FFCP PHASE1:Hg19::chr1:156611900..156611916,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:156611900..156611916,+ to FFCP PHASE1:Hg19::chr1:156611900..156611916,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=63827 | |EntrezGene=63827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23059 | |HGNC=23059 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T3I6 | |UniProt=Q5T3I6 | ||
|association_with_transcript=-5bp_to_ENST00000424639_5end | |||
|cluster_id=chr1:156611900..156611916,+ | |||
|coexpression_cluster_id=C1816 | |||
|description=CAGE_peak_1_at_BCAN_5end | |||
|id=chr1:156611900..156611916,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.12e-13!10;CL:0000541!2.12e-13!10;CL:0000047!1.43e-10!8;CL:0000147!8.99e-09!14;CL:0000540!6.25e-08!6;CL:0000031!6.25e-08!6;CL:0000404!6.25e-08!6;CL:0000133!5.55e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000148;2.75e-18;10!CL:0000147;2.23e-12;14!CL:0000540;1.54e-10;6!CL:0000404;1.54e-10;6!CL:0002322;1.47e-08;5!CL:0000710;5.54e-08;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.81e-18,10;CL:0000541,2.81e-18,10;CL:0000047,2.77e-14,8;CL:0000147,2.26e-12,14;CL:0000540,1.47e-10,6;CL:0000031,1.47e-10,6;CL:0000404,1.47e-10,6;CL:0002322,1.52e-08,5;CL:0000133,3.06e-08,59;CL:0000710,5.59e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.24e-19;82!CL:0000031;1.54e-10;6!UBERON:0006241;4.20e-07;3!UBERON:0003057;4.20e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.77e-65!82;UBERON:0005743!4.14e-63!86;UBERON:0001049!1.18e-62!57;UBERON:0005068!1.18e-62!57;UBERON:0006241!1.18e-62!57;UBERON:0007135!1.18e-62!57;UBERON:0000073!6.18e-61!94;UBERON:0001016!6.18e-61!94;UBERON:0002616!5.63e-54!59;UBERON:0000955!2.35e-49!69;UBERON:0006238!2.35e-49!69;UBERON:0002780!1.08e-48!41;UBERON:0001890!1.08e-48!41;UBERON:0006240!1.08e-48!41;UBERON:0007023!1.24e-48!115;UBERON:0003080!3.36e-47!42;UBERON:0003075!5.38e-46!86;UBERON:0007284!5.38e-46!86;UBERON:0002346!5.14e-43!90;UBERON:0001893!7.26e-43!34;UBERON:0002020!1.29e-42!34;UBERON:0003528!1.29e-42!34;UBERON:0002791!1.29e-41!33;UBERON:0001869!4.65e-40!32;UBERON:0004121!1.81e-33!169;UBERON:0003056!1.19e-32!61;UBERON:0000924!4.18e-32!173;UBERON:0006601!4.18e-32!173;UBERON:0002619!6.04e-31!22;UBERON:0000956!6.18e-31!25;UBERON:0000203!6.18e-31!25;UBERON:0001950!3.24e-28!20;UBERON:0000033!5.28e-27!123;UBERON:0000153!8.83e-26!129;UBERON:0007811!8.83e-26!129;UBERON:0003076!6.44e-16!15;UBERON:0003057!6.44e-16!15;UBERON:0004732!1.80e-13!13;UBERON:0002420!3.12e-13!9;UBERON:0007245!3.12e-13!9;UBERON:0010009!3.12e-13!9;UBERON:0010011!3.12e-13!9;UBERON:0000454!3.12e-13!9;UBERON:0002308!5.55e-13!9;UBERON:0000125!5.55e-13!9;UBERON:0004733!3.71e-12!12;UBERON:0002028!3.71e-12!12;UBERON:0007277!3.71e-12!12;UBERON:0001871!1.29e-11!7;UBERON:0000025!6.24e-11!194;UBERON:0009663!1.30e-10!7;UBERON:0000200!6.56e-09!6;UBERON:0002680!1.07e-08!9;UBERON:0001895!1.07e-08!9;UBERON:0010092!1.07e-08!9;UBERON:0000922!1.42e-08!612;UBERON:0002298!1.51e-08!8;UBERON:0000349!2.68e-08!5;UBERON:0004111!3.27e-08!241;UBERON:0002021!4.19e-08!5;UBERON:0001872!5.49e-08!5;UBERON:0001894!2.84e-07!7;UBERON:0006222!2.84e-07!7;UBERON:0000064!3.60e-07!219;UBERON:0000369!7.85e-07!4;UBERON:0002435!7.85e-07!4;UBERON:0000204!7.85e-07!4;UBERON:0010082!7.85e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.67e-48;34!UBERON:0003528;5.37e-48;34!UBERON:0002020;5.37e-48;34!UBERON:0002791;8.10e-48;32!UBERON:0001869;1.08e-47;32!UBERON:0002780;5.74e-47;41!UBERON:0001890;5.74e-47;41!UBERON:0002619;3.49e-43;22!UBERON:0000073;7.75e-43;53!UBERON:0002616;7.75e-43;53!UBERON:0000956;2.09e-40;25!UBERON:0000203;2.09e-40;25!UBERON:0001950;2.69e-39;20!UBERON:0001017;1.47e-29;75!UBERON:0000955;1.19e-28;68!UBERON:0001016;9.25e-27;83!UBERON:0002420;4.97e-18;9!UBERON:0007245;4.97e-18;9!UBERON:0010009;4.97e-18;9!UBERON:0010011;4.97e-18;9!UBERON:0000454;4.97e-18;9!UBERON:0000125;1.13e-17;9!UBERON:0002308;1.13e-17;9!UBERON:0009663;2.48e-14;7!UBERON:0001871;4.11e-14;6!UBERON:0004732;1.30e-13;13!UBERON:0007023;1.48e-13;114!UBERON:0011216;1.80e-12;132!UBERON:0000200;6.07e-12;6!UBERON:0004733;6.98e-12;12!UBERON:0002028;6.98e-12;12!UBERON:0002298;1.19e-11;6!UBERON:0000349;4.29e-11;5!UBERON:0002021;8.54e-11;5!UBERON:0001872;1.25e-10;5!UBERON:0001894;8.31e-10;7!UBERON:0000369;5.33e-09;4!UBERON:0002435;5.33e-09;4!UBERON:0000204;5.33e-09;4!UBERON:0000922;1.74e-08;49!UBERON:0002784;2.00e-08;4!UBERON:0002680;2.15e-07;9!UBERON:0001895;2.15e-07;9!UBERON:0002240;4.20e-07;3!UBERON:0005174;4.20e-07;3!UBERON:0001137;4.20e-07;3!UBERON:0005383;4.33e-07;3!UBERON:0005382;4.33e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.52e-86,81;UBERON:0001016,8.81e-84,89;UBERON:0001049,4.70e-82,56;UBERON:0005068,4.70e-82,56;UBERON:0006241,4.70e-82,56;UBERON:0007135,4.70e-82,56;UBERON:0000073,2.81e-76,53;UBERON:0002616,2.81e-76,53;UBERON:0002780,9.14e-66,41;UBERON:0001890,9.14e-66,41;UBERON:0003080,9.14e-66,41;UBERON:0006240,9.14e-66,41;UBERON:0000955,4.73e-64,68;UBERON:0006238,4.73e-64,68;UBERON:0001893,3.26e-57,34;UBERON:0003528,7.20e-57,34;UBERON:0002020,7.20e-57,34;UBERON:0003075,4.31e-56,82;UBERON:0007284,4.31e-56,82;UBERON:0002791,2.29e-53,32;UBERON:0001869,2.97e-53,32;UBERON:0002346,9.52e-53,86;UBERON:0010371,3.10e-46,104;UBERON:0007023,5.10e-46,114;UBERON:0003056,2.47e-45,61;UBERON:0004121,2.37e-43,171;UBERON:0000924,2.37e-43,171;UBERON:0006601,2.37e-43,171;UBERON:0002619,3.90e-43,22;UBERON:0000956,2.23e-40,25;UBERON:0000203,2.23e-40,25;UBERON:0001950,2.89e-39,20;UBERON:0011216,3.32e-34,223;UBERON:0010314,1.08e-31,132;UBERON:0002420,4.82e-18,9;UBERON:0007245,4.82e-18,9;UBERON:0010009,4.82e-18,9;UBERON:0010011,4.82e-18,9;UBERON:0000454,4.82e-18,9;UBERON:0000125,1.09e-17,9;UBERON:0002308,1.09e-17,9;UBERON:0003076,6.38e-17,15;UBERON:0003057,6.38e-17,15;UBERON:0000025,4.71e-15,192;UBERON:0009663,2.43e-14,7;UBERON:0001871,4.49e-14,6;UBERON:0004732,1.25e-13,13;UBERON:0000200,6.13e-12,6;UBERON:0004733,6.74e-12,12;UBERON:0002028,6.74e-12,12;UBERON:0007277,6.74e-12,12;UBERON:0002298,1.16e-11,6;UBERON:0004111,4.03e-11,240;UBERON:0000349,4.47e-11,5;UBERON:0002021,8.38e-11,5;UBERON:0001872,1.23e-10,5;UBERON:0001894,7.92e-10,7;UBERON:0006222,7.92e-10,7;UBERON:0000369,5.17e-09,4;UBERON:0002435,5.17e-09,4;UBERON:0000204,5.17e-09,4;UBERON:0010082,5.17e-09,4;UBERON:0002784,2.04e-08,4;UBERON:0000922,4.78e-08,592;UBERON:0002680,2.10e-07,9;UBERON:0001895,2.10e-07,9;UBERON:0010092,2.10e-07,9;UBERON:0005383,4.16e-07,3;UBERON:0005382,4.16e-07,3;UBERON:0002240,4.33e-07,3;UBERON:0005174,4.33e-07,3;UBERON:0001137,4.33e-07,3;UBERON:0000483,8.68e-07,306 | |||
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| ||
|short_description=p1@BCAN | |||
}} | }} |
Latest revision as of 16:50, 17 September 2015
Short description: | p1@BCAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BCAN_5end |
Coexpression cluster: | C1816_spinal_Melanocyte_brain_hippocampus_amygdala_corpus_temporal |
Association with transcript: | -5bp_to_ENST00000424639_5end |
EntrezGene: | BCAN |
HGNC: | 23059 |
UniProt: | Q5T3I6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.81e-18 | 10 |
melanoblast | 2.81e-18 | 10 |
neuronal stem cell | 2.77e-14 | 8 |
pigment cell | 2.26e-12 | 14 |
neuron | 1.47e-10 | 6 |
neuroblast | 1.47e-10 | 6 |
electrically signaling cell | 1.47e-10 | 6 |
embryonic stem cell | 1.52e-08 | 5 |
neurectodermal cell | 3.06e-08 | 59 |
neurecto-epithelial cell | 5.59e-08 | 20 |