FFCP PHASE1:Hg19::chr1:21011770..21011803,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:21011770..21011803,- to FFCP PHASE1:Hg19::chr1:21011770..21011803,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57576 | |EntrezGene=57576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19167 | |HGNC=19167 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000462858,uc001bdq.3_5end | |||
|cluster_id=chr1:21011770..21011803,- | |||
|description=CAGE_peak_2_at_KIF17_5end | |||
|id=chr1:21011770..21011803,- | |||
|ontology_enrichment_celltype=CL:0000115!9.67e-16!35;CL:0002139!1.76e-11!24;CL:0002078!5.67e-11!44;CL:0005020!7.17e-10!6;CL:0002138!7.17e-10!6;CL:0005022!7.17e-10!6;CL:0000213!6.34e-07!57;CL:0000215!6.34e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.30e-18;36!CL:0002138;1.32e-17;6!CL:0002139;9.87e-17;24!CL:0002078;2.59e-11;45!CL:0002144;1.06e-09;3!CL:0002188;1.30e-09;5!CL:0000213;4.00e-08;58!CL:0000215;4.00e-08;58!CL:0002618;6.85e-08;3!CL:1000746;7.86e-07;7!CL:1000612;7.86e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.51e-23,36;CL:0002078,1.39e-17,45;CL:0005020,1.41e-17,6;CL:0002138,1.41e-17,6;CL:0005022,1.41e-17,6;CL:0002139,1.17e-16,24;CL:0000213,1.75e-12,58;CL:0000215,1.75e-12,58;CL:0002144,1.08e-09,3;CL:0002188,1.24e-09,5;CL:0002618,9.49e-08,3;CL:1000746,7.60e-07,7;CL:1000612,7.60e-07,7 | |||
|ontology_enrichment_development_v019=CL:0005022;1.32e-17;6!UBERON:0004872;1.63e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.18e-43!115;UBERON:0004111!3.90e-14!241;UBERON:0000477!1.40e-12!286;UBERON:0001049!2.29e-12!57;UBERON:0005068!2.29e-12!57;UBERON:0006241!2.29e-12!57;UBERON:0007135!2.29e-12!57;UBERON:0000025!4.28e-12!194;UBERON:0001893!6.04e-10!34;UBERON:0002616!7.08e-10!59;UBERON:0003080!1.00e-09!42;UBERON:0003075!1.70e-09!86;UBERON:0007284!1.70e-09!86;UBERON:0002791!2.18e-09!33;UBERON:0002780!4.37e-09!41;UBERON:0001890!4.37e-09!41;UBERON:0006240!4.37e-09!41;UBERON:0002020!6.48e-09!34;UBERON:0003528!6.48e-09!34;UBERON:0002465!8.18e-09!10;UBERON:0001869!8.91e-09!32;UBERON:0002346!1.21e-08!90;UBERON:0001017!1.31e-08!82;UBERON:0005743!1.63e-08!86;UBERON:0000467!4.38e-08!625;UBERON:0000480!5.16e-08!626;UBERON:0000119!7.87e-08!312;UBERON:0000955!8.27e-08!69;UBERON:0006238!8.27e-08!69;UBERON:0000073!1.60e-07!94;UBERON:0001016!1.60e-07!94;UBERON:0000483!2.49e-07!309;UBERON:0000468!4.35e-07!659;UBERON:0001473!4.75e-07!8;UBERON:0004536!4.75e-07!8;UBERON:0006558!4.75e-07!8;UBERON:0000956!9.37e-07!25;UBERON:0000203!9.37e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002465;2.27e-13;10!UBERON:0001473;5.59e-13;8!UBERON:0004536;5.59e-13;8!UBERON:0006558;5.59e-13;8!UBERON:0010523;1.06e-09;3!UBERON:0001915;1.06e-09;3!UBERON:0001982;1.06e-09;3!UBERON:0004151;1.78e-08;3!UBERON:0000074;7.86e-07;7!UBERON:0001229;7.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.13e-13,10;UBERON:0001473,5.88e-13,8;UBERON:0004536,5.88e-13,8;UBERON:0006558,5.88e-13,8;UBERON:0007023,6.14e-13,114;UBERON:0003887,4.09e-10,12;UBERON:0010523,1.08e-09,3;UBERON:0001915,1.08e-09,3;UBERON:0001982,1.08e-09,3;UBERON:0005103,1.42e-08,8;UBERON:0000083,1.42e-08,8;UBERON:0009201,1.42e-08,8;UBERON:0006553,1.42e-08,8;UBERON:0003074,1.42e-08,8;UBERON:0003060,1.42e-08,8;UBERON:0004151,1.49e-08,3;UBERON:0000080,1.43e-07,9;UBERON:0002120,1.43e-07,9;UBERON:0004875,1.43e-07,9;UBERON:0005721,1.43e-07,9;UBERON:0005754,1.43e-07,9;UBERON:0007297,1.43e-07,9;UBERON:0000055,2.12e-07,68;UBERON:0010532,7.60e-07,7;UBERON:0000074,7.60e-07,7;UBERON:0001229,7.60e-07,7;UBERON:0001230,7.60e-07,7;UBERON:0003220,7.60e-07,7;UBERON:0005749,7.60e-07,7;UBERON:0004199,7.60e-07,7;UBERON:0004209,7.60e-07,7;UBERON:0004198,7.60e-07,7;UBERON:0001009,8.68e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,0.447830948479849,0.971680998056939,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,3.1434978119451,0,0,0,0.522389211897802,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,5.16833518338658,6.04802646567407,6.02497102976406,19.3358072212391,9.12326526862215,22.6977713519798,1.47065232138347,0,1.60739510911344,1.34717623575702,1.0135033243499,0,0,0.366403487860815,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.85786545549578,2.80483547606892,0,0,0,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,32.3380842984805,39.3537685690119,27.3965979217821,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,2.34434894420094,0,0.102827492703324,0,0,0.672786506072164,0,0.36669142910475,0,0,0,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.286631251494,1.02943027143257,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6480060885076,4.93271745301895,3.45465465763423,20.0495428497376,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,6.45205605047762,9.39439653148147,13.0142330535289,0,0,0,0,0,0,0,5.42080263306008,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,1.479651084554,0,0,0,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0.658156191461918,0,0,1.61595542857974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,0.269604531922708,2.40773294189637,0,0,0,0,0,0,0.30607276163049,2.27471686662557,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.93978032976839,0,1.35588444468319,0,0,0.569797163602908,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0.687481272035051,2.87149209830726,1.79711100449092,2.14613024068285,3.12440040418622,1.61240333968143,0,1.16495949527454,0.0787831823072236,0,0,0,0,0,0.408610218334727,0,0,0,1.349843349309,0.77380195455795,0.364497339948148,0,1.26089131678717,0.786818822024972,0,0,0,1.42939065274673,2.64836788146173,0,0,0,0,0,0,0,0,0.439656701034247,2.65013777824443,0.129282956361551,0,0,0,4.16470909014009,3.30129040709298,1.65695622138878,1.48849806543585,0,0,0,3.26410682021684,1.7548292581589,0.919036730290385,1.63936315354902,0,0,0.244052529803926,0.3755727921195,0,0.221858103073705,0.745156835296601,0,0,28.2067358627465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.638535436228605,0,0,0.96820153449905,0.807378228159255,1.42769420259154,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.570742291745161,0,0,0.992422356778588,0,0,0,0.672567444437648,0,0,1.24183318227694,0,0,0.135939465953663,0.460409414939944,0,0,1.49136876415977,0.314231179832004,0,0,0,0,1.28657779517981,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,1.84793052341245,2.3196288626764,1.94284397223656,0,0,0,0,0,0,0.771741581079447,0,0,0,0,0.588925401344836,0,0.4226557275834,0,1.2217909337381,1.93373663920732,0,0,0,0,0,0,0.430018749454354,0,0.815897882290976,0,0,0,0,0,0,0,0,0,0,0,0,2.8795905322931,3.48353369203032,0,0.20686599172379,1.91910583710883,0.23806443146374,0.129177819672012,0.496597714366863,0,1.14564884900697,1.0105859447911,0.653150243690884,2.05339980651169,0.336760265072938,1.36272190246085,0.99798106963804,0,0,0,0,0,1.4668973301944,0,1.33151354837103,1.20764276154616,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,0.447830948479849,0.971680998056939,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,3.1434978119451,0,0,0,0.522389211897802,0.398873881556595,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,5.16833518338658,6.04802646567407,6.02497102976406,19.3358072212391,9.12326526862215,22.6977713519798,1.47065232138347,0,1.60739510911344,1.34717623575702,1.0135033243499,0,0,0.366403487860815,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.85786545549578,2.80483547606892,0,0,0,0,2.95394953340702,0,0,0,0,0,0,0,0,0,0,0,0,32.3380842984805,39.3537685690119,27.3965979217821,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,2.34434894420094,0,0.102827492703324,0,0,0.672786506072164,0,0.36669142910475,0,0,0,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.286631251494,1.02943027143257,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6480060885076,4.93271745301895,3.45465465763423,20.0495428497376,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,6.45205605047762,9.39439653148147,13.0142330535289,0,0,0,0,0,0,0,5.42080263306008,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,1.479651084554,0,0,0,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0.658156191461918,0,0,1.61595542857974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,0.269604531922708,2.40773294189637,0,0,0,0,0,0,0.30607276163049,2.27471686662557,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,1.93978032976839,0,1.35588444468319,0,0,0.569797163602908,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.558564802544508,0.687481272035051,2.87149209830726,1.79711100449092,2.14613024068285,3.12440040418622,1.61240333968143,0,1.16495949527454,0.0787831823072236,0,0,0,0,0,0.408610218334727,0,0,0,1.349843349309,0.77380195455795,0.364497339948148,0,1.26089131678717,0.786818822024972,0,0,0,1.42939065274673,2.64836788146173,0,0,0,0,0,0,0,0,0.439656701034247,2.65013777824443,0.129282956361551,0,0,0,4.16470909014009,3.30129040709298,1.65695622138878,1.48849806543585,0,0,0,3.26410682021684,1.7548292581589,0.919036730290385,1.63936315354902,0,0,0.244052529803926,0.3755727921195,0,0.221858103073705,0.745156835296601,0,0,28.2067358627465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545545977607678,0,0,0.796191777397232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642292250964595,0,0.638535436228605,0,0,0.96820153449905,0.807378228159255,1.42769420259154,0,0,0,0,0,0,0,0.752103283492572,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.570742291745161,0,0,0.992422356778588,0,0,0,0.672567444437648,0,0,1.24183318227694,0,0,0.135939465953663,0.460409414939944,0,0,1.49136876415977,0.314231179832004,0,0,0,0,1.28657779517981,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,1.84793052341245,2.3196288626764,1.94284397223656,0,0,0,0,0,0,0.771741581079447,0,0,0,0,0.588925401344836,0,0.4226557275834,0,1.2217909337381,1.93373663920732,0,0,0,0,0,0,0.430018749454354,0,0.815897882290976,0,0,0,0,0,0,0,0,0,0,0,0,2.8795905322931,3.48353369203032,0,0.20686599172379,1.91910583710883,0.23806443146374,0.129177819672012,0.496597714366863,0,1.14564884900697,1.0105859447911,0.653150243690884,2.05339980651169,0.336760265072938,1.36272190246085,0.99798106963804,0,0,0,0,0,1.4668973301944,0,1.33151354837103,1.20764276154616,0 | ||
|short_description=p2@KIF17 | |||
}} | }} |
Latest revision as of 21:25, 24 September 2015
Short description: | p2@KIF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KIF17_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000462858, uc001bdq.3_5end |
EntrezGene: | KIF17 |
HGNC: | 19167 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.51e-23 | 36 |
meso-epithelial cell | 1.39e-17 | 45 |
lymphangioblast | 1.41e-17 | 6 |
endothelial cell of lymphatic vessel | 1.41e-17 | 6 |
vascular lymphangioblast | 1.41e-17 | 6 |
endothelial cell of vascular tree | 1.17e-16 | 24 |
lining cell | 1.75e-12 | 58 |
barrier cell | 1.75e-12 | 58 |
capillary endothelial cell | 1.08e-09 | 3 |
glomerular endothelial cell | 1.24e-09 | 5 |
endothelial cell of umbilical vein | 9.49e-08 | 3 |
glomerular cell | 7.60e-07 | 7 |
kidney corpuscule cell | 7.60e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 2.13e-13 | 10 |
lymphatic vessel | 5.88e-13 | 8 |
lymph vasculature | 5.88e-13 | 8 |
lymphatic part of lymphoid system | 5.88e-13 | 8 |
adult organism | 6.14e-13 | 114 |
intraembryonic coelom | 4.09e-10 | 12 |
microcirculatory vessel | 1.08e-09 | 3 |
endothelium of capillary | 1.08e-09 | 3 |
capillary | 1.08e-09 | 3 |
mesonephric epithelium | 1.42e-08 | 8 |
mesonephric tubule | 1.42e-08 | 8 |
nephric duct | 1.42e-08 | 8 |
renal duct | 1.42e-08 | 8 |
mesonephric duct | 1.42e-08 | 8 |
pronephric duct | 1.42e-08 | 8 |
cardiac chamber | 1.49e-08 | 3 |
mesonephros | 1.43e-07 | 9 |
pronephros | 1.43e-07 | 9 |
nephrogenic cord | 1.43e-07 | 9 |
pronephric mesoderm | 1.43e-07 | 9 |
rostral part of nephrogenic cord | 1.43e-07 | 9 |
presumptive pronephric mesoderm | 1.43e-07 | 9 |
vessel | 2.12e-07 | 68 |
primitive nephron | 7.60e-07 | 7 |
renal glomerulus | 7.60e-07 | 7 |
renal corpuscle | 7.60e-07 | 7 |
glomerular capsule | 7.60e-07 | 7 |
metanephric mesenchyme | 7.60e-07 | 7 |
glomerular tuft | 7.60e-07 | 7 |
S-shaped body | 7.60e-07 | 7 |
renal vesicle | 7.60e-07 | 7 |
comma-shaped body | 7.60e-07 | 7 |
circulatory system | 8.68e-07 | 112 |