FFCP PHASE1:Hg19::chr20:5903185..5903220,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:5903185..5903220,+ to FFCP PHASE1:Hg19::chr20:5903185..5903220,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:5903185..5903220,+ | |||
|coexpression_cluster_id=C377 | |||
|description=CAGE_peak_at_chr20:5903185..5903220,+ | |||
|id=chr20:5903185..5903220,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.33e-16;3!UBERON:0006601;6.70e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.66e-70!57;UBERON:0005068!2.66e-70!57;UBERON:0006241!2.66e-70!57;UBERON:0007135!2.66e-70!57;UBERON:0002616!1.35e-61!59;UBERON:0002780!8.50e-58!41;UBERON:0001890!8.50e-58!41;UBERON:0006240!8.50e-58!41;UBERON:0001017!1.36e-57!82;UBERON:0000955!1.57e-57!69;UBERON:0006238!1.57e-57!69;UBERON:0007023!5.74e-57!115;UBERON:0005743!2.91e-56!86;UBERON:0003080!3.62e-56!42;UBERON:0000073!7.22e-54!94;UBERON:0001016!7.22e-54!94;UBERON:0003075!4.97e-50!86;UBERON:0007284!4.97e-50!86;UBERON:0002020!8.51e-49!34;UBERON:0003528!8.51e-49!34;UBERON:0001869!1.70e-48!32;UBERON:0001893!4.12e-48!34;UBERON:0002346!4.06e-47!90;UBERON:0002791!1.60e-46!33;UBERON:0002619!7.25e-43!22;UBERON:0003056!2.14e-39!61;UBERON:0001950!5.25e-39!20;UBERON:0000956!4.80e-37!25;UBERON:0000203!4.80e-37!25;UBERON:0000033!1.40e-34!123;UBERON:0000153!3.05e-32!129;UBERON:0007811!3.05e-32!129;UBERON:0004121!1.95e-28!169;UBERON:0000924!2.19e-27!173;UBERON:0006601!2.19e-27!173;UBERON:0000025!4.28e-17!194;UBERON:0001871!2.14e-16!7;UBERON:0004111!1.20e-15!241;UBERON:0003076!7.91e-15!15;UBERON:0003057!7.91e-15!15;UBERON:0002420!3.20e-13!9;UBERON:0007245!3.20e-13!9;UBERON:0010009!3.20e-13!9;UBERON:0010011!3.20e-13!9;UBERON:0000454!3.20e-13!9;UBERON:0004733!3.69e-13!12;UBERON:0002028!3.69e-13!12;UBERON:0007277!3.69e-13!12;UBERON:0002308!5.57e-13!9;UBERON:0000125!5.57e-13!9;UBERON:0000200!3.03e-12!6;UBERON:0004732!5.56e-12!13;UBERON:0000477!2.34e-11!286;UBERON:0000481!3.90e-11!347;UBERON:0000064!5.72e-11!219;UBERON:0001894!7.76e-11!7;UBERON:0006222!7.76e-11!7;UBERON:0000349!9.26e-11!5;UBERON:0002021!1.59e-10!5;UBERON:0001872!2.36e-10!5;UBERON:0003296!8.87e-10!4;UBERON:0010133!8.87e-10!4;UBERON:0000475!9.30e-10!365;UBERON:0009663!1.50e-09!7;UBERON:0000483!2.07e-09!309;UBERON:0000119!3.57e-09!312;UBERON:0000062!5.52e-09!511;UBERON:0002298!6.24e-09!8;UBERON:0002680!1.67e-08!9;UBERON:0001895!1.67e-08!9;UBERON:0010092!1.67e-08!9;UBERON:0000369!1.85e-08!4;UBERON:0002435!1.85e-08!4;UBERON:0000204!1.85e-08!4;UBERON:0010082!1.85e-08!4;UBERON:0002771!2.88e-07!3;UBERON:0000988!3.53e-07!3;UBERON:0005383!5.74e-07!3;UBERON:0005382!5.74e-07!3;UBERON:0000922!6.58e-07!612;UBERON:0002050!8.48e-07!605;UBERON:0005423!8.48e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.91e-49;22!UBERON:0000956;3.66e-43;25!UBERON:0000203;3.66e-43;25!UBERON:0001950;3.53e-41;20!UBERON:0001869;1.20e-35;32!UBERON:0002791;9.00e-35;32!UBERON:0003528;2.43e-34;34!UBERON:0002020;2.43e-34;34!UBERON:0002780;6.41e-34;41!UBERON:0001890;6.41e-34;41!UBERON:0000073;1.58e-33;53!UBERON:0002616;1.58e-33;53!UBERON:0001893;4.17e-32;34!UBERON:0001871;3.24e-24;6!UBERON:0000955;6.85e-23;68!UBERON:0003296;8.90e-21;4!UBERON:0010133;8.90e-21;4!UBERON:0001017;1.50e-20;75!UBERON:0001016;7.04e-17;83!UBERON:0000349;8.40e-16;5!UBERON:0004733;2.08e-14;12!UBERON:0002028;2.08e-14;12!UBERON:0002680;6.70e-14;9!UBERON:0001895;6.70e-14;9!UBERON:0004732;2.97e-13;13!UBERON:0000200;8.96e-13;6!UBERON:0001894;6.45e-12;7!UBERON:0000007;1.73e-11;2!UBERON:0001905;4.83e-11;2!UBERON:0002757;4.83e-11;2!UBERON:0010134;4.83e-11;2!UBERON:0005408;4.83e-11;2!UBERON:0001899;4.83e-11;2!UBERON:0001876;9.87e-11;2!UBERON:0001954;1.01e-10;2!UBERON:0003022;1.01e-10;2!UBERON:0002421;1.01e-10;2!UBERON:0002600;1.01e-10;2!UBERON:0002771;1.14e-10;2!UBERON:0002702;3.79e-10;2!UBERON:0007023;3.87e-10;114!UBERON:0001872;3.69e-09;5!UBERON:0002021;3.69e-09;5!UBERON:0002037;2.90e-08;6!UBERON:0011216;6.34e-08;132!UBERON:0002298;8.81e-08;6!UBERON:0000988;1.56e-07;3!UBERON:0001870;4.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.85e-59,53;UBERON:0002616,1.85e-59,53;UBERON:0001049,5.21e-56,56;UBERON:0005068,5.21e-56,56;UBERON:0006241,5.21e-56,56;UBERON:0007135,5.21e-56,56;UBERON:0000955,9.47e-52,68;UBERON:0006238,9.47e-52,68;UBERON:0002619,4.73e-49,22;UBERON:0001017,5.47e-46,81;UBERON:0002780,1.24e-45,41;UBERON:0001890,1.24e-45,41;UBERON:0003080,1.24e-45,41;UBERON:0006240,1.24e-45,41;UBERON:0001016,5.39e-44,89;UBERON:0000956,5.62e-43,25;UBERON:0000203,5.62e-43,25;UBERON:0001950,5.18e-41,20;UBERON:0003528,8.13e-40,34;UBERON:0002020,8.13e-40,34;UBERON:0002791,1.28e-37,32;UBERON:0001869,1.28e-37,32;UBERON:0003075,1.51e-36,82;UBERON:0007284,1.51e-36,82;UBERON:0001893,3.00e-35,34;UBERON:0002346,1.38e-34,86;UBERON:0007023,1.44e-29,114;UBERON:0003056,2.45e-29,61;UBERON:0010371,1.32e-27,104;UBERON:0010314,2.73e-24,132;UBERON:0001871,4.89e-24,6;UBERON:0003296,7.88e-21,4;UBERON:0010133,7.88e-21,4;UBERON:0004121,4.53e-20,171;UBERON:0000924,4.53e-20,171;UBERON:0006601,4.53e-20,171;UBERON:0011216,2.83e-16,223;UBERON:0000349,8.91e-16,5;UBERON:0004733,1.58e-14,12;UBERON:0002028,1.58e-14,12;UBERON:0007277,1.58e-14,12;UBERON:0002680,5.87e-14,9;UBERON:0001895,5.87e-14,9;UBERON:0010092,5.87e-14,9;UBERON:0000025,1.89e-13,192;UBERON:0004732,2.32e-13,13;UBERON:0000200,6.77e-13,6;UBERON:0001894,6.03e-12,7;UBERON:0006222,6.03e-12,7;UBERON:0003076,1.70e-11,15;UBERON:0003057,1.70e-11,15;UBERON:0000007,1.73e-11,2;UBERON:0001905,4.27e-11,2;UBERON:0002757,4.27e-11,2;UBERON:0010134,4.27e-11,2;UBERON:0005408,4.27e-11,2;UBERON:0001899,4.27e-11,2;UBERON:0001876,9.41e-11,2;UBERON:0001954,1.14e-10,2;UBERON:0003022,1.14e-10,2;UBERON:0002421,1.14e-10,2;UBERON:0002600,1.14e-10,2;UBERON:0002771,1.20e-10,2;UBERON:0002702,2.36e-10,2;UBERON:0004111,1.51e-09,240;UBERON:0002021,4.19e-09,5;UBERON:0001872,4.56e-09,5;UBERON:0002037,2.87e-08,6;UBERON:0006215,2.87e-08,6;UBERON:0002298,6.81e-08,6;UBERON:0000988,1.35e-07,3;UBERON:0001870,3.53e-07,3;UBERON:0000483,6.91e-07,306;UBERON:0000119,9.23e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,2.11004124615769,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.66982576691332,0,0,0,0,0,0,0,0,0,1.21537496453305,2.65722415744152,0.964771509003264,16.7839909948792,5.86070077635491,6.50204761697804,3.07139556015562,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,2.14250933141343,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,2.4023299700675,0.288109595976299,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,1.71690419254628,0,0,0,0,0.0787831823072236,0,0,0,0,7.15706720828373,1.63444087333891,0.160753148465019,0,0,0,0,0.485996453264197,0,0.0788057072991982,0.0524545881349981,0,0,0,2.1440859791201,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.646414781807753,2.77688463659649,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,1.72759505875258,1.77213635993397,5.49118192058834,1.752673029891,0.573409195690071,1.77486482458964,0.745156835296601,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,4.58680480406458,0,0,0,0,0,0,0,0,0,0.449604575675217,2.8339315265117,1.59633859057151,2.05116364240755,0.756215088665154,0.691572524642179,3.55246420390072,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.540300676947157,2.34323429584154,2.68692835451539,0.570742291745161,1.09394961803644,0,0,0,0,13.3925458969572,2.69026977775059,66.7662164660295,15.0257046291856,0,0,0,3.87427477967941,0.657727735628491,0,0,0.156986185701028,0.785577949580009,0,0,0,0,0.0714765441766563,0.47404083519818,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0.701818390386317,38.1985488309827,0.237840181555137,0,0.219881033490858,0.754814217833368,0.231522474323834,0.218559560503957,26.3377685962453,0,1.64973582971138,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0.352894871715692,0,0.730336388246517,0,0,0,0.883889372481891,1.74540276136151,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.227336094654718,0.803892390468535,0,0.620597975171371,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,2.11004124615769,0,0,0,0,0,1.51159648712566,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,1.66982576691332,0,0,0,0,0,0,0,0,0,1.21537496453305,2.65722415744152,0.964771509003264,16.7839909948792,5.86070077635491,6.50204761697804,3.07139556015562,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0.394584402849391,1.20990716048664,2.14250933141343,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633107959558787,0,0,0,0,0,0,2.4023299700675,0.288109595976299,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0,1.71690419254628,0,0,0,0,0.0787831823072236,0,0,0,0,7.15706720828373,1.63444087333891,0.160753148465019,0,0,0,0,0.485996453264197,0,0.0788057072991982,0.0524545881349981,0,0,0,2.1440859791201,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.646414781807753,2.77688463659649,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,1.72759505875258,1.77213635993397,5.49118192058834,1.752673029891,0.573409195690071,1.77486482458964,0.745156835296601,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,4.58680480406458,0,0,0,0,0,0,0,0,0,0.449604575675217,2.8339315265117,1.59633859057151,2.05116364240755,0.756215088665154,0.691572524642179,3.55246420390072,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.540300676947157,2.34323429584154,2.68692835451539,0.570742291745161,1.09394961803644,0,0,0,0,13.3925458969572,2.69026977775059,66.7662164660295,15.0257046291856,0,0,0,3.87427477967941,0.657727735628491,0,0,0.156986185701028,0.785577949580009,0,0,0,0,0.0714765441766563,0.47404083519818,0,0,0,0.207216164163037,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0.701818390386317,38.1985488309827,0.237840181555137,0,0.219881033490858,0.754814217833368,0.231522474323834,0.218559560503957,26.3377685962453,0,1.64973582971138,0.588925401344836,0,0.4226557275834,0,0,0,0,0,0.352894871715692,0,0.730336388246517,0,0,0,0.883889372481891,1.74540276136151,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.227336094654718,0.803892390468535,0,0.620597975171371,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr20:5903185..5903220,+ | |||
}} | }} |
Latest revision as of 16:00, 28 July 2015
Short description: | p@chr20:5903185..5903220, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:5903185..5903220, + |
Coexpression cluster: | C377_pituitary_small_smallcell_cerebellum_pineal_pons_neuroblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data