FFCP PHASE1:Hg19::chr1:70033589..70033627,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:70033589..70033627,+ to FFCP PHASE1:Hg19::chr1:70033589..70033627,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57554 | |EntrezGene=57554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18531 | |HGNC=18531 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-453bp_to_ENST00000310961_5end | |||
|cluster_id=chr1:70033589..70033627,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_LRRC7_5end | |||
|id=chr1:70033589..70033627,+ | |||
|ontology_enrichment_celltype=CL:0002319!4.58e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.31e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.31e-46!94;UBERON:0001016!8.31e-46!94;UBERON:0005743!1.63e-44!86;UBERON:0001017!1.26e-43!82;UBERON:0001049!2.76e-38!57;UBERON:0005068!2.76e-38!57;UBERON:0006241!2.76e-38!57;UBERON:0007135!2.76e-38!57;UBERON:0007023!2.19e-36!115;UBERON:0000955!3.47e-35!69;UBERON:0006238!3.47e-35!69;UBERON:0002616!1.99e-32!59;UBERON:0001893!3.41e-31!34;UBERON:0002020!5.63e-31!34;UBERON:0003528!5.63e-31!34;UBERON:0002780!6.02e-31!41;UBERON:0001890!6.02e-31!41;UBERON:0006240!6.02e-31!41;UBERON:0003075!6.71e-31!86;UBERON:0007284!6.71e-31!86;UBERON:0002791!2.98e-30!33;UBERON:0003080!7.92e-30!42;UBERON:0001869!1.75e-29!32;UBERON:0002346!1.95e-28!90;UBERON:0004121!2.59e-25!169;UBERON:0000924!5.50e-24!173;UBERON:0006601!5.50e-24!173;UBERON:0000153!1.18e-23!129;UBERON:0007811!1.18e-23!129;UBERON:0000033!2.61e-23!123;UBERON:0003056!2.83e-23!61;UBERON:0002619!3.28e-23!22;UBERON:0000956!1.78e-22!25;UBERON:0000203!1.78e-22!25;UBERON:0001950!2.87e-21!20;UBERON:0002420!2.12e-10!9;UBERON:0007245!2.12e-10!9;UBERON:0010009!2.12e-10!9;UBERON:0010011!2.12e-10!9;UBERON:0000454!2.12e-10!9;UBERON:0002308!6.48e-10!9;UBERON:0000125!6.48e-10!9;UBERON:0003076!1.73e-09!15;UBERON:0003057!1.73e-09!15;UBERON:0001871!5.14e-09!7;UBERON:0000025!8.34e-09!194;UBERON:0009663!2.24e-08!7;UBERON:0004732!5.62e-08!13;UBERON:0000064!1.26e-07!219;UBERON:0004733!2.75e-07!12;UBERON:0002028!2.75e-07!12;UBERON:0007277!2.75e-07!12;UBERON:0000200!4.26e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.60e-41;34!UBERON:0001869;2.03e-41;32!UBERON:0002791;2.46e-41;32!UBERON:0003528;2.88e-41;34!UBERON:0002020;2.88e-41;34!UBERON:0002619;1.53e-39;22!UBERON:0001950;3.92e-36;20!UBERON:0002780;8.20e-35;41!UBERON:0001890;8.20e-35;41!UBERON:0000956;4.64e-34;25!UBERON:0000203;4.64e-34;25!UBERON:0000073;1.35e-29;53!UBERON:0002616;1.35e-29;53!UBERON:0001017;1.26e-21;75!UBERON:0000955;3.10e-20;68!UBERON:0001016;7.62e-19;83!UBERON:0002420;5.29e-17;9!UBERON:0007245;5.29e-17;9!UBERON:0010009;5.29e-17;9!UBERON:0010011;5.29e-17;9!UBERON:0000454;5.29e-17;9!UBERON:0000125;3.94e-16;9!UBERON:0002308;3.94e-16;9!UBERON:0009663;1.80e-13;7!UBERON:0001871;5.37e-13;6!UBERON:0000200;3.00e-11;6!UBERON:0000349;2.33e-10;5!UBERON:0002021;5.76e-10;5!UBERON:0001872;9.56e-10;5!UBERON:0002298;4.31e-09;6!UBERON:0000369;6.27e-09;4!UBERON:0002435;6.27e-09;4!UBERON:0000204;6.27e-09;4!UBERON:0004732;3.08e-08;13!UBERON:0011216;3.71e-08;132!UBERON:0007023;5.85e-08;114!UBERON:0004733;3.49e-07;12!UBERON:0002028;3.49e-07;12!UBERON:0005383;4.13e-07;3!UBERON:0005382;4.13e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.64e-57,56;UBERON:0005068,2.64e-57,56;UBERON:0006241,2.64e-57,56;UBERON:0007135,2.64e-57,56;UBERON:0001017,7.80e-54,81;UBERON:0000073,3.84e-53,53;UBERON:0002616,3.84e-53,53;UBERON:0001016,1.34e-52,89;UBERON:0001893,3.40e-49,34;UBERON:0003528,7.90e-49,34;UBERON:0002020,7.90e-49,34;UBERON:0002780,4.73e-48,41;UBERON:0001890,4.73e-48,41;UBERON:0003080,4.73e-48,41;UBERON:0006240,4.73e-48,41;UBERON:0000955,2.26e-46,68;UBERON:0006238,2.26e-46,68;UBERON:0001869,3.38e-46,32;UBERON:0002791,5.46e-46,32;UBERON:0003075,9.52e-42,82;UBERON:0007284,9.52e-42,82;UBERON:0002619,1.68e-39,22;UBERON:0002346,4.39e-39,86;UBERON:0001950,4.39e-36,20;UBERON:0003056,3.57e-34,61;UBERON:0000956,5.05e-34,25;UBERON:0000203,5.05e-34,25;UBERON:0010371,1.70e-32,104;UBERON:0007023,5.10e-28,114;UBERON:0010314,5.58e-26,132;UBERON:0004121,3.29e-25,171;UBERON:0000924,3.29e-25,171;UBERON:0006601,3.29e-25,171;UBERON:0011216,5.78e-24,223;UBERON:0002420,5.16e-17,9;UBERON:0007245,5.16e-17,9;UBERON:0010009,5.16e-17,9;UBERON:0010011,5.16e-17,9;UBERON:0000454,5.16e-17,9;UBERON:0000125,3.65e-16,9;UBERON:0002308,3.65e-16,9;UBERON:0009663,1.77e-13,7;UBERON:0000025,5.56e-13,192;UBERON:0001871,5.63e-13,6;UBERON:0000200,3.00e-11,6;UBERON:0003076,1.09e-10,15;UBERON:0003057,1.09e-10,15;UBERON:0000349,2.25e-10,5;UBERON:0002021,5.87e-10,5;UBERON:0001872,1.01e-09,5;UBERON:0002298,3.54e-09,6;UBERON:0000369,6.16e-09,4;UBERON:0002435,6.16e-09,4;UBERON:0000204,6.16e-09,4;UBERON:0010082,6.16e-09,4;UBERON:0004732,2.69e-08,13;UBERON:0004111,4.26e-08,240;UBERON:0000483,5.66e-08,306;UBERON:0000119,9.53e-08,309;UBERON:0004733,3.22e-07,12;UBERON:0002028,3.22e-07,12;UBERON:0007277,3.22e-07,12;UBERON:0005383,4.10e-07,3;UBERON:0005382,4.10e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,2.33930010345897,0.204000691244253,2.5076377718247,0,0.273748850145768,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.360517241366,0,0.205601498999509,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0.444859689486181,1.07016331235885,5.22677619024884,0,0,0,0.506039384039006,0.318565414324097,0,0,0.301150238155546,0.255973222308837,0,0,0,0.201606743224732,0,3.33096128930438,0,0,0.639312809217652,0,0,0,0,0,0.378139268656271,0,0.175669571386252,2.61958150995425,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0,0.772921620136887,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0.492663237895943,0,0,0,0.12624243342638,0,0,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,1.50719688529793,0.871533458600294,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.385029108839245,0.76228387266739,58.5629342359298,50.2637728305502,35.3459319855476,32.5348763343113,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.15714200818617,0.213455115606889,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0.984043937099117,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,0,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,2.88743956579008,0,0,4.61661481524624,0,0.797131363644112,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,13.5396138842484,4.59774653409171,11.3244469119259,9.86909035614947,0,0,0,0.111443384277478,0,0,0.296964680832639,0,28.8302817852226,26.8678585344079,0,0,0,0.398495976502139,0,0,0.306806047506464,0,2.17727711363265,0,0,0,0.197286811273867,0,0,19.3866549219044,11.6887803683933,25.9497937401552,0,0,0,0,0.254253650292766,0,0,0,1.04174996959975,31.0009485034844,50.4093113454205,0,0.331737779793674,0.295547618953547,8.33664509185096,2.50558466093677,0.139423744278603,1.23120413606075,27.1182092915863,0,0,0,0,0,0,0,0,0.166211681900156,0.676786981851542,0,0.167821586975843,0,0,0,0,3.1097675715467,0,0,0.619202951523374,4.27721101453538,0,0,0,10.851582409889,1.60515529459758,24.1292379097099,0,0,0,0,1.20990716048664,102.840447907845,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,1.588610280447,0.90392296312213,0,0,23.4249945036751,0,0.240476460754601,2.98834192635094,0,0,0.114536596165916,0,0,0,0,0.951329442515298,0.209205692624666,0.509991088181609,0,19.8138695274231,12.5952948580634,0,3.0083580899397,0,3.90995361781156,0,0,0.199679000498991,0,0.669514372325618,0.201550417460179,0,0,0,0,0,2.95282444544246,0,20.6759719350419,21.9287483839637,0,0.137539436597234,0.83088067605837,0,0,26.1830589196086,0,0.472834243795189,1.04909176269996,0,0.179287339332845,1.72723677587501,3.57347663186684,0,0,0,0,0,9.578415324999,0.082092520749339,0,0,0.146552233678082,0,4.78346938537737,3.43804764530994,0,0,0,0.471612915298998,0,0.496166021811951,0,0,2.55336503108073,0,0,0,0,0.157054096250234,12.4049545195378,20.3783862386278,16.9007756453775,1.72022758707021,1.66393577305278,3.16691655001056,1.10678907948985,0,0,0,0,0,2.75349954360568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,6.7858515910955,0.226705925512272,25.0044272269741,0,3.40268798054826,0,2.19284049578707,0.176689145945881,1.15748422962549,0,0.256241518587947,0,0,18.8031473166354,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0.76736622782191,0.215649622793364,1.10086159299127,5.02364335683264,0,0,0,0,0.318004350653419,0,0,0,0,35.3903030281492,15.5866233958143,14.2074134560865,21.3321018810385,77.3860107400675,14.1772367551647,23.2524929709866,2.85538840518309,0.490738592505128,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0.163771917510097,0,14.7907310314284,9.37293718336617,17.5683777026006,13.4441517611082,79.85832211666,0,1.48863353516788,0,0,0,0,0.606965604236632,0,0.177404740325278,0,3.08678416987353,3.12660771693426,12.2995086562528,0,0,0.235479278551542,51.5339134924486,0,8.21842848458546,9.50081401361934,0,1.1436247068265,0,0,7.12818916440576,0,0,0,0,0,0,0,0.423387050190929,0.9164274741762,0,0,0.223710863595585,0,0,0,2.15591894398119,11.598144313382,2.4285549652957,0,0,0,0.33883824611688,0,7.24621649120033,0.540219106755613,3.93407208907123,6.5844421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| ||
|short_description=p1@LRRC7 | |||
}} | }} |
Latest revision as of 03:31, 19 September 2015
Short description: | p1@LRRC7 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRRC7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -453bp_to_ENST00000310961_5end |
EntrezGene: | LRRC7 |
HGNC: | 18531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data