FFCP PHASE1:Hg19::chr1:70033093..70033106,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:70033093..70033106,+ to FFCP PHASE1:Hg19::chr1:70033093..70033106,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57554 | |EntrezGene=57554 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=18531 | |HGNC=18531 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NW7 | |UniProt=Q96NW7 | ||
|association_with_transcript=225bp_to_uc001deo.1_5end | |||
|cluster_id=chr1:70033093..70033106,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_10_at_LRRC7_5end | |||
|id=chr1:70033093..70033106,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.22e-12;2!UBERON:0006601;6.02e-11;82!UBERON:0006222;4.01e-07;1!UBERON:0010227;9.23e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.52e-79!57;UBERON:0005068!1.52e-79!57;UBERON:0006241!1.52e-79!57;UBERON:0007135!1.52e-79!57;UBERON:0001893!7.59e-74!34;UBERON:0002020!1.04e-73!34;UBERON:0003528!1.04e-73!34;UBERON:0002791!4.81e-71!33;UBERON:0001017!7.14e-70!82;UBERON:0002780!5.98e-69!41;UBERON:0001890!5.98e-69!41;UBERON:0006240!5.98e-69!41;UBERON:0001869!8.52e-69!32;UBERON:0003080!3.93e-67!42;UBERON:0005743!3.84e-66!86;UBERON:0002616!3.32e-65!59;UBERON:0000955!2.10e-63!69;UBERON:0006238!2.10e-63!69;UBERON:0000073!1.50e-61!94;UBERON:0001016!1.50e-61!94;UBERON:0002619!2.11e-56!22;UBERON:0003075!4.58e-52!86;UBERON:0007284!4.58e-52!86;UBERON:0001950!1.52e-50!20;UBERON:0002346!2.78e-49!90;UBERON:0000956!3.46e-49!25;UBERON:0000203!3.46e-49!25;UBERON:0003056!9.33e-44!61;UBERON:0007023!2.15e-42!115;UBERON:0000033!5.97e-35!123;UBERON:0000153!7.87e-33!129;UBERON:0007811!7.87e-33!129;UBERON:0004121!2.15e-32!169;UBERON:0000924!2.25e-31!173;UBERON:0006601!2.25e-31!173;UBERON:0002420!6.13e-27!9;UBERON:0007245!6.13e-27!9;UBERON:0010009!6.13e-27!9;UBERON:0010011!6.13e-27!9;UBERON:0000454!6.13e-27!9;UBERON:0002308!5.82e-26!9;UBERON:0000125!5.82e-26!9;UBERON:0009663!6.85e-21!7;UBERON:0000025!2.62e-19!194;UBERON:0001871!3.68e-19!7;UBERON:0002298!1.95e-16!8;UBERON:0000349!2.76e-16!5;UBERON:0001872!6.52e-16!5;UBERON:0002021!8.32e-16!5;UBERON:0004111!2.82e-14!241;UBERON:0003076!8.55e-14!15;UBERON:0003057!8.55e-14!15;UBERON:0000369!2.51e-13!4;UBERON:0002435!2.51e-13!4;UBERON:0000204!2.51e-13!4;UBERON:0010082!2.51e-13!4;UBERON:0000200!5.35e-13!6;UBERON:0000064!5.84e-13!219;UBERON:0000477!1.29e-12!286;UBERON:0000483!1.53e-11!309;UBERON:0000119!2.55e-11!312;UBERON:0005383!1.32e-10!3;UBERON:0005382!1.32e-10!3;UBERON:0002771!2.54e-10!3;UBERON:0000988!2.72e-09!3;UBERON:0002240!2.81e-09!3;UBERON:0006331!3.75e-09!3;UBERON:0001896!5.76e-09!3;UBERON:0005290!5.76e-09!3;UBERON:0010096!5.76e-09!3;UBERON:0000475!1.07e-08!365;UBERON:0004733!5.94e-08!12;UBERON:0002028!5.94e-08!12;UBERON:0007277!5.94e-08!12;UBERON:0001876!9.22e-08!2;UBERON:0001873!1.44e-07!2;UBERON:0010122!1.44e-07!2;UBERON:0001954!1.74e-07!2;UBERON:0003022!1.74e-07!2;UBERON:0002421!1.74e-07!2;UBERON:0002600!1.74e-07!2;UBERON:0004732!2.73e-07!13;UBERON:0000062!4.30e-07!511;UBERON:0001875!6.49e-07!2;UBERON:0006514!6.49e-07!2;UBERON:0002148!9.27e-07!2;UBERON:0009662!9.27e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.90e-89;32!UBERON:0002791;7.32e-85;32!UBERON:0002619;1.49e-84;22!UBERON:0001893;1.87e-81;34!UBERON:0003528;5.69e-77;34!UBERON:0002020;5.69e-77;34!UBERON:0000956;2.50e-74;25!UBERON:0000203;2.50e-74;25!UBERON:0001950;3.33e-74;20!UBERON:0002780;9.50e-62;41!UBERON:0001890;9.50e-62;41!UBERON:0000073;3.56e-35;53!UBERON:0002616;3.56e-35;53!UBERON:0002420;3.73e-30;9!UBERON:0007245;3.73e-30;9!UBERON:0010009;3.73e-30;9!UBERON:0010011;3.73e-30;9!UBERON:0000454;3.73e-30;9!UBERON:0001871;9.26e-29;6!UBERON:0000349;3.14e-28;5!UBERON:0001017;3.50e-28;75!UBERON:0000955;5.99e-28;68!UBERON:0000369;5.42e-23;4!UBERON:0002435;5.42e-23;4!UBERON:0000204;5.42e-23;4!UBERON:0009663;5.48e-20;7!UBERON:0001016;1.59e-19;83!UBERON:0001872;1.59e-18;5!UBERON:0002021;2.23e-18;5!UBERON:0005383;5.94e-18;3!UBERON:0005382;5.94e-18;3!UBERON:0000125;1.66e-15;9!UBERON:0002308;1.66e-15;9!UBERON:0000200;3.49e-15;6!UBERON:0001876;9.64e-13;2!UBERON:0001873;2.22e-12;2!UBERON:0002771;3.21e-12;2!UBERON:0001954;3.21e-12;2!UBERON:0003022;3.21e-12;2!UBERON:0002421;3.21e-12;2!UBERON:0002600;3.21e-12;2!UBERON:0007023;2.04e-10;114!UBERON:0011216;6.42e-10;132!UBERON:0001870;1.97e-08;3!UBERON:0010314;1.00e-07;132!UBERON:0001874;2.73e-07;1!UBERON:0002022;4.01e-07;1!UBERON:0003112;4.01e-07;1!UBERON:0011158;4.01e-07;1!UBERON:0003128;4.01e-07;1!UBERON:0001703;4.01e-07;1!UBERON:0002241;4.01e-07;1!UBERON:0001882;9.23e-07;1!UBERON:0002079;9.23e-07;1!UBERON:0007190;9.23e-07;1!UBERON:0005403;9.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.73e-101,32;UBERON:0001893,2.13e-95,34;UBERON:0002791,1.77e-93,32;UBERON:0003528,7.50e-88,34;UBERON:0002020,7.50e-88,34;UBERON:0002780,2.17e-85,41;UBERON:0001890,2.17e-85,41;UBERON:0003080,2.17e-85,41;UBERON:0006240,2.17e-85,41;UBERON:0002619,9.05e-85,22;UBERON:0000956,1.61e-74,25;UBERON:0000203,1.61e-74,25;UBERON:0001950,2.76e-74,20;UBERON:0001049,1.78e-66,56;UBERON:0005068,1.78e-66,56;UBERON:0006241,1.78e-66,56;UBERON:0007135,1.78e-66,56;UBERON:0000073,3.08e-65,53;UBERON:0002616,3.08e-65,53;UBERON:0001017,5.32e-59,81;UBERON:0000955,1.48e-57,68;UBERON:0006238,1.48e-57,68;UBERON:0003056,3.93e-56,61;UBERON:0001016,1.18e-52,89;UBERON:0003075,6.17e-44,82;UBERON:0007284,6.17e-44,82;UBERON:0002346,1.16e-41,86;UBERON:0010371,1.43e-33,104;UBERON:0002420,3.92e-30,9;UBERON:0007245,3.92e-30,9;UBERON:0010009,3.92e-30,9;UBERON:0010011,3.92e-30,9;UBERON:0000454,3.92e-30,9;UBERON:0010314,7.88e-30,132;UBERON:0001871,8.26e-29,6;UBERON:0000349,1.84e-28,5;UBERON:0007023,1.04e-27,114;UBERON:0004121,4.98e-25,171;UBERON:0000924,4.98e-25,171;UBERON:0006601,4.98e-25,171;UBERON:0000369,4.86e-23,4;UBERON:0002435,4.86e-23,4;UBERON:0000204,4.86e-23,4;UBERON:0010082,4.86e-23,4;UBERON:0011216,1.67e-22,223;UBERON:0009663,7.13e-20,7;UBERON:0001872,1.96e-18,5;UBERON:0002021,2.34e-18,5;UBERON:0005383,4.61e-18,3;UBERON:0005382,4.61e-18,3;UBERON:0000025,3.56e-17,192;UBERON:0000125,2.03e-15,9;UBERON:0002308,2.03e-15,9;UBERON:0000200,4.20e-15,6;UBERON:0001876,7.02e-13,2;UBERON:0004111,1.32e-12,240;UBERON:0001873,1.58e-12,2;UBERON:0010122,1.58e-12,2;UBERON:0001954,2.22e-12,2;UBERON:0003022,2.22e-12,2;UBERON:0002421,2.22e-12,2;UBERON:0002600,2.22e-12,2;UBERON:0002771,3.70e-12,2;UBERON:0000483,1.17e-08,306;UBERON:0001870,1.54e-08,3;UBERON:0000119,1.61e-08,309;UBERON:0001874,2.99e-07,1;UBERON:0002022,3.78e-07,1;UBERON:0003112,4.78e-07,1;UBERON:0011158,4.78e-07,1;UBERON:0003128,4.78e-07,1;UBERON:0001703,4.78e-07,1;UBERON:0002241,4.78e-07,1;UBERON:0004761,4.78e-07,1;UBERON:0009617,4.78e-07,1;UBERON:0002079,8.49e-07,1 | |||
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|short_description=p10@LRRC7 | |||
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Latest revision as of 03:28, 19 September 2015
Short description: | p10@LRRC7 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LRRC7_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 225bp_to_uc001deo.1_5end |
EntrezGene: | LRRC7 |
HGNC: | 18531 |
UniProt: | Q96NW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data