FFCP PHASE1:Hg19::chr3:35721106..35721127,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:35721106..35721127,+ to FFCP PHASE1:Hg19::chr3:35721106..35721127,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10777 | |EntrezGene=10777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16968 | |HGNC=16968 | ||
|TSSclassifier=strong | |||
|UniProt=A8K1F3,Q9UBL0 | |UniProt=A8K1F3,Q9UBL0 | ||
|association_with_transcript=0bp_to_ENST00000396482,ENST00000412048,ENST00000432682,ENST00000474696,NM_001025068,NM_001025069,uc003cgc.2,uc003cgd.2_5end | |||
|cluster_id=chr3:35721106..35721127,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_1_at_ARPP21_5end | |||
|id=chr3:35721106..35721127,+ | |||
|ontology_enrichment_celltype=CL:0000188!2.41e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0000188;5.04e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,5.36e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.46e-17;82!UBERON:0006215;9.57e-09;3!UBERON:0010122;5.17e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.48e-61!57;UBERON:0005068!1.48e-61!57;UBERON:0006241!1.48e-61!57;UBERON:0007135!1.48e-61!57;UBERON:0001017!2.12e-58!82;UBERON:0002616!2.33e-56!59;UBERON:0002780!3.46e-56!41;UBERON:0001890!3.46e-56!41;UBERON:0006240!3.46e-56!41;UBERON:0005743!7.27e-55!86;UBERON:0003080!1.46e-54!42;UBERON:0000955!2.83e-52!69;UBERON:0006238!2.83e-52!69;UBERON:0007023!1.45e-48!115;UBERON:0000073!5.47e-48!94;UBERON:0001016!5.47e-48!94;UBERON:0002346!3.14e-47!90;UBERON:0001893!1.90e-45!34;UBERON:0002020!8.47e-45!34;UBERON:0003528!8.47e-45!34;UBERON:0003075!1.91e-44!86;UBERON:0007284!1.91e-44!86;UBERON:0002791!8.17e-44!33;UBERON:0001869!9.45e-43!32;UBERON:0003056!2.64e-39!61;UBERON:0000153!6.56e-37!129;UBERON:0007811!6.56e-37!129;UBERON:0002619!1.49e-35!22;UBERON:0000033!6.85e-34!123;UBERON:0001950!1.97e-32!20;UBERON:0000924!2.23e-31!173;UBERON:0006601!2.23e-31!173;UBERON:0000956!1.47e-30!25;UBERON:0000203!1.47e-30!25;UBERON:0004121!4.13e-29!169;UBERON:0002420!5.94e-17!9;UBERON:0007245!5.94e-17!9;UBERON:0010009!5.94e-17!9;UBERON:0010011!5.94e-17!9;UBERON:0000454!5.94e-17!9;UBERON:0002308!9.67e-16!9;UBERON:0000125!9.67e-16!9;UBERON:0000483!3.74e-14!309;UBERON:0000475!4.17e-14!365;UBERON:0000119!8.10e-14!312;UBERON:0009663!1.76e-13!7;UBERON:0001894!6.03e-12!7;UBERON:0006222!6.03e-12!7;UBERON:0000200!1.06e-11!6;UBERON:0000025!1.61e-11!194;UBERON:0001871!2.24e-11!7;UBERON:0000481!1.38e-10!347;UBERON:0000349!5.37e-10!5;UBERON:0001872!7.54e-10!5;UBERON:0002021!2.13e-09!5;UBERON:0000477!2.40e-09!286;UBERON:0003076!2.89e-09!15;UBERON:0003057!2.89e-09!15;UBERON:0000369!6.92e-09!4;UBERON:0002435!6.92e-09!4;UBERON:0000204!6.92e-09!4;UBERON:0010082!6.92e-09!4;UBERON:0004111!1.21e-08!241;UBERON:0004733!5.89e-08!12;UBERON:0002028!5.89e-08!12;UBERON:0007277!5.89e-08!12;UBERON:0004732!3.21e-07!13;UBERON:0005383!4.39e-07!3;UBERON:0005382!4.39e-07!3;UBERON:0003296!6.99e-07!4;UBERON:0010133!6.99e-07!4;UBERON:0000064!9.60e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.59e-56;32!UBERON:0001893;5.06e-55;34!UBERON:0002780;3.98e-54;41!UBERON:0001890;3.98e-54;41!UBERON:0002791;5.78e-53;32!UBERON:0002619;4.02e-52;22!UBERON:0003528;3.19e-51;34!UBERON:0002020;3.19e-51;34!UBERON:0001950;1.73e-47;20!UBERON:0000073;2.05e-47;53!UBERON:0002616;2.05e-47;53!UBERON:0000956;2.46e-45;25!UBERON:0000203;2.46e-45;25!UBERON:0000955;9.40e-33;68!UBERON:0001017;8.59e-30;75!UBERON:0001016;2.45e-25;83!UBERON:0002420;6.48e-20;9!UBERON:0007245;6.48e-20;9!UBERON:0010009;6.48e-20;9!UBERON:0010011;6.48e-20;9!UBERON:0000454;6.48e-20;9!UBERON:0000200;1.69e-16;6!UBERON:0007023;5.92e-15;114!UBERON:0009663;7.55e-15;7!UBERON:0000125;1.01e-14;9!UBERON:0002308;1.01e-14;9!UBERON:0000349;5.09e-14;5!UBERON:0001871;7.64e-14;6!UBERON:0001872;8.97e-14;5!UBERON:0001134;1.48e-13;16!UBERON:0002036;1.48e-13;16!UBERON:0002021;3.36e-13;5!UBERON:0001894;6.22e-13;7!UBERON:0000369;2.29e-12;4!UBERON:0002435;2.29e-12;4!UBERON:0000204;2.29e-12;4!UBERON:0005383;1.02e-09;3!UBERON:0005382;1.02e-09;3!UBERON:0011216;1.81e-09;132!UBERON:0001870;3.36e-09;3!UBERON:0004733;3.52e-09;12!UBERON:0002028;3.52e-09;12!UBERON:0004732;2.15e-08;13!UBERON:0001873;5.17e-07;2!UBERON:0002680;7.33e-07;9!UBERON:0001895;7.33e-07;9!UBERON:0001876;7.85e-07;2!UBERON:0001875;8.41e-07;2!UBERON:0006514;8.41e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.55e-81,53;UBERON:0002616,1.55e-81,53;UBERON:0001049,3.82e-80,56;UBERON:0005068,3.82e-80,56;UBERON:0006241,3.82e-80,56;UBERON:0007135,3.82e-80,56;UBERON:0001017,6.18e-77,81;UBERON:0002780,2.19e-75,41;UBERON:0001890,2.19e-75,41;UBERON:0003080,2.19e-75,41;UBERON:0006240,2.19e-75,41;UBERON:0000955,1.00e-69,68;UBERON:0006238,1.00e-69,68;UBERON:0001016,5.45e-68,89;UBERON:0001893,1.82e-63,34;UBERON:0001869,1.96e-63,32;UBERON:0002791,6.66e-59,32;UBERON:0003528,7.21e-59,34;UBERON:0002020,7.21e-59,34;UBERON:0002346,8.30e-53,86;UBERON:0002619,4.40e-52,22;UBERON:0003075,4.68e-51,82;UBERON:0007284,4.68e-51,82;UBERON:0007023,4.07e-50,114;UBERON:0003056,1.46e-47,61;UBERON:0001950,1.87e-47,20;UBERON:0000956,2.67e-45,25;UBERON:0000203,2.67e-45,25;UBERON:0010371,1.27e-39,104;UBERON:0004121,1.95e-36,171;UBERON:0000924,1.95e-36,171;UBERON:0006601,1.95e-36,171;UBERON:0010314,1.28e-33,132;UBERON:0011216,8.41e-26,223;UBERON:0002420,6.57e-20,9;UBERON:0007245,6.57e-20,9;UBERON:0010009,6.57e-20,9;UBERON:0010011,6.57e-20,9;UBERON:0000454,6.57e-20,9;UBERON:0000025,6.88e-18,192;UBERON:0000200,1.63e-16,6;UBERON:0009663,7.47e-15,7;UBERON:0000125,9.91e-15,9;UBERON:0002308,9.91e-15,9;UBERON:0000483,3.68e-14,306;UBERON:0000349,5.30e-14,5;UBERON:0000119,6.94e-14,309;UBERON:0001871,7.23e-14,6;UBERON:0001872,8.75e-14,5;UBERON:0004111,1.49e-13,240;UBERON:0002021,4.03e-13,5;UBERON:0001894,6.42e-13,7;UBERON:0006222,6.42e-13,7;UBERON:0000369,2.29e-12,4;UBERON:0002435,2.29e-12,4;UBERON:0000204,2.29e-12,4;UBERON:0010082,2.29e-12,4;UBERON:0005383,1.02e-09,3;UBERON:0005382,1.02e-09,3;UBERON:0004733,3.27e-09,12;UBERON:0002028,3.27e-09,12;UBERON:0007277,3.27e-09,12;UBERON:0001870,3.32e-09,3;UBERON:0003076,3.65e-09,15;UBERON:0003057,3.65e-09,15;UBERON:0000923,5.01e-09,560;UBERON:0010316,5.01e-09,560;UBERON:0005291,5.01e-09,560;UBERON:0006598,5.01e-09,560;UBERON:0010317,5.01e-09,560;UBERON:0002532,5.01e-09,560;UBERON:0002050,7.68e-09,564;UBERON:0004732,2.01e-08,13;UBERON:0000922,3.42e-08,592;UBERON:0005423,4.42e-08,581;UBERON:0001873,5.18e-07,2;UBERON:0010122,5.18e-07,2;UBERON:0002680,7.33e-07,9;UBERON:0001895,7.33e-07,9;UBERON:0010092,7.33e-07,9;UBERON:0001876,8.07e-07,2;UBERON:0001875,8.30e-07,2;UBERON:0006514,8.30e-07,2 | |||
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| ||
|short_description=p1@ARPP21 | |||
}} | }} |
Latest revision as of 01:22, 18 September 2015
Short description: | p1@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARPP21_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | 0bp_to_ENST00000396482, ENST00000412048, ENST00000432682, ENST00000474696, NM_001025068, NM_001025069, uc003cgc.2, uc003cgd.2_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | A8K1F3Q9UBL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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cell of skeletal muscle | 5.36e-09 | 9 |