FFCP PHASE1:Hg19::chr22:33454354..33454374,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:33454354..33454374,- to FFCP PHASE1:Hg19::chr22:33454354..33454374,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8224 | |EntrezGene=8224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11496 | |HGNC=11496 | ||
|TSSclassifier=strong | |||
|UniProt=O14994 | |UniProt=O14994 | ||
|association_with_transcript=0bp_to_ENST00000358763_5end | |||
|cluster_id=chr22:33454354..33454374,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SYN3_5end | |||
|id=chr22:33454354..33454374,- | |||
|ontology_enrichment_celltype=CL:0000236!2.94e-09!14;CL:0002322!1.67e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000236;4.40e-12;13!CL:0002322;4.29e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.19e-11,14;CL:0002322,3.89e-10,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.85e-14;82!UBERON:0006215;7.92e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.29e-55!57;UBERON:0005068!1.29e-55!57;UBERON:0006241!1.29e-55!57;UBERON:0007135!1.29e-55!57;UBERON:0001017!3.39e-52!82;UBERON:0005743!1.41e-50!86;UBERON:0000073!6.46e-47!94;UBERON:0001016!6.46e-47!94;UBERON:0002780!1.46e-46!41;UBERON:0001890!1.46e-46!41;UBERON:0006240!1.46e-46!41;UBERON:0002616!2.05e-46!59;UBERON:0000955!3.07e-46!69;UBERON:0006238!3.07e-46!69;UBERON:0003080!4.02e-45!42;UBERON:0007023!4.92e-44!115;UBERON:0003075!2.66e-41!86;UBERON:0007284!2.66e-41!86;UBERON:0002346!6.41e-40!90;UBERON:0002020!3.13e-38!34;UBERON:0003528!3.13e-38!34;UBERON:0001893!4.42e-38!34;UBERON:0002791!9.54e-37!33;UBERON:0001869!2.62e-36!32;UBERON:0003056!7.00e-33!61;UBERON:0002619!2.72e-32!22;UBERON:0001950!7.28e-30!20;UBERON:0000956!1.57e-27!25;UBERON:0000203!1.57e-27!25;UBERON:0004121!2.57e-24!169;UBERON:0000924!5.07e-24!173;UBERON:0006601!5.07e-24!173;UBERON:0000033!6.77e-24!123;UBERON:0000153!9.02e-23!129;UBERON:0007811!9.02e-23!129;UBERON:0002420!2.03e-12!9;UBERON:0007245!2.03e-12!9;UBERON:0010009!2.03e-12!9;UBERON:0010011!2.03e-12!9;UBERON:0000454!2.03e-12!9;UBERON:0001871!3.69e-12!7;UBERON:0002308!4.62e-12!9;UBERON:0000125!4.62e-12!9;UBERON:0003076!1.58e-11!15;UBERON:0003057!1.58e-11!15;UBERON:0000025!5.02e-11!194;UBERON:0000200!8.53e-10!6;UBERON:0001894!9.45e-10!7;UBERON:0006222!9.45e-10!7;UBERON:0009663!1.05e-09!7;UBERON:0004733!1.31e-08!12;UBERON:0002028!1.31e-08!12;UBERON:0007277!1.31e-08!12;UBERON:0002021!1.76e-08!5;UBERON:0001872!1.95e-08!5;UBERON:0002298!4.30e-08!8;UBERON:0000349!4.70e-08!5;UBERON:0004732!9.08e-08!13;UBERON:0004111!6.07e-07!241;UBERON:0000369!8.69e-07!4;UBERON:0002435!8.69e-07!4;UBERON:0000204!8.69e-07!4;UBERON:0010082!8.69e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.48e-47;32!UBERON:0002619;5.98e-46;22!UBERON:0003528;4.33e-45;34!UBERON:0002020;4.33e-45;34!UBERON:0001893;8.18e-45;34!UBERON:0002791;4.22e-44;32!UBERON:0002780;6.82e-44;41!UBERON:0001890;6.82e-44;41!UBERON:0001950;1.92e-42;20!UBERON:0000956;9.43e-40;25!UBERON:0000203;9.43e-40;25!UBERON:0000073;3.09e-39;53!UBERON:0002616;3.09e-39;53!UBERON:0000955;6.17e-29;68!UBERON:0001017;2.50e-27;75!UBERON:0001016;1.53e-22;83!UBERON:0001871;7.93e-15;6!UBERON:0002420;3.19e-14;9!UBERON:0007245;3.19e-14;9!UBERON:0010009;3.19e-14;9!UBERON:0010011;3.19e-14;9!UBERON:0000454;3.19e-14;9!UBERON:0000125;9.30e-14;9!UBERON:0002308;9.30e-14;9!UBERON:0000200;1.97e-13;6!UBERON:0004733;2.78e-12;12!UBERON:0002028;2.78e-12;12!UBERON:0002298;6.88e-12;6!UBERON:0002021;1.57e-11;5!UBERON:0001872;1.76e-11;5!UBERON:0004732;3.48e-11;13!UBERON:0000349;6.24e-11;5!UBERON:0001894;2.03e-10;7!UBERON:0009663;2.10e-10;7!UBERON:0007023;4.43e-10;114!UBERON:0000369;3.88e-09;4!UBERON:0002435;3.88e-09;4!UBERON:0002784;3.88e-09;4!UBERON:0000204;3.88e-09;4!UBERON:0011216;6.38e-09;132!UBERON:0002680;7.70e-08;9!UBERON:0001895;7.70e-08;9!UBERON:0001870;1.82e-07;3!UBERON:0005383;3.04e-07;3!UBERON:0005382;3.04e-07;3!UBERON:0000988;4.98e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.55e-77,56;UBERON:0005068,3.55e-77,56;UBERON:0006241,3.55e-77,56;UBERON:0007135,3.55e-77,56;UBERON:0000073,2.08e-72,53;UBERON:0002616,2.08e-72,53;UBERON:0001017,2.13e-68,81;UBERON:0000955,1.55e-63,68;UBERON:0006238,1.55e-63,68;UBERON:0001016,3.12e-62,89;UBERON:0002780,2.85e-61,41;UBERON:0001890,2.85e-61,41;UBERON:0003080,2.85e-61,41;UBERON:0006240,2.85e-61,41;UBERON:0001869,1.66e-52,32;UBERON:0003075,2.36e-52,82;UBERON:0007284,2.36e-52,82;UBERON:0003528,2.92e-52,34;UBERON:0002020,2.92e-52,34;UBERON:0001893,4.77e-52,34;UBERON:0002346,3.25e-49,86;UBERON:0002791,9.62e-49,32;UBERON:0002619,5.76e-46,22;UBERON:0001950,1.88e-42,20;UBERON:0003056,7.35e-42,61;UBERON:0010371,1.84e-41,104;UBERON:0000956,9.12e-40,25;UBERON:0000203,9.12e-40,25;UBERON:0007023,2.31e-33,114;UBERON:0010314,1.37e-29,132;UBERON:0004121,4.57e-28,171;UBERON:0000924,4.57e-28,171;UBERON:0006601,4.57e-28,171;UBERON:0011216,5.08e-25,223;UBERON:0000025,5.43e-19,192;UBERON:0003076,1.70e-16,15;UBERON:0003057,1.70e-16,15;UBERON:0001871,8.02e-15,6;UBERON:0002420,3.71e-14,9;UBERON:0007245,3.71e-14,9;UBERON:0010009,3.71e-14,9;UBERON:0010011,3.71e-14,9;UBERON:0000454,3.71e-14,9;UBERON:0000125,1.08e-13,9;UBERON:0002308,1.08e-13,9;UBERON:0000200,1.97e-13,6;UBERON:0004733,2.93e-12,12;UBERON:0002028,2.93e-12,12;UBERON:0007277,2.93e-12,12;UBERON:0004111,3.51e-12,240;UBERON:0002298,7.23e-12,6;UBERON:0002021,1.54e-11,5;UBERON:0001872,1.78e-11,5;UBERON:0004732,3.65e-11,13;UBERON:0000349,6.31e-11,5;UBERON:0001894,2.19e-10,7;UBERON:0006222,2.19e-10,7;UBERON:0009663,2.42e-10,7;UBERON:0002784,3.92e-09,4;UBERON:0000369,4.17e-09,4;UBERON:0002435,4.17e-09,4;UBERON:0000204,4.17e-09,4;UBERON:0010082,4.17e-09,4;UBERON:0000483,1.85e-08,306;UBERON:0000119,3.06e-08,309;UBERON:0002680,7.80e-08,9;UBERON:0001895,7.80e-08,9;UBERON:0010092,7.80e-08,9;UBERON:0001870,1.77e-07,3;UBERON:0005383,3.17e-07,3;UBERON:0005382,3.17e-07,3;UBERON:0000988,4.98e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,4.36910889009705,1.77901850772711,2.13365111283254,0.400395987036012,2.29900975981793,3.96626923670917,2.86216126360609,9.10740750575117,5.28513470433845,5.3518251937532,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7336861394044,12.9879172955056,9.06312754382243,5.49403591581463,9.33587148239825,36.1327585485072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0.540031437238115,0.79312517629427,0,4.81239927631679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,23.8595435463912,40.2314530934066,0,0,1.90012867315194,0,1.38141957765574,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,21.3253204140948,22.6354159514917,39.9227596002388,0,0,0,0,0,0,25.1662662466269,0,0,29.2294657318567,14.3509761964235,10.6807215421958,8.0722859749794,15.664023804538,15.795748595086,0,0.139423744278603,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,1.7524294574976,0,6.79366892603483,0,0,0,0,1.20990716048664,26.9344030234831,0.63186579628488,2.85614496887536,0.72581733978073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,1.059073520298,0.677942222341597,0,0,24.8811428106603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2071449080664,3.01191833562385,1.27746588066972,0,0,0,0,0,0,0,0,0,0,1.16495949527454,4.09672547997563,3.13180261848433,3.77459845583435,0,0,7.95229689809303,16.4806121395006,11.0919672440863,8.9400633788202,7.47792608452533,0,0,29.2812863091679,0,0.236417121897595,0.209818352539992,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,2.37955392192264,0,0,13.3161445052397,7.53725829933333,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,24.8099090390756,29.5303561062751,33.801551290755,5.16068276121064,5.32459447376891,10.4942920970938,0.415045904808692,0,0,1.99825733481477,0,2.81000943484129,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,3.65977677773876,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,37.0532608886638,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55788742607303,0,0,0.218419276384028,0,0,0.123935764259002,0,0,0,0,0,0,24.599793211944,26.9223495018611,30.0111655027444,23.3832655234461,49.9101958519002,25.7264979166891,18.7311748932947,0,0,0,0,0,0,2.7614397042404,0,0.0752103283492573,0.20170506870352,0,0,0,0,24.7862935549508,20.30803056396,40.5106121142321,26.6980560916348,33.9124381591296,0,0,0,0,42.3204450343847,43.3806001662283,0.606965604236632,5.00856820972855,0,0,0,27.051953724779,25.1909722745712,0,0,0,18.5396396100882,0,0.913158720509496,0,0,1.50100742770978,3.63431306985271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,1.30812099855325,0,1.31928620094515,5.43466236840025,0,0,0,0,0,5.10402014498858,1.18818560130834,5.9171801861676,0,0.187967835959707,0.128915775947154,0,0,0,0,1.46067277649303,0.458729283404541,0.573358332605805,0,29.7802727036206,39.7079128209743,0.5290268405154,0,0,0,4.16349201955761,26.7700651311054,0,5.30341914658305,11.4903484264191,0.0918948995348449,4.76344324655513,0.151557396436479,0.803892390468535,8.29169439458779,6.20597975171371,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0,0.740872583160463,0.143444410785353,0,0,0,0,0,0,0,0,0,2.01273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,4.36910889009705,1.77901850772711,2.13365111283254,0.400395987036012,2.29900975981793,3.96626923670917,2.86216126360609,9.10740750575117,5.28513470433845,5.3518251937532,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.7336861394044,12.9879172955056,9.06312754382243,5.49403591581463,9.33587148239825,36.1327585485072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0.569647187174163,0.476463550915578,0.411362273086194,0,0.540031437238115,0.79312517629427,0,4.81239927631679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,23.8595435463912,40.2314530934066,0,0,1.90012867315194,0,1.38141957765574,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,21.3253204140948,22.6354159514917,39.9227596002388,0,0,0,0,0,0,25.1662662466269,0,0,29.2294657318567,14.3509761964235,10.6807215421958,8.0722859749794,15.664023804538,15.795748595086,0,0.139423744278603,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,1.7524294574976,0,6.79366892603483,0,0,0,0,1.20990716048664,26.9344030234831,0.63186579628488,2.85614496887536,0.72581733978073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,1.059073520298,0.677942222341597,0,0,24.8811428106603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2071449080664,3.01191833562385,1.27746588066972,0,0,0,0,0,0,0,0,0,0,1.16495949527454,4.09672547997563,3.13180261848433,3.77459845583435,0,0,7.95229689809303,16.4806121395006,11.0919672440863,8.9400633788202,7.47792608452533,0,0,29.2812863091679,0,0.236417121897595,0.209818352539992,0,0,0,0,0,0,0,0,0.326587360109409,0,0.082092520749339,0,2.37955392192264,0,0,13.3161445052397,7.53725829933333,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,24.8099090390756,29.5303561062751,33.801551290755,5.16068276121064,5.32459447376891,10.4942920970938,0.415045904808692,0,0,1.99825733481477,0,2.81000943484129,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,3.65977677773876,0,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,37.0532608886638,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55788742607303,0,0,0.218419276384028,0,0,0.123935764259002,0,0,0,0,0,0,24.599793211944,26.9223495018611,30.0111655027444,23.3832655234461,49.9101958519002,25.7264979166891,18.7311748932947,0,0,0,0,0,0,2.7614397042404,0,0.0752103283492573,0.20170506870352,0,0,0,0,24.7862935549508,20.30803056396,40.5106121142321,26.6980560916348,33.9124381591296,0,0,0,0,42.3204450343847,43.3806001662283,0.606965604236632,5.00856820972855,0,0,0,27.051953724779,25.1909722745712,0,0,0,18.5396396100882,0,0.913158720509496,0,0,1.50100742770978,3.63431306985271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,1.30812099855325,0,1.31928620094515,5.43466236840025,0,0,0,0,0,5.10402014498858,1.18818560130834,5.9171801861676,0,0.187967835959707,0.128915775947154,0,0,0,0,1.46067277649303,0.458729283404541,0.573358332605805,0,29.7802727036206,39.7079128209743,0.5290268405154,0,0,0,4.16349201955761,26.7700651311054,0,5.30341914658305,11.4903484264191,0.0918948995348449,4.76344324655513,0.151557396436479,0.803892390468535,8.29169439458779,6.20597975171371,0,0,0,0.124149428591716,0.112131862580613,0,0,0,0,0.740872583160463,0.143444410785353,0,0,0,0,0,0,0,0,0,2.01273793591026,0 | ||
|short_description=p1@SYN3 | |||
}} | }} |
Latest revision as of 23:05, 19 September 2015
Short description: | p1@SYN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SYN3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000358763_5end |
EntrezGene: | SYN3 |
HGNC: | 11496 |
UniProt: | O14994 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.19e-11 | 14 |
embryonic stem cell | 3.89e-10 | 5 |