FFCP PHASE1:Hg19::chr2:21228672..21228686,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=338 | |EntrezGene=338 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=603 | |HGNC=603 | ||
|TSSclassifier=strong | |||
|UniProt=P04114 | |UniProt=P04114 | ||
|association_with_transcript=-115bp_to_M12413_5end | |||
|cluster_id=chr2:21228672..21228686,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_28_at_APOB_5end | |||
|id=chr2:21228672..21228686,- | |||
|ontology_enrichment_celltype=CL:0000181!3.46e-37!12;CL:0000417!3.46e-37!12;CL:0000668!3.46e-37!12;CL:0000414!3.46e-37!12;CL:0000412!3.46e-37!12;CL:0000182!3.46e-37!12;CL:0000223!2.35e-11!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.13e-57;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.73e-57,12;CL:0000223,1.39e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.65e-46;11!UBERON:0009497;6.72e-39;13!UBERON:0001041;8.75e-17;30!UBERON:0003104;2.72e-16;31!CL:0000223;5.58e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.28e-38!19;UBERON:0006925!2.28e-38!19;UBERON:0008836!2.28e-38!19;UBERON:0005057!5.29e-34!26;UBERON:0008835!5.57e-33!22;UBERON:0003894!5.57e-33!22;UBERON:0009854!1.70e-31!23;UBERON:0007499!6.98e-29!25;UBERON:0009497!6.98e-29!25;UBERON:0000015!6.98e-29!25;UBERON:0002423!6.98e-29!25;UBERON:0006235!6.98e-29!25;UBERON:0004161!6.98e-29!25;UBERON:0009856!1.00e-27!26;UBERON:0002365!4.63e-23!31;UBERON:0002330!4.63e-23!31;UBERON:0002368!2.76e-20!35;UBERON:0003929!6.50e-19!54;UBERON:0000949!1.68e-15!45;UBERON:0004921!2.48e-15!129;UBERON:0004185!2.48e-15!129;UBERON:0005172!2.64e-15!55;UBERON:0005173!2.64e-15!55;UBERON:0002530!3.48e-14!59;UBERON:0002417!1.19e-13!61;UBERON:0000916!1.19e-13!61;UBERON:0001007!2.48e-12!155;UBERON:0001555!2.48e-12!155;UBERON:0007026!2.48e-12!155;UBERON:0005911!7.28e-12!82;UBERON:0004119!4.29e-11!169;UBERON:0000925!4.29e-11!169;UBERON:0006595!4.29e-11!169;UBERON:0002084!2.74e-10!1;UBERON:0002082!2.74e-10!1;UBERON:0004706!2.74e-10!1;UBERON:0005409!1.68e-08!35;UBERON:0001041!6.37e-08!98;UBERON:0000160!6.81e-08!27;UBERON:0005177!3.97e-07!107;UBERON:0000077!7.98e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.01e-59;19!UBERON:0006925;1.01e-59;19!UBERON:0002423;3.03e-45;25!UBERON:0002365;3.11e-35;31!UBERON:0002330;3.11e-35;31!UBERON:0002368;6.29e-31;33!UBERON:0002108;1.20e-25;4!UBERON:0000949;4.08e-22;43!UBERON:0005172;1.63e-13;52!UBERON:0005173;1.63e-13;52!UBERON:0002417;1.59e-12;58!UBERON:0000916;1.59e-12;58!UBERON:0001007;2.18e-11;81!UBERON:0002530;5.05e-11;57!UBERON:0000160;1.43e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,8.83e-60,19;UBERON:0006925,8.83e-60,19;UBERON:0008836,8.83e-60,19;UBERON:0008835,1.51e-51,22;UBERON:0003894,1.51e-51,22;UBERON:0009854,2.79e-49,23;UBERON:0007499,2.74e-45,25;UBERON:0009497,2.74e-45,25;UBERON:0000015,2.74e-45,25;UBERON:0002423,2.74e-45,25;UBERON:0006235,2.74e-45,25;UBERON:0004161,2.74e-45,25;UBERON:0009856,1.60e-43,26;UBERON:0002365,2.13e-36,31;UBERON:0002330,2.13e-36,31;UBERON:0002368,3.69e-32,35;UBERON:0002108,1.30e-25,4;UBERON:0000949,7.50e-25,45;UBERON:0003929,1.40e-20,54;UBERON:0005172,1.40e-20,54;UBERON:0005173,1.40e-20,54;UBERON:0002530,9.08e-19,59;UBERON:0002417,1.92e-18,60;UBERON:0000916,1.92e-18,60;UBERON:0004921,5.78e-16,118;UBERON:0005911,2.89e-13,82;UBERON:0001007,8.82e-13,145;UBERON:0001555,8.82e-13,145;UBERON:0007026,8.82e-13,145;UBERON:0001041,1.88e-12,87;UBERON:0004119,1.81e-11,160;UBERON:0000925,1.81e-11,160;UBERON:0006595,1.81e-11,160;UBERON:0005177,1.34e-10,101;UBERON:0009569,1.81e-09,112;UBERON:0003914,5.06e-09,117;UBERON:0005256,1.30e-08,122;UBERON:0011216,9.75e-08,223;UBERON:0000160,1.46e-07,17;UBERON:0000490,6.29e-07,148 | |||
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|short_description=p28@APOB | |||
}} | }} |
Latest revision as of 22:57, 19 September 2015
Short description: | p28@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -115bp_to_M12413_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.73e-57 | 12 |
endodermal cell | 1.39e-11 | 58 |