FFCP PHASE1:Hg19::chr1:190446983..190447001,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:190446983..190447001,- to FFCP PHASE1:Hg19::chr1:190446983..190447001,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=339479 | |EntrezGene=339479 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22393 | |HGNC=22393 | ||
|TSSclassifier=strong | |||
|UniProt=Q76B58 | |UniProt=Q76B58 | ||
|association_with_transcript=-224bp_to_ENST00000367462,NM_199051,uc001gse.1_5end | |||
|cluster_id=chr1:190446983..190447001,- | |||
|coexpression_cluster_id=C1254 | |||
|description=CAGE_peak_1_at_FAM5C_5end | |||
|id=chr1:190446983..190447001,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.34e-13;82!UBERON:0006215;2.62e-08;3!UBERON:0006241;4.13e-08;3!UBERON:0003057;4.13e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.45e-56!57;UBERON:0005068!1.45e-56!57;UBERON:0006241!1.45e-56!57;UBERON:0007135!1.45e-56!57;UBERON:0001017!2.67e-49!82;UBERON:0005743!1.33e-47!86;UBERON:0000073!4.15e-47!94;UBERON:0001016!4.15e-47!94;UBERON:0002616!1.50e-46!59;UBERON:0007023!1.38e-45!115;UBERON:0002780!9.34e-44!41;UBERON:0001890!9.34e-44!41;UBERON:0006240!9.34e-44!41;UBERON:0000955!1.08e-42!69;UBERON:0006238!1.08e-42!69;UBERON:0003080!2.12e-42!42;UBERON:0002020!1.26e-41!34;UBERON:0003528!1.26e-41!34;UBERON:0001893!2.75e-41!34;UBERON:0002791!6.63e-40!33;UBERON:0001869!2.45e-39!32;UBERON:0002346!2.63e-39!90;UBERON:0003075!4.57e-39!86;UBERON:0007284!4.57e-39!86;UBERON:0002619!5.84e-33!22;UBERON:0000956!1.08e-30!25;UBERON:0000203!1.08e-30!25;UBERON:0001950!2.24e-30!20;UBERON:0003056!2.02e-26!61;UBERON:0000924!2.54e-21!173;UBERON:0006601!2.54e-21!173;UBERON:0004121!1.02e-20!169;UBERON:0000153!2.51e-20!129;UBERON:0007811!2.51e-20!129;UBERON:0000033!2.04e-19!123;UBERON:0000025!1.08e-16!194;UBERON:0003076!9.65e-15!15;UBERON:0003057!9.65e-15!15;UBERON:0000064!9.55e-14!219;UBERON:0000477!1.75e-12!286;UBERON:0002308!3.16e-12!9;UBERON:0000125!3.16e-12!9;UBERON:0002420!3.67e-12!9;UBERON:0007245!3.67e-12!9;UBERON:0010009!3.67e-12!9;UBERON:0010011!3.67e-12!9;UBERON:0000454!3.67e-12!9;UBERON:0001871!4.51e-12!7;UBERON:0000481!7.38e-12!347;UBERON:0004111!3.34e-11!241;UBERON:0004733!5.96e-11!12;UBERON:0002028!5.96e-11!12;UBERON:0007277!5.96e-11!12;UBERON:0004732!6.77e-10!13;UBERON:0000200!9.29e-10!6;UBERON:0009663!1.25e-09!7;UBERON:0000483!1.50e-09!309;UBERON:0000119!2.93e-09!312;UBERON:0002021!6.16e-09!5;UBERON:0002298!1.88e-08!8;UBERON:0001872!1.98e-08!5;UBERON:0000059!3.21e-08!11;UBERON:0001155!4.04e-08!9;UBERON:0000349!4.29e-08!5;UBERON:0000062!5.13e-08!511;UBERON:0001737!1.20e-07!9;UBERON:0002680!1.50e-07!9;UBERON:0001895!1.50e-07!9;UBERON:0010092!1.50e-07!9;UBERON:0000922!6.84e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.81e-57;32!UBERON:0003528;4.67e-55;34!UBERON:0002020;4.67e-55;34!UBERON:0002791;8.81e-54;32!UBERON:0002619;5.80e-53;22!UBERON:0001893;2.33e-51;34!UBERON:0000956;7.58e-50;25!UBERON:0000203;7.58e-50;25!UBERON:0001950;1.06e-48;20!UBERON:0002780;1.28e-43;41!UBERON:0001890;1.28e-43;41!UBERON:0000073;3.56e-41;53!UBERON:0002616;3.56e-41;53!UBERON:0001017;3.84e-30;75!UBERON:0000955;3.46e-29;68!UBERON:0001016;6.16e-25;83!UBERON:0001871;1.69e-16;6!UBERON:0000125;2.70e-15;9!UBERON:0002308;2.70e-15;9!UBERON:0002420;3.56e-15;9!UBERON:0007245;3.56e-15;9!UBERON:0010009;3.56e-15;9!UBERON:0010011;3.56e-15;9!UBERON:0000454;3.56e-15;9!UBERON:0000200;6.40e-15;6!UBERON:0004733;1.30e-14;12!UBERON:0002028;1.30e-14;12!UBERON:0002021;1.30e-13;5!UBERON:0002298;1.55e-13;6!UBERON:0004732;2.43e-13;13!UBERON:0001872;8.81e-13;5!UBERON:0007023;2.06e-12;114!UBERON:0000349;3.32e-12;5!UBERON:0011216;8.72e-12;132!UBERON:0009663;3.71e-11;7!UBERON:0000369;7.61e-10;4!UBERON:0002435;7.61e-10;4!UBERON:0000204;7.61e-10;4!UBERON:0002680;2.33e-09;9!UBERON:0001895;2.33e-09;9!UBERON:0001870;2.62e-08;3!UBERON:0002240;4.13e-08;3!UBERON:0005174;4.13e-08;3!UBERON:0001137;4.13e-08;3!UBERON:0000988;7.63e-08;3!UBERON:0005383;1.30e-07;3!UBERON:0005382;1.30e-07;3!UBERON:0001896;2.32e-07;3!UBERON:0005290;2.32e-07;3!UBERON:0010314;7.51e-07;132!UBERON:0000160;7.99e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.35e-82,56;UBERON:0005068,2.35e-82,56;UBERON:0006241,2.35e-82,56;UBERON:0007135,2.35e-82,56;UBERON:0000073,1.06e-75,53;UBERON:0002616,1.06e-75,53;UBERON:0001017,4.79e-71,81;UBERON:0001016,4.61e-65,89;UBERON:0000955,1.98e-64,68;UBERON:0006238,1.98e-64,68;UBERON:0001869,4.50e-64,32;UBERON:0003528,4.80e-64,34;UBERON:0002020,4.80e-64,34;UBERON:0002780,1.06e-61,41;UBERON:0001890,1.06e-61,41;UBERON:0003080,1.06e-61,41;UBERON:0006240,1.06e-61,41;UBERON:0001893,7.55e-60,34;UBERON:0002791,1.20e-59,32;UBERON:0002619,6.44e-53,22;UBERON:0003075,3.69e-52,82;UBERON:0007284,3.69e-52,82;UBERON:0000956,7.07e-50,25;UBERON:0000203,7.07e-50,25;UBERON:0002346,4.02e-49,86;UBERON:0001950,1.12e-48,20;UBERON:0010371,1.90e-40,104;UBERON:0007023,5.12e-39,114;UBERON:0003056,2.57e-38,61;UBERON:0010314,8.20e-37,132;UBERON:0011216,9.11e-33,223;UBERON:0004121,1.44e-28,171;UBERON:0000924,1.44e-28,171;UBERON:0006601,1.44e-28,171;UBERON:0000025,1.04e-22,192;UBERON:0003076,1.04e-20,15;UBERON:0003057,1.04e-20,15;UBERON:0001871,1.52e-16,6;UBERON:0004111,4.18e-16,240;UBERON:0000125,2.48e-15,9;UBERON:0002308,2.48e-15,9;UBERON:0002420,3.08e-15,9;UBERON:0007245,3.08e-15,9;UBERON:0010009,3.08e-15,9;UBERON:0010011,3.08e-15,9;UBERON:0000454,3.08e-15,9;UBERON:0000200,6.34e-15,6;UBERON:0004733,1.14e-14,12;UBERON:0002028,1.14e-14,12;UBERON:0007277,1.14e-14,12;UBERON:0002298,1.28e-13,6;UBERON:0002021,1.38e-13,5;UBERON:0004732,2.16e-13,13;UBERON:0001872,9.25e-13,5;UBERON:0000349,3.25e-12,5;UBERON:0009663,3.32e-11,7;UBERON:0000483,5.69e-11,306;UBERON:0000119,9.96e-11,309;UBERON:0000369,6.95e-10,4;UBERON:0002435,6.95e-10,4;UBERON:0000204,6.95e-10,4;UBERON:0010082,6.95e-10,4;UBERON:0002680,2.47e-09,9;UBERON:0001895,2.47e-09,9;UBERON:0010092,2.47e-09,9;UBERON:0001870,2.72e-08,3;UBERON:0002240,3.99e-08,3;UBERON:0005174,3.99e-08,3;UBERON:0001137,3.99e-08,3;UBERON:0000923,6.02e-08,560;UBERON:0010316,6.02e-08,560;UBERON:0005291,6.02e-08,560;UBERON:0006598,6.02e-08,560;UBERON:0010317,6.02e-08,560;UBERON:0002532,6.02e-08,560;UBERON:0000988,8.28e-08,3;UBERON:0002050,9.27e-08,564;UBERON:0005383,1.23e-07,3;UBERON:0005382,1.23e-07,3;UBERON:0000922,1.35e-07,592;UBERON:0005423,1.42e-07,581;UBERON:0001896,1.77e-07,3;UBERON:0005290,1.77e-07,3;UBERON:0010096,1.77e-07,3;UBERON:0000160,8.36e-07,17 | |||
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| ||
|short_description=p1@FAM5C | |||
}} | }} |
Latest revision as of 09:15, 19 September 2015
Short description: | p1@FAM5C |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM5C_5end |
Coexpression cluster: | C1254_leiomyoblastoma_occipital_rhabdomyosarcoma_parietal_temporal_brain_medial |
Association with transcript: | -224bp_to_ENST00000367462, NM_199051, uc001gse.1_5end |
EntrezGene: | FAM5C |
HGNC: | 22393 |
UniProt: | Q76B58 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data