FFCP PHASE1:Hg19::chr1:160103687..160103724,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:160103687..160103724,+ to FFCP PHASE1:Hg19::chr1:160103687..160103724,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:160103687..160103724,+ | |||
|coexpression_cluster_id=C876 | |||
|description=CAGE_peak_at_chr1:160103687..160103724,+ | |||
|id=chr1:160103687..160103724,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.29e-17;82!UBERON:0006241;5.00e-14;3!UBERON:0003057;5.00e-14;3!UBERON:0006215;2.01e-13;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-71!115;UBERON:0001049!5.54e-71!57;UBERON:0005068!5.54e-71!57;UBERON:0006241!5.54e-71!57;UBERON:0007135!5.54e-71!57;UBERON:0001017!3.70e-62!82;UBERON:0005743!6.41e-61!86;UBERON:0002616!1.31e-58!59;UBERON:0003075!9.31e-57!86;UBERON:0007284!9.31e-57!86;UBERON:0000073!8.08e-56!94;UBERON:0001016!8.08e-56!94;UBERON:0002346!1.79e-53!90;UBERON:0002780!5.34e-52!41;UBERON:0001890!5.34e-52!41;UBERON:0006240!5.34e-52!41;UBERON:0000955!5.47e-52!69;UBERON:0006238!5.47e-52!69;UBERON:0003080!1.67e-50!42;UBERON:0001893!1.44e-43!34;UBERON:0002020!1.58e-43!34;UBERON:0003528!1.58e-43!34;UBERON:0002791!7.59e-42!33;UBERON:0001869!5.16e-40!32;UBERON:0003056!2.24e-35!61;UBERON:0004121!8.86e-32!169;UBERON:0000924!1.29e-30!173;UBERON:0006601!1.29e-30!173;UBERON:0002619!6.44e-30!22;UBERON:0000033!1.94e-29!123;UBERON:0000153!1.34e-28!129;UBERON:0007811!1.34e-28!129;UBERON:0000956!3.28e-28!25;UBERON:0000203!3.28e-28!25;UBERON:0001950!2.28e-26!20;UBERON:0003076!1.01e-20!15;UBERON:0003057!1.01e-20!15;UBERON:0000025!1.86e-18!194;UBERON:0002420!2.58e-17!9;UBERON:0007245!2.58e-17!9;UBERON:0010009!2.58e-17!9;UBERON:0010011!2.58e-17!9;UBERON:0000454!2.58e-17!9;UBERON:0002308!3.57e-17!9;UBERON:0000125!3.57e-17!9;UBERON:0004732!4.63e-17!13;UBERON:0004111!7.98e-16!241;UBERON:0004733!2.01e-15!12;UBERON:0002028!2.01e-15!12;UBERON:0007277!2.01e-15!12;UBERON:0009663!1.13e-13!7;UBERON:0000483!2.32e-13!309;UBERON:0000119!4.72e-13!312;UBERON:0000064!5.60e-13!219;UBERON:0000477!1.54e-12!286;UBERON:0002298!1.71e-12!8;UBERON:0001871!2.28e-11!7;UBERON:0000349!7.97e-11!5;UBERON:0001872!2.80e-10!5;UBERON:0002680!5.21e-10!9;UBERON:0001895!5.21e-10!9;UBERON:0010092!5.21e-10!9;UBERON:0001894!1.22e-09!7;UBERON:0006222!1.22e-09!7;UBERON:0000475!6.37e-09!365;UBERON:0000369!2.29e-08!4;UBERON:0002435!2.29e-08!4;UBERON:0000204!2.29e-08!4;UBERON:0010082!2.29e-08!4;UBERON:0000200!3.28e-08!6;UBERON:0000062!4.52e-08!511;UBERON:0001896!1.77e-07!3;UBERON:0005290!1.77e-07!3;UBERON:0010096!1.77e-07!3;UBERON:0000481!2.01e-07!347;UBERON:0002240!3.95e-07!3;UBERON:0000988!5.85e-07!3;UBERON:0006331!6.96e-07!3;UBERON:0000922!9.03e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.31e-44;53!UBERON:0002616;1.31e-44;53!UBERON:0002780;5.03e-41;41!UBERON:0001890;5.03e-41;41!UBERON:0001893;2.41e-40;34!UBERON:0003528;2.97e-37;34!UBERON:0002020;2.97e-37;34!UBERON:0001869;5.19e-37;32!UBERON:0002791;5.56e-37;32!UBERON:0002619;1.14e-33;22!UBERON:0000956;2.04e-29;25!UBERON:0000203;2.04e-29;25!UBERON:0001950;4.95e-27;20!UBERON:0001017;1.70e-26;75!UBERON:0004732;6.18e-26;13!UBERON:0001016;2.23e-25;83!UBERON:0000955;5.80e-23;68!UBERON:0002420;1.09e-22;9!UBERON:0007245;1.09e-22;9!UBERON:0010009;1.09e-22;9!UBERON:0010011;1.09e-22;9!UBERON:0000454;1.09e-22;9!UBERON:0004733;1.68e-22;12!UBERON:0002028;1.68e-22;12!UBERON:0000349;4.80e-22;5!UBERON:0002298;6.56e-19;6!UBERON:0000125;7.31e-17;9!UBERON:0002308;7.31e-17;9!UBERON:0007023;7.53e-17;114!UBERON:0009663;3.66e-15;7!UBERON:0001896;1.05e-14;3!UBERON:0005290;1.05e-14;3!UBERON:0002240;5.00e-14;3!UBERON:0005174;5.00e-14;3!UBERON:0001137;5.00e-14;3!UBERON:0001872;8.57e-14;5!UBERON:0002680;8.00e-12;9!UBERON:0001895;8.00e-12;9!UBERON:0001871;2.74e-10;6!UBERON:0001876;7.21e-10;2!UBERON:0001954;8.60e-10;2!UBERON:0003022;8.60e-10;2!UBERON:0002421;8.60e-10;2!UBERON:0002600;8.60e-10;2!UBERON:0001875;1.25e-09;2!UBERON:0005162;1.25e-09;2!UBERON:0000122;1.25e-09;2!UBERON:0006514;1.25e-09;2!UBERON:0010314;1.66e-09;132!UBERON:0011216;2.20e-09;132!UBERON:0000200;5.20e-07;6!UBERON:0002037;6.21e-07;6!UBERON:0000988;8.61e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.30e-86,56;UBERON:0005068,3.30e-86,56;UBERON:0006241,3.30e-86,56;UBERON:0007135,3.30e-86,56;UBERON:0000073,1.92e-75,53;UBERON:0002616,1.92e-75,53;UBERON:0001017,1.00e-71,81;UBERON:0003075,1.07e-67,82;UBERON:0007284,1.07e-67,82;UBERON:0001016,1.85e-67,89;UBERON:0002346,3.29e-64,86;UBERON:0000955,2.06e-60,68;UBERON:0006238,2.06e-60,68;UBERON:0007023,5.43e-56,114;UBERON:0002780,1.49e-53,41;UBERON:0001890,1.49e-53,41;UBERON:0003080,1.49e-53,41;UBERON:0006240,1.49e-53,41;UBERON:0010371,8.50e-52,104;UBERON:0001893,1.12e-49,34;UBERON:0003528,4.78e-45,34;UBERON:0002020,4.78e-45,34;UBERON:0002791,5.46e-43,32;UBERON:0001869,5.60e-43,32;UBERON:0010314,1.13e-41,132;UBERON:0003056,1.11e-40,61;UBERON:0004121,1.33e-35,171;UBERON:0000924,1.33e-35,171;UBERON:0006601,1.33e-35,171;UBERON:0002619,6.81e-34,22;UBERON:0003076,9.12e-34,15;UBERON:0003057,9.12e-34,15;UBERON:0000956,1.30e-29,25;UBERON:0000203,1.30e-29,25;UBERON:0001950,3.25e-27,20;UBERON:0004732,4.64e-26,13;UBERON:0011216,7.75e-24,223;UBERON:0002420,4.93e-23,9;UBERON:0007245,4.93e-23,9;UBERON:0010009,4.93e-23,9;UBERON:0010011,4.93e-23,9;UBERON:0000454,4.93e-23,9;UBERON:0004733,1.22e-22,12;UBERON:0002028,1.22e-22,12;UBERON:0007277,1.22e-22,12;UBERON:0000349,3.34e-22,5;UBERON:0000025,2.03e-21,192;UBERON:0002298,3.40e-19,6;UBERON:0000125,3.57e-17,9;UBERON:0002308,3.57e-17,9;UBERON:0004111,1.08e-16,240;UBERON:0009663,1.86e-15,7;UBERON:0001896,9.44e-15,3;UBERON:0005290,9.44e-15,3;UBERON:0010096,9.44e-15,3;UBERON:0000483,2.85e-14,306;UBERON:0001872,4.08e-14,5;UBERON:0000119,4.74e-14,309;UBERON:0002240,5.61e-14,3;UBERON:0005174,5.61e-14,3;UBERON:0001137,5.61e-14,3;UBERON:0002680,6.52e-12,9;UBERON:0001895,6.52e-12,9;UBERON:0010092,6.52e-12,9;UBERON:0001871,2.68e-10,6;UBERON:0001876,6.77e-10,2;UBERON:0001954,7.73e-10,2;UBERON:0003022,7.73e-10,2;UBERON:0002421,7.73e-10,2;UBERON:0002600,7.73e-10,2;UBERON:0001875,9.21e-10,2;UBERON:0006514,9.21e-10,2;UBERON:0005162,1.31e-09,2;UBERON:0000122,1.31e-09,2;UBERON:0000923,4.95e-08,560;UBERON:0010316,4.95e-08,560;UBERON:0005291,4.95e-08,560;UBERON:0006598,4.95e-08,560;UBERON:0010317,4.95e-08,560;UBERON:0002532,4.95e-08,560;UBERON:0002050,6.57e-08,564;UBERON:0005423,2.10e-07,581;UBERON:0000922,4.30e-07,592;UBERON:0000200,4.32e-07,6;UBERON:0000988,5.49e-07,3;UBERON:0002037,7.12e-07,6;UBERON:0006215,7.12e-07,6 | |||
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|short_description=p@chr1:160103687..160103724,+ | |||
}} | }} |
Latest revision as of 23:14, 27 July 2015
Short description: | p@chr1:160103687..160103724, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:160103687..160103724, + |
Coexpression cluster: | C876_skeletal_spinal_medulla_hippocampus_parietal_thalamus_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data