FFCP PHASE1:Hg19::chr3:99980143..99980163,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:99980143..99980163,+ to FFCP PHASE1:Hg19::chr3:99980143..99980163,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55773 | |EntrezGene=55773 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25622 | |HGNC=25622 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=235bp_to_ENST00000486274_5end | |||
|cluster_id=chr3:99980143..99980163,+ | |||
|coexpression_cluster_id=C3976 | |||
|description=CAGE_peak_4_at_TBC1D23_5end | |||
|id=chr3:99980143..99980163,+ | |||
|ontology_enrichment_celltype=CL:0002322!8.60e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000039;7.57e-33;7!CL:0000586;7.57e-33;7!CL:0002322;3.35e-12;5!CL:0000764;2.40e-08;2!CL:0000558;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.23e-33,7;CL:0000586,8.23e-33,7;CL:0002322,3.75e-12,5;CL:0000764,2.15e-08,2;CL:0000765,2.15e-08,2;CL:0000050,2.15e-08,2;CL:0000038,2.15e-08,2;CL:0000558,2.15e-08,2;CL:0000547,2.15e-08,2;CL:0000549,2.15e-08,2;CL:0000550,2.15e-08,2;CL:0000552,2.15e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.96e-23;10!UBERON:0005564;3.96e-23;10 | |||
|ontology_enrichment_disease=DOID:305!5.94e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.93e-16;22!DOID:2994;2.93e-16;22!DOID:3371;6.44e-16;1!DOID:4549;6.44e-16;1!DOID:5861;6.44e-16;1!DOID:6496;6.44e-16;1!DOID:0050619;9.98e-16;1!DOID:1357;9.98e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.13e-16,22;DOID:2994,3.13e-16,22;DOID:3371,6.44e-16,1;DOID:4549,6.44e-16,1;DOID:5861,6.44e-16,1;DOID:6496,6.44e-16,1;DOID:0050619,9.99e-16,1;DOID:1357,9.99e-16,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.43e-29;8!UBERON:0003135;4.61e-21;11!UBERON:0001764;9.98e-16;1!UBERON:0001825;9.98e-16;1!UBERON:0000991;3.45e-11;21!UBERON:0003101;1.08e-10;22!UBERON:0000079;1.08e-10;22!UBERON:0000922;4.50e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.06e-29,8;UBERON:0003135,4.86e-21,11;UBERON:0001764,9.99e-16,1;UBERON:0001825,9.99e-16,1;UBERON:0000991,3.54e-11,21;UBERON:0009196,3.54e-11,21;UBERON:0009117,3.54e-11,21;UBERON:0005564,3.54e-11,21;UBERON:0004176,1.11e-10,22;UBERON:0003101,1.11e-10,22;UBERON:0000079,1.11e-10,22;UBERON:0003133,1.94e-07,48 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0.590129310341499,0.393010762749165,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0.323745888736263,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,1.09776335516636,1.06023814657188,0.929551542956147,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.567100388969546,1.07470227243418,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0.512556597022804,0,0,0,0,0,0.164254312027618,0,0.348631135379878,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,1.3071772551245,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0.178064071293475,0.165284915360978,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,2.78847488557207,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0.317873157960757,0,0,0.282706142867882,0.216388639742091,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.489961987071888,0.174118413160805,0,0,0,0,0,0,5.56013598156452,0,0,0,0,0,0,0.213452994739353,0.599428828746391,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0.321506296930038,0.550157746388935,1.66176135211674,0,0,0,0,0.236417121897595,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0.246277562248017,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,2.19875734750328,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0.906823702049089,0,0,0,0,0.219284049578707,0.176689145945881,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,1.07962490351128,0,0,0.577628330751691,0.762764190934334,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0.316027223465453,0,0,0,0,0,0,0,0.591660003652827,0.511280428554946,0,0,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0,0.795803100645473,0,0.11294608203896,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,2.07604586731021,0,1.01988829741982,6.94765253690457,1.56221329209236,3.0084904715085,0.227336094654718,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0.590129310341499,0.393010762749165,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0.709336764396714,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0.323745888736263,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,1.09776335516636,1.06023814657188,0.929551542956147,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0.352226082707465,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.567100388969546,1.07470227243418,0.290633938513962,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0.512556597022804,0,0,0,0,0,0.164254312027618,0,0.348631135379878,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.219259876645935,1.3071772551245,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0.178064071293475,0.165284915360978,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0.296964680832639,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,2.78847488557207,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0,0.317873157960757,0,0,0.282706142867882,0.216388639742091,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0.489961987071888,0.174118413160805,0,0,0,0,0,0,5.56013598156452,0,0,0,0,0,0,0.213452994739353,0.599428828746391,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0.321506296930038,0.550157746388935,1.66176135211674,0,0,0,0,0.236417121897595,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0.326587360109409,0,0.246277562248017,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,2.19875734750328,0,0,0,0,0,0,0.415045904808692,0,0,0,0,0,0,0,0.233713309847224,0,0,0.251567901752575,0,0.228840068396924,0.151230923763239,0,0.147855149989634,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0.906823702049089,0,0,0,0,0.219284049578707,0.176689145945881,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,1.07962490351128,0,0,0.577628330751691,0.762764190934334,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0.215927591218621,0,0,0.316027223465453,0,0,0,0,0,0,0,0.591660003652827,0.511280428554946,0,0,0.31020638566432,0,0.111855431797792,0,0,0,0,0,0,0,0.795803100645473,0,0.11294608203896,0.329821550236287,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,2.07604586731021,0,1.01988829741982,6.94765253690457,1.56221329209236,3.0084904715085,0.227336094654718,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p4@TBC1D23 | |||
}} | }} |
Latest revision as of 00:52, 20 September 2015
Short description: | p4@TBC1D23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TBC1D23_5end |
Coexpression cluster: | C3976_testicular_extraskeletal_cervical_maxillary_teratocarcinoma_iPS_H9 |
Association with transcript: | 235bp_to_ENST00000486274_5end |
EntrezGene: | TBC1D23 |
HGNC: | 25622 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.23e-33 | 7 |
germ cell | 8.23e-33 | 7 |
embryonic stem cell | 3.75e-12 | 5 |
erythroid lineage cell | 2.15e-08 | 2 |
erythroblast | 2.15e-08 | 2 |
megakaryocyte-erythroid progenitor cell | 2.15e-08 | 2 |
erythroid progenitor cell | 2.15e-08 | 2 |
reticulocyte | 2.15e-08 | 2 |
proerythroblast | 2.15e-08 | 2 |
basophilic erythroblast | 2.15e-08 | 2 |
polychromatophilic erythroblast | 2.15e-08 | 2 |
orthochromatic erythroblast | 2.15e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 9.06e-29 | 8 |
male reproductive organ | 4.86e-21 | 11 |
maxillary sinus | 9.99e-16 | 1 |
paranasal sinus | 9.99e-16 | 1 |
gonad | 3.54e-11 | 21 |
indifferent external genitalia | 3.54e-11 | 21 |
indifferent gonad | 3.54e-11 | 21 |
gonad primordium | 3.54e-11 | 21 |
external genitalia | 1.11e-10 | 22 |
male organism | 1.11e-10 | 22 |
male reproductive system | 1.11e-10 | 22 |
reproductive organ | 1.94e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.13e-16 | 22 |
germ cell cancer | 3.13e-16 | 22 |
chondrosarcoma | 6.44e-16 | 1 |
extraosseous chondrosarcoma | 6.44e-16 | 1 |
myxoid chondrosarcoma | 6.44e-16 | 1 |
extraskeletal myxoid chondrosarcoma | 6.44e-16 | 1 |
paranasal sinus cancer | 9.99e-16 | 1 |
maxillary sinus cancer | 9.99e-16 | 1 |