FFCP PHASE1:Hg19::chr3:115342338..115342343,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:115342338..115342343,+ to FFCP PHASE1:Hg19::chr3:115342338..115342343,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2596 | |EntrezGene=2596 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4140 | |HGNC=4140 | ||
|TSSclassifier=strong | |||
|UniProt=A8K0Y4 | |UniProt=A8K0Y4 | ||
|association_with_transcript=-13bp_to_ENST00000393780_5end | |||
|cluster_id=chr3:115342338..115342343,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_6_at_GAP43_5end | |||
|id=chr3:115342338..115342343,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.30e-09;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.12e-15;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.55e-97!57;UBERON:0005068!5.55e-97!57;UBERON:0006241!5.55e-97!57;UBERON:0007135!5.55e-97!57;UBERON:0001017!7.38e-92!82;UBERON:0005743!4.03e-90!86;UBERON:0000073!3.37e-86!94;UBERON:0001016!3.37e-86!94;UBERON:0002780!1.52e-81!41;UBERON:0001890!1.52e-81!41;UBERON:0006240!1.52e-81!41;UBERON:0002616!1.93e-81!59;UBERON:0003080!2.21e-79!42;UBERON:0000955!3.74e-77!69;UBERON:0006238!3.74e-77!69;UBERON:0002020!9.01e-75!34;UBERON:0003528!9.01e-75!34;UBERON:0003075!3.74e-74!86;UBERON:0007284!3.74e-74!86;UBERON:0001893!4.75e-74!34;UBERON:0002791!1.11e-71!33;UBERON:0002346!3.03e-70!90;UBERON:0001869!5.41e-70!32;UBERON:0003056!2.47e-57!61;UBERON:0000956!1.55e-53!25;UBERON:0000203!1.55e-53!25;UBERON:0002619!5.19e-52!22;UBERON:0001950!2.53e-47!20;UBERON:0007023!5.52e-46!115;UBERON:0004121!5.01e-45!169;UBERON:0000924!1.23e-43!173;UBERON:0006601!1.23e-43!173;UBERON:0000033!1.29e-43!123;UBERON:0000153!1.03e-42!129;UBERON:0007811!1.03e-42!129;UBERON:0000025!2.48e-26!194;UBERON:0002420!3.25e-22!9;UBERON:0007245!3.25e-22!9;UBERON:0010009!3.25e-22!9;UBERON:0010011!3.25e-22!9;UBERON:0000454!3.25e-22!9;UBERON:0002308!3.42e-22!9;UBERON:0000125!3.42e-22!9;UBERON:0001871!1.09e-21!7;UBERON:0004111!1.91e-18!241;UBERON:0003076!2.77e-18!15;UBERON:0003057!2.77e-18!15;UBERON:0009663!2.46e-17!7;UBERON:0000200!9.91e-17!6;UBERON:0000477!1.25e-16!286;UBERON:0000119!1.56e-15!312;UBERON:0000064!3.06e-15!219;UBERON:0000483!4.61e-15!309;UBERON:0002298!9.40e-15!8;UBERON:0000349!1.66e-13!5;UBERON:0002021!9.81e-13!5;UBERON:0004733!2.10e-12!12;UBERON:0002028!2.10e-12!12;UBERON:0007277!2.10e-12!12;UBERON:0004732!2.46e-11!13;UBERON:0000369!2.61e-11!4;UBERON:0002435!2.61e-11!4;UBERON:0000204!2.61e-11!4;UBERON:0010082!2.61e-11!4;UBERON:0000475!2.89e-11!365;UBERON:0002771!1.52e-09!3;UBERON:0001894!2.44e-09!7;UBERON:0006222!2.44e-09!7;UBERON:0001872!5.27e-09!5;UBERON:0005383!5.67e-09!3;UBERON:0005382!5.67e-09!3;UBERON:0000988!1.03e-08!3;UBERON:0006331!1.56e-08!3;UBERON:0002240!3.33e-08!3;UBERON:0000062!3.87e-08!511;UBERON:0000922!4.48e-08!612;UBERON:0000481!4.87e-08!347;UBERON:0005174!4.95e-08!5;UBERON:0001137!4.95e-08!5;UBERON:0001896!5.09e-08!3;UBERON:0005290!5.09e-08!3;UBERON:0010096!5.09e-08!3;UBERON:0000923!2.45e-07!604;UBERON:0005291!2.45e-07!604;UBERON:0006598!2.45e-07!604;UBERON:0002532!2.45e-07!604;UBERON:0002050!2.69e-07!605;UBERON:0005423!2.69e-07!605;UBERON:0002680!4.71e-07!9;UBERON:0001895!4.71e-07!9;UBERON:0010092!4.71e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.66e-74;22!UBERON:0001869;2.09e-71;32!UBERON:0003528;1.71e-69;34!UBERON:0002020;1.71e-69;34!UBERON:0002791;9.93e-68;32!UBERON:0001950;1.55e-66;20!UBERON:0000956;2.36e-65;25!UBERON:0000203;2.36e-65;25!UBERON:0001893;4.80e-65;34!UBERON:0002780;2.32e-60;41!UBERON:0001890;2.32e-60;41!UBERON:0000073;1.21e-44;53!UBERON:0002616;1.21e-44;53!UBERON:0000955;3.25e-40;68!UBERON:0001017;1.69e-37;75!UBERON:0001871;9.99e-32;6!UBERON:0001016;2.13e-30;83!UBERON:0000200;9.71e-28;6!UBERON:0000349;9.22e-22;5!UBERON:0002420;1.29e-17;9!UBERON:0000125;1.29e-17;9!UBERON:0007245;1.29e-17;9!UBERON:0002308;1.29e-17;9!UBERON:0010009;1.29e-17;9!UBERON:0010011;1.29e-17;9!UBERON:0000454;1.29e-17;9!UBERON:0001870;4.00e-15;3!UBERON:0001872;1.47e-14;5!UBERON:0000988;6.81e-14;3!UBERON:0011216;2.86e-13;132!UBERON:0007023;1.77e-11;114!UBERON:0000369;4.70e-11;4!UBERON:0002435;4.70e-11;4!UBERON:0000204;4.70e-11;4!UBERON:0002702;7.51e-11;2!UBERON:0002771;8.46e-11;2!UBERON:0002784;1.13e-10;4!UBERON:0009663;1.26e-10;7!UBERON:0001894;1.58e-10;7!UBERON:0001905;4.03e-10;2!UBERON:0002757;4.03e-10;2!UBERON:0010134;4.03e-10;2!UBERON:0005408;4.03e-10;2!UBERON:0001899;4.03e-10;2!UBERON:0001876;6.06e-10;2!UBERON:0002148;6.06e-10;2!UBERON:0006331;6.06e-10;2!UBERON:0009662;6.06e-10;2!UBERON:0001954;1.30e-09;2!UBERON:0003022;1.30e-09;2!UBERON:0002421;1.30e-09;2!UBERON:0002600;1.30e-09;2!UBERON:0002021;1.59e-08;5!UBERON:0002680;5.47e-08;9!UBERON:0001895;5.47e-08;9!UBERON:0010314;5.48e-08;132!UBERON:0005383;2.33e-07;3!UBERON:0005382;2.33e-07;3!UBERON:0002298;3.56e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.74e-89,56;UBERON:0005068,2.74e-89,56;UBERON:0006241,2.74e-89,56;UBERON:0007135,2.74e-89,56;UBERON:0001017,1.19e-87,81;UBERON:0002780,3.54e-84,41;UBERON:0001890,3.54e-84,41;UBERON:0003080,3.54e-84,41;UBERON:0006240,3.54e-84,41;UBERON:0000073,7.66e-84,53;UBERON:0002616,7.66e-84,53;UBERON:0003528,6.13e-82,34;UBERON:0002020,6.13e-82,34;UBERON:0001869,3.44e-80,32;UBERON:0001016,2.74e-78,89;UBERON:0000955,4.97e-76,68;UBERON:0006238,4.97e-76,68;UBERON:0001893,2.87e-75,34;UBERON:0002619,1.60e-74,22;UBERON:0002791,7.69e-74,32;UBERON:0001950,1.74e-66,20;UBERON:0000956,2.28e-65,25;UBERON:0000203,2.28e-65,25;UBERON:0003075,5.86e-59,82;UBERON:0007284,5.86e-59,82;UBERON:0002346,6.71e-56,86;UBERON:0003056,7.31e-55,61;UBERON:0010371,5.13e-45,104;UBERON:0007023,2.32e-38,114;UBERON:0004121,1.50e-37,171;UBERON:0000924,1.50e-37,171;UBERON:0006601,1.50e-37,171;UBERON:0010314,2.38e-36,132;UBERON:0011216,3.75e-32,223;UBERON:0001871,6.67e-32,6;UBERON:0000200,8.33e-28,6;UBERON:0000025,1.42e-22,192;UBERON:0000349,3.26e-22,5;UBERON:0002420,8.59e-18,9;UBERON:0007245,8.59e-18,9;UBERON:0010009,8.59e-18,9;UBERON:0010011,8.59e-18,9;UBERON:0000454,8.59e-18,9;UBERON:0000125,9.11e-18,9;UBERON:0002308,9.11e-18,9;UBERON:0004111,1.58e-16,240;UBERON:0001870,5.19e-15,3;UBERON:0001872,1.04e-14,5;UBERON:0000988,6.39e-14,3;UBERON:0000483,2.67e-11,306;UBERON:0000369,3.65e-11,4;UBERON:0002435,3.65e-11,4;UBERON:0000204,3.65e-11,4;UBERON:0010082,3.65e-11,4;UBERON:0000119,4.08e-11,309;UBERON:0002771,7.90e-11,2;UBERON:0002702,7.90e-11,2;UBERON:0002784,1.15e-10,4;UBERON:0009663,1.26e-10,7;UBERON:0001894,1.84e-10,7;UBERON:0006222,1.84e-10,7;UBERON:0001876,3.21e-10,2;UBERON:0002148,3.52e-10,2;UBERON:0006331,3.52e-10,2;UBERON:0009662,3.52e-10,2;UBERON:0001905,5.07e-10,2;UBERON:0002757,5.07e-10,2;UBERON:0010134,5.07e-10,2;UBERON:0005408,5.07e-10,2;UBERON:0001899,5.07e-10,2;UBERON:0003076,6.25e-10,15;UBERON:0003057,6.25e-10,15;UBERON:0001954,1.09e-09,2;UBERON:0003022,1.09e-09,2;UBERON:0002421,1.09e-09,2;UBERON:0002600,1.09e-09,2;UBERON:0002021,2.32e-08,5;UBERON:0002680,5.48e-08,9;UBERON:0001895,5.48e-08,9;UBERON:0010092,5.48e-08,9;UBERON:0000923,9.55e-08,560;UBERON:0010316,9.55e-08,560;UBERON:0005291,9.55e-08,560;UBERON:0006598,9.55e-08,560;UBERON:0010317,9.55e-08,560;UBERON:0002532,9.55e-08,560;UBERON:0002050,1.25e-07,564;UBERON:0005383,2.19e-07,3;UBERON:0005382,2.19e-07,3;UBERON:0002298,3.45e-07,6;UBERON:0005423,3.80e-07,581;UBERON:0000922,7.56e-07,592 | |||
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| ||
|short_description=p6@GAP43 | |||
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Latest revision as of 17:50, 19 September 2015
Short description: | p6@GAP43 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GAP43_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -13bp_to_ENST00000393780_5end |
EntrezGene: | GAP43 |
HGNC: | 4140 |
UniProt: | A8K0Y4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data