64e-11;4!UBERON:0002435;4.64e-11;4!UBERON:0000204;4.64e-11;4!UBERON:0002784;2.90e-10;4!UBERON:0003296;3.66e-10;4!UBERON:0010133;3.66e-10;4!UBERON:0002680;4.09e-10;9!UBERON:0001895;4.09e-10;9!UBERON:0001870;4.18e-09;3!UBERON:0000988;5.96e-09;3!UBERON:0010314;6.44e-09;132!UBERON:0005383;1.46e-08;3!UBERON:0005382;1.46e-08;3!UBERON:0001896;3.65e-08;3!UBERON:0005290;3.65e-08;3!UBERON:0002240;1.10e-07;3!UBERON:0005174;1.10e-07;3!UBERON:0001137;1.10e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.21e-102,56;UBERON:0005068,1.21e-102,56;UBERON:0006241,1.21e-102,56;UBERON:0007135,1.21e-102,56;UBERON:0000073,5.09e-96,53;UBERON:0002616,5.09e-96,53;UBERON:0001017,2.56e-94,81;UBERON:0001016,9.30e-93,89;UBERON:0000955,1.05e-84,68;UBERON:0006238,1.05e-84,68;UBERON:0002780,8.93e-81,41;UBERON:0001890,8.93e-81,41;UBERON:0003080,8.93e-81,41;UBERON:0006240,8.93e-81,41;UBERON:0003075,1.62e-74,82;UBERON:0007284,1.62e-74,82;UBERON:0002346,2.08e-70,86;UBERON:0003528,7.94e-65,34;UBERON:0002020,7.94e-65,34;UBERON:0001893,1.19e-64,34;UBERON:0001869,9.72e-61,32;UBERON:0002791,5.43e-60,32;UBERON:0003056,1.13e-56,61;UBERON:0010371,8.45e-56,104;UBERON:0007023,7.61e-55,114;UBERON:0002619,4.18e-51,22;UBERON:0001950,2.97e-46,20;UBERON:0010314,7.16e-45,132;UBERON:0004121,1.29e-44,171;UBERON:0000924,1.29e-44,171;UBERON:0006601,1.29e-44,171;UBERON:0000956,2.02e-44,25;UBERON:0000203,2.02e-44,25;UBERON:0011216,1.42e-38,223;UBERON:0000025,2.01e-27,192;UBERON:0003076,6.04e-22,15;UBERON:0003057,6.04e-22,15;UBERON:0000125,1.06e-21,9;UBERON:0002308,1.06e-21,9;UBERON:0002420,1.29e-21,9;UBERON:0007245,1.29e-21,9;UBERON:0010009,1.29e-21,9;UBERON:0010011,1.29e-21,9;UBERON:0000454,1.29e-21,9;UBERON:0004111,4.96e-19,240;UBERON:0001894,3.94e-17,7;UBERON:0006222,3.94e-17,7;UBERON:0009663,5.56e-17,7;UBERON:0000200,3.30e-16,6;UBERON:0004733,4.50e-16,12;UBERON:0002028,4.50e-16,12;UBERON:0007277,4.50e-16,12;UBERON:0002298,2.06e-15,6;UBERON:0004732,1.10e-14,13;UBERON:0000483,5.39e-14,306;UBERON:0000119,1.02e-13,309;UBERON:0001872,1.19e-13,5;UBERON:0000349,1.32e-13,5;UBERON:0001871,4.14e-13,6;UBERON:0002021,5.43e-13,5;UBERON:0000369,4.41e-11,4;UBERON:0002435,4.41e-11,4;UBERON:0000204,4.41e-11,4;UBERON:0010082,4.41e-11,4;UBERON:0002784,3.09e-10,4;UBERON:0003296,3.84e-10,4;UBERON:0010133,3.84e-10,4;UBERON:0002680,3.90e-10,9;UBERON:0001895,3.90e-10,9;UBERON:0010092,3.90e-10,9;UBERON:0001870,4.24e-09,3;UBERON:0000988,5.96e-09,3;UBERON:0005383,1.43e-08,3;UBERON:0005382,1.43e-08,3;UBERON:0001896,3.70e-08,3;UBERON:0005290,3.70e-08,3;UBERON:0010096,3.70e-08,3;UBERON:0000923,8.00e-08,560;UBERON:0010316,8.00e-08,560;UBERON:0005291,8.00e-08,560;UBERON:0006598,8.00e-08,560;UBERON:0010317,8.00e-08,560;UBERON:0002532,8.00e-08,560;UBERON:0002240,8.66e-08,3;UBERON:0005174,8.66e-08,3;UBERON:0001137,8.66e-08,3;UBERON:0002050,1.20e-07,564;UBERON:0000922,1.80e-07,592;UBERON:0005423,6.41e-07,581 | |||
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|short_description=p3@RAB3C | |||
}} | }} |
Latest revision as of 06:32, 18 September 2015
Short description: | p3@RAB3C |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB3C_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_138453, uc003jrp.2_5end |
EntrezGene: | RAB3C |
HGNC: | 30269 |
UniProt: | Q96E17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data