FFCP PHASE1:Hg19::chr1:78695274..78695292,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=149047 | |EntrezGene=149047 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000436742,NR_027310,uc001dil.1,uc009wcc.2_5end | |||
|cluster_id=chr1:78695274..78695292,+ | |||
|description=CAGE_peak_1_at_MGC27382_5end | |||
|id=chr1:78695274..78695292,+ | |||
|ontology_enrichment_celltype=CL:0000188!1.23e-12!9;CL:0002564!1.56e-08!3;CL:0000594!3.04e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0002564;3.11e-27;3!CL:0000188;3.38e-24;9!CL:0002602;6.71e-19;2!CL:0000594;4.47e-13;3!CL:0000680;4.16e-12;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,3.26e-27,3;CL:0000188,3.08e-24,9;CL:0002602,7.03e-19,2;CL:0000594,4.61e-13,3;CL:0002540,9.42e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!4.65e-09!238;UBERON:0009142!4.65e-09!238;UBERON:0002242!1.56e-08!3;UBERON:0003068!1.56e-08!3;UBERON:0002328!1.56e-08!3;UBERON:0004880!1.56e-08!3;UBERON:0000481!7.15e-08!347;UBERON:0000161!2.09e-07!35;UBERON:0005256!7.00e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;2.66e-44;5!UBERON:0002216;2.66e-44;5!UBERON:0011134;2.66e-44;5!UBERON:0002209;2.66e-44;5!UBERON:0002213;2.66e-44;5!UBERON:0007844;2.66e-44;5!UBERON:0011138;2.66e-44;5!UBERON:0001130;2.66e-44;5!UBERON:0001066;2.66e-44;5!UBERON:0001468;2.66e-44;5!UBERON:0004905;1.07e-27;8!UBERON:0000982;1.07e-27;8!UBERON:0004770;1.07e-27;8!UBERON:0002242;3.11e-27;3!UBERON:0001134;2.99e-19;16!UBERON:0002036;2.99e-19;16!UBERON:0006444;6.71e-19;2!UBERON:0001995;6.71e-19;2!UBERON:0004715;6.71e-19;2!UBERON:0004765;6.37e-16;26!UBERON:0000075;8.27e-14;16!UBERON:0002418;6.39e-13;3!UBERON:0004755;6.39e-13;3!UBERON:0002204;1.14e-10;70!UBERON:0002171;1.89e-10;1!UBERON:0006518;1.89e-10;1!UBERON:0008949;1.89e-10;1!UBERON:0000101;1.89e-10;1!UBERON:0002167;1.89e-10;1!UBERON:0002385;1.71e-09;31!UBERON:0001015;1.71e-09;31!UBERON:0000383;1.71e-09;31!UBERON:0001434;1.92e-08;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,2.92e-44,5;UBERON:0002216,2.92e-44,5;UBERON:0011134,2.92e-44,5;UBERON:0002209,2.92e-44,5;UBERON:0002213,2.92e-44,5;UBERON:0005856,2.92e-44,5;UBERON:0005866,2.92e-44,5;UBERON:0005863,2.92e-44,5;UBERON:0007844,2.92e-44,5;UBERON:0011138,2.92e-44,5;UBERON:0001130,2.92e-44,5;UBERON:0001066,2.92e-44,5;UBERON:0001468,2.92e-44,5;UBERON:0004905,1.13e-27,8;UBERON:0000982,1.13e-27,8;UBERON:0004770,1.13e-27,8;UBERON:0002242,3.26e-27,3;UBERON:0003068,3.26e-27,3;UBERON:0002328,3.26e-27,3;UBERON:0004880,3.26e-27,3;UBERON:0006444,7.03e-19,2;UBERON:0001995,7.03e-19,2;UBERON:0004715,7.03e-19,2;UBERON:0000075,8.50e-14,16;UBERON:0002418,6.58e-13,3;UBERON:0004755,6.58e-13,3;UBERON:0003104,3.88e-11,160;UBERON:0009142,3.88e-11,160;UBERON:0002171,1.80e-10,1;UBERON:0006518,1.80e-10,1;UBERON:0008949,1.80e-10,1;UBERON:0000101,1.80e-10,1;UBERON:0002167,1.80e-10,1;UBERON:0002204,8.22e-08,167 | |||
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| ||
|short_description=p1@MGC27382 | |||
}} | }} |
Latest revision as of 08:30, 19 September 2015
Short description: | p1@MGC27382 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MGC27382_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000436742, NR_027310, uc001dil.1, uc009wcc.2_5end |
EntrezGene: | MGC27382 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 3.26e-27 | 3 |
cell of skeletal muscle | 3.08e-24 | 9 |
annulus pulposus cell | 7.03e-19 | 2 |
skeletal muscle satellite cell | 4.61e-13 | 3 |
mesenchymal stem cell of the bone marrow | 9.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 2.92e-44 | 5 |
symphysis | 2.92e-44 | 5 |
nonsynovial joint | 2.92e-44 | 5 |
fibrous joint | 2.92e-44 | 5 |
cartilaginous joint | 2.92e-44 | 5 |
developing mesenchymal condensation | 2.92e-44 | 5 |
pre-cartilage condensation | 2.92e-44 | 5 |
cartilaginous condensation | 2.92e-44 | 5 |
cartilage element | 2.92e-44 | 5 |
post-cranial axial skeletal system | 2.92e-44 | 5 |
vertebral column | 2.92e-44 | 5 |
intervertebral disk | 2.92e-44 | 5 |
intervertebral joint | 2.92e-44 | 5 |
articulation | 1.13e-27 | 8 |
skeletal joint | 1.13e-27 | 8 |
articular system | 1.13e-27 | 8 |
nucleus pulposus | 3.26e-27 | 3 |
axial mesoderm | 3.26e-27 | 3 |
notochord | 3.26e-27 | 3 |
chordamesoderm | 3.26e-27 | 3 |
annulus fibrosus | 7.03e-19 | 2 |
fibrocartilage | 7.03e-19 | 2 |
annulus fibrosus disci intervertebralis | 7.03e-19 | 2 |
subdivision of skeletal system | 8.50e-14 | 16 |
cartilage tissue | 6.58e-13 | 3 |
skeletal tissue | 6.58e-13 | 3 |
mesenchyme | 3.88e-11 | 160 |
entire embryonic mesenchyme | 3.88e-11 | 160 |
lower lobe of right lung | 1.80e-10 | 1 |
right lung lobe | 1.80e-10 | 1 |
lower lobe of lung | 1.80e-10 | 1 |
lobe of lung | 1.80e-10 | 1 |
right lung | 1.80e-10 | 1 |
musculoskeletal system | 8.22e-08 | 167 |