FFCP PHASE1:Hg19::chr1:111770265..111770275,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:111770265..111770275,+ to FFCP PHASE1:Hg19::chr1:111770265..111770275,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1117 | |EntrezGene=1117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1933 | |HGNC=1933 | ||
|TSSclassifier=strong | |||
|UniProt=Q15782,A6NNY3 | |UniProt=Q15782,A6NNY3 | ||
|association_with_transcript=-5bp_to_ENST00000369748,NM_001025197,NM_004000,uc001eam.2,uc001ean.2_5end | |||
|cluster_id=chr1:111770265..111770275,+ | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_10_at_CHI3L2_5end | |||
|id=chr1:111770265..111770275,+ | |||
|ontology_enrichment_celltype=CL:0000153!9.08e-09!9;CL:0000447!9.08e-09!9;CL:0000667!1.59e-07!6;CL:0000058!1.59e-07!6;CL:0000138!1.59e-07!6;CL:0000136!3.34e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000138;3.26e-28;6!CL:0002521;1.65e-20;3!CL:0000153;8.96e-19;9!CL:0000447;8.96e-19;9!CL:0000136;7.05e-18;13!CL:0002602;2.28e-14;2!CL:0000327;3.41e-11;15!CL:0002540;1.18e-10;6!CL:0002564;5.01e-10;3!CL:0002615;1.12e-09;3!CL:0000499;2.81e-08;28!CL:0002591;7.09e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,3.87e-28,6;CL:0000138,3.87e-28,6;CL:0002521,5.81e-21,3;CL:0000153,1.00e-18,9;CL:0000447,1.00e-18,9;CL:0000136,1.60e-15,15;CL:0002602,1.57e-14,2;CL:0000327,3.65e-11,15;CL:0002540,1.14e-10,6;CL:0002564,7.18e-10,3;CL:0002615,1.66e-09,3;CL:0000499,2.89e-08,28;CL:0002591,9.94e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.35e-08;1!UBERON:0006298;7.09e-08;1!UBERON:0010115;7.09e-08;1!UBERON:0005425;7.09e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;2.35e-08;1!DOID:0050177;2.35e-08;1!DOID:0050427;2.35e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.52e-08,1;DOID:0050177,2.52e-08,1;DOID:0050427,2.52e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.70e-19!115;UBERON:0003408!5.67e-11!10;UBERON:0001044!3.14e-10!6;UBERON:0003293!3.14e-10!6;UBERON:0003294!3.14e-10!6;UBERON:0010047!3.14e-10!6;UBERON:0000167!3.14e-10!6;UBERON:0001049!4.80e-09!57;UBERON:0005068!4.80e-09!57;UBERON:0006241!4.80e-09!57;UBERON:0007135!4.80e-09!57;UBERON:0003075!8.36e-08!86;UBERON:0007284!8.36e-08!86;UBERON:0002780!1.07e-07!41;UBERON:0001890!1.07e-07!41;UBERON:0006240!1.07e-07!41;UBERON:0002616!1.33e-07!59;UBERON:0003080!2.11e-07!42;UBERON:0000153!3.36e-07!129;UBERON:0007811!3.36e-07!129;UBERON:0002346!4.08e-07!90;UBERON:0000955!6.65e-07!69;UBERON:0006238!6.65e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;8.68e-22;5!UBERON:0002216;8.68e-22;5!UBERON:0011134;8.68e-22;5!UBERON:0002209;8.68e-22;5!UBERON:0002213;8.68e-22;5!UBERON:0007844;8.68e-22;5!UBERON:0011138;8.68e-22;5!UBERON:0001130;8.68e-22;5!UBERON:0001066;8.68e-22;5!UBERON:0001468;8.68e-22;5!UBERON:0002190;1.65e-20;3!UBERON:0001044;1.51e-18;6!UBERON:0003293;1.51e-18;6!UBERON:0003294;1.51e-18;6!UBERON:0010047;1.51e-18;6!UBERON:0003408;1.51e-18;6!UBERON:0000167;1.51e-18;6!UBERON:0001829;1.57e-14;2!UBERON:0006444;2.28e-14;2!UBERON:0001995;2.28e-14;2!UBERON:0004715;2.28e-14;2!UBERON:0004905;1.07e-13;8!UBERON:0000982;1.07e-13;8!UBERON:0004770;1.07e-13;8!UBERON:0002072;1.54e-12;5!UBERON:0004765;7.50e-12;26!UBERON:0002242;5.01e-10;3!UBERON:0002418;7.01e-10;3!UBERON:0004755;7.01e-10;3!UBERON:0001831;2.35e-08;1!UBERON:0001567;2.35e-08;1!UBERON:0001041;5.02e-08;14!UBERON:0002363;7.09e-08;1!UBERON:0001736;7.09e-08;1!UBERON:0002135;7.09e-08;1!UBERON:0000941;7.09e-08;1!UBERON:0001785;7.09e-08;1!UBERON:0002464;7.09e-08;1!UBERON:0004904;7.09e-08;1!UBERON:0001021;7.09e-08;1!UBERON:0000075;6.60e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,9.96e-22,5;UBERON:0002216,9.96e-22,5;UBERON:0011134,9.96e-22,5;UBERON:0002209,9.96e-22,5;UBERON:0002213,9.96e-22,5;UBERON:0005856,9.96e-22,5;UBERON:0005866,9.96e-22,5;UBERON:0005863,9.96e-22,5;UBERON:0007844,9.96e-22,5;UBERON:0011138,9.96e-22,5;UBERON:0001130,9.96e-22,5;UBERON:0001066,9.96e-22,5;UBERON:0001468,9.96e-22,5;UBERON:0002190,5.81e-21,3;UBERON:0001044,1.70e-18,6;UBERON:0003293,1.70e-18,6;UBERON:0003294,1.70e-18,6;UBERON:0010047,1.70e-18,6;UBERON:0000167,1.70e-18,6;UBERON:0006444,1.57e-14,2;UBERON:0001995,1.57e-14,2;UBERON:0004715,1.57e-14,2;UBERON:0001829,1.68e-14,2;UBERON:0004905,1.16e-13,8;UBERON:0000982,1.16e-13,8;UBERON:0004770,1.16e-13,8;UBERON:0002072,8.33e-13,5;UBERON:0003408,3.64e-11,10;UBERON:0002418,5.49e-10,3;UBERON:0004755,5.49e-10,3;UBERON:0002242,7.18e-10,3;UBERON:0003068,7.18e-10,3;UBERON:0002328,7.18e-10,3;UBERON:0004880,7.18e-10,3;UBERON:0001831,2.35e-08,1;UBERON:0001567,2.35e-08,1;UBERON:0008801,2.35e-08,1;UBERON:0002363,5.05e-08,1;UBERON:0007645,5.05e-08,1;UBERON:0007647,5.05e-08,1;UBERON:0010115,5.05e-08,1;UBERON:0000941,6.63e-08,1;UBERON:0001785,6.63e-08,1;UBERON:0002464,6.63e-08,1;UBERON:0004904,6.63e-08,1;UBERON:0001021,6.63e-08,1;UBERON:0003902,6.63e-08,1;UBERON:0005425,6.63e-08,1;UBERON:0002135,7.10e-08,1;UBERON:0001736,7.59e-08,1;UBERON:0006298,7.59e-08,1;UBERON:0000075,6.87e-07,16 | |||
|phase1_expression=0.181678379270557,2.5692062866918,0.281908808191942,1.0007329835313,1.34088328328186,0,2.53299878168311,1.89515962028049,1.82829939739887,0,0,0,0,2.10402800032079,1.65698687863958,0,0,0,0,0,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0.755751887377619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0.336985893439485,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,1.44575660953827,1.00267582127178,3.47631645505977,3.9764297352555,50.1233916411715,0,0,0,0.130979075497713,0,0,0.324547393654683,0.522389211897802,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0.323292113637624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,5.76650011079957,1.00034104211935,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.633322905892992,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337005664903385,0,0.234264445725339,0,0,0.242780379534093,0,0,0,1.64285107034069,0,0,0,0,0,0,0,0.832048038078832,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0.137041924646751,0,0.126621591911757,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,1.39641200636127,0.458320848023367,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0.573409195690071,0.776503360757966,0.993542447062135,0,0,0,0,0,0,0,0,0,0,1.51522404220071,1.25783950876288,6.22867855117575,0,0.453692771289717,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,1.25362188757041,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0.620060389503552,0.0634158101939068,0,4.38606213485746,0,0,0,0,0.336283722218824,0,0,0.266107110487916,0.115233987555779,0,0.0679697329768317,0.131545547125698,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0.414432328326074,0.85359238546975,2.07377898544228,7.31386509994472,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.785233868459781,0,0,0,0,0.0644578879735772,0.299823467774787,0,0,0,0,1.37618785021362,0.286679166302903,0,0.0679914901909147,0,0,0,4.62175628631418,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.20686599172379,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.509177266225319,0,0.435433495793923,0,0,0.645499848534087,0,0,0,0,0,0,0,0,0,0.201273793591026,4.16739039994203 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|short_description=p10@CHI3L2 | |||
}} | }} |
Latest revision as of 02:58, 16 September 2015
Short description: | p10@CHI3L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CHI3L2_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | -5bp_to_ENST00000369748, NM_001025197, NM_004000, uc001eam.2, uc001ean.2_5end |
EntrezGene: | CHI3L2 |
HGNC: | 1933 |
UniProt: | Q15782A6NNY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 3.87e-28 | 6 |
chondrocyte | 3.87e-28 | 6 |
subcutaneous fat cell | 5.81e-21 | 3 |
GAG secreting cell | 1.00e-18 | 9 |
carbohydrate secreting cell | 1.00e-18 | 9 |
fat cell | 1.60e-15 | 15 |
annulus pulposus cell | 1.57e-14 | 2 |
extracellular matrix secreting cell | 3.65e-11 | 15 |
mesenchymal stem cell of the bone marrow | 1.14e-10 | 6 |
nucleus pulposus cell of intervertebral disc | 7.18e-10 | 3 |
adipocyte of omentum tissue | 1.66e-09 | 3 |
stromal cell | 2.89e-08 | 28 |
smooth muscle cell of the pulmonary artery | 9.94e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.52e-08 | 1 |
monogenic disease | 2.52e-08 | 1 |
xeroderma pigmentosum | 2.52e-08 | 1 |