FFCP PHASE1:Hg19::chr1:86045798..86045809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:86045798..86045809,+ | |||
|description=CAGE_peak_at_chr1:86045798..86045809,+ | |||
|id=chr1:86045798..86045809,+ | |||
|ontology_enrichment_celltype=CL:0002620!3.75e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:1000306;1.13e-13;4!CL:0002547;1.13e-13;4!CL:0002188;3.26e-11;5!CL:0000128;1.89e-08;7!CL:0000126;1.89e-08;7!CL:0000127;1.89e-08;7!CL:1000746;2.18e-08;7!CL:1000612;2.18e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.00e-13,4;CL:0002547,1.00e-13,4;CL:0002188,3.60e-11,5;CL:0000128,1.89e-08,7;CL:0000126,1.89e-08,7;CL:0000127,1.89e-08,7;CL:0002453,1.89e-08,7;CL:1000746,2.35e-08,7;CL:1000612,2.35e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!3.36e-08!29;DOID:120!1.05e-07!27;DOID:17!2.48e-07!5;DOID:450!2.48e-07!5;DOID:66!2.48e-07!5;DOID:423!2.48e-07!5;DOID:0080000!2.48e-07!5;DOID:11722!2.48e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.13e-13;4!UBERON:0000415;1.13e-13;4!UBERON:0007240;1.13e-13;4!UBERON:0005742;1.13e-13;4!UBERON:0005734;1.13e-13;4!UBERON:0004664;1.13e-13;4!UBERON:0004663;1.13e-13;4!UBERON:0000947;1.77e-10;21!UBERON:0010191;1.77e-10;21!UBERON:0000074;2.18e-08;7!UBERON:0001229;2.18e-08;7!UBERON:0004573;3.69e-07;33!UBERON:0004571;3.69e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.00e-13,4;UBERON:0007240,1.00e-13,4;UBERON:0005742,1.00e-13,4;UBERON:0005734,1.00e-13,4;UBERON:0004664,1.00e-13,4;UBERON:0004663,1.00e-13,4;UBERON:0000947,1.69e-10,21;UBERON:0010191,1.69e-10,21;UBERON:0004797,2.03e-08,7;UBERON:0010532,2.35e-08,7;UBERON:0000074,2.35e-08,7;UBERON:0001229,2.35e-08,7;UBERON:0001230,2.35e-08,7;UBERON:0003220,2.35e-08,7;UBERON:0005749,2.35e-08,7;UBERON:0004199,2.35e-08,7;UBERON:0004209,2.35e-08,7;UBERON:0004198,2.35e-08,7;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0004573,4.74e-07,33;UBERON:0004571,4.74e-07,33;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.661743720148475,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0.35576626268671,0,0.805658634218294,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0.949265659568129,0,0,0,0,0,0.12663051166458,1.58891016975863,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0.427114777637135,0.211931901159562,0.600182192168805,0.103052529238439,0.515281080091258,0.18611685633159,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0.721879481669586,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.535286966391485,0.157702415033935,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,1.13733384070897,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0,1.25924938732256,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0.78494864019923,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0.111308705022906,0,0,0,0,0,2.14764233254525,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0.32681539055697,0.139423744278603,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0.995261931078505,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.34823682632161,0,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0,0.400794101257669,0.213452994739353,0,0,0,0,0,0.248505071130865,0,0,0,0.305994652908965,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0.0788057072991982,0,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.378806010550178,0.251567901752575,0,0,0.453692771289717,0.466311601748341,0,0.318593534327405,0,0.465788870628778,0,0,0,0.150257608997218,0.761610424337591,0,0.363697318405119,0.214821114084977,0.928067519756987,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0.231522474323834,0.734210113519403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0,0,0,0,0,0.354581522651905,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454,0,0,0,0,0,0,0,0,0.213454691755431,0,0.0898252021065869,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p@chr1:86045798..86045809,+ | |||
}} | }} |
Latest revision as of 10:52, 28 July 2015
Short description: | p@chr1:86045798..86045809, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:86045798..86045809, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.00e-13 | 4 |
fibroblast of the aortic adventitia | 1.00e-13 | 4 |
glomerular endothelial cell | 3.60e-11 | 5 |
oligodendrocyte | 1.89e-08 | 7 |
macroglial cell | 1.89e-08 | 7 |
astrocyte | 1.89e-08 | 7 |
oligodendrocyte precursor cell | 1.89e-08 | 7 |
glomerular cell | 2.35e-08 | 7 |
kidney corpuscule cell | 2.35e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.00e-13 | 4 |
tunica adventitia of artery | 1.00e-13 | 4 |
adventitia | 1.00e-13 | 4 |
tunica adventitia of blood vessel | 1.00e-13 | 4 |
aorta tunica adventitia | 1.00e-13 | 4 |
aorta wall | 1.00e-13 | 4 |
aorta | 1.69e-10 | 21 |
aortic system | 1.69e-10 | 21 |
blood vessel layer | 2.03e-08 | 7 |
primitive nephron | 2.35e-08 | 7 |
renal glomerulus | 2.35e-08 | 7 |
renal corpuscle | 2.35e-08 | 7 |
glomerular capsule | 2.35e-08 | 7 |
metanephric mesenchyme | 2.35e-08 | 7 |
glomerular tuft | 2.35e-08 | 7 |
S-shaped body | 2.35e-08 | 7 |
renal vesicle | 2.35e-08 | 7 |
comma-shaped body | 2.35e-08 | 7 |
mesonephric epithelium | 1.80e-07 | 8 |
mesonephric tubule | 1.80e-07 | 8 |
nephric duct | 1.80e-07 | 8 |
renal duct | 1.80e-07 | 8 |
mesonephric duct | 1.80e-07 | 8 |
pronephric duct | 1.80e-07 | 8 |
systemic artery | 4.74e-07 | 33 |
systemic arterial system | 4.74e-07 | 33 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |