FFCP PHASE1:Hg19::chr1:102462722..102462780,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:102462722..102462780,- to FFCP PHASE1:Hg19::chr1:102462722..102462780,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=118427 | |EntrezGene=118427 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17990 | |HGNC=17990 | ||
|TSSclassifier=strong | |||
|UniProt=B3KTG9,Q5T3V6,Q96PB7 | |UniProt=B3KTG9,Q5T3V6,Q96PB7 | ||
|association_with_transcript=9bp_to_NM_058170,uc001dug.2,uc001duh.2,uc001dui.2,uc001duj.2_5end | |||
|cluster_id=chr1:102462722..102462780,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_4_at_OLFM3_5end | |||
|id=chr1:102462722..102462780,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.62e-18;82!UBERON:0006215;5.98e-13;3!UBERON:0010122;4.67e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.17e-82!57;UBERON:0005068!3.17e-82!57;UBERON:0006241!3.17e-82!57;UBERON:0007135!3.17e-82!57;UBERON:0001017!3.63e-73!82;UBERON:0005743!8.72e-72!86;UBERON:0000073!2.91e-71!94;UBERON:0001016!2.91e-71!94;UBERON:0002616!5.19e-69!59;UBERON:0000955!5.47e-65!69;UBERON:0006238!5.47e-65!69;UBERON:0002346!3.49e-63!90;UBERON:0003075!1.16e-61!86;UBERON:0007284!1.16e-61!86;UBERON:0002780!1.52e-61!41;UBERON:0001890!1.52e-61!41;UBERON:0006240!1.52e-61!41;UBERON:0003080!7.66e-60!42;UBERON:0001869!3.04e-56!32;UBERON:0002020!4.79e-56!34;UBERON:0003528!4.79e-56!34;UBERON:0001893!7.50e-56!34;UBERON:0002791!1.17e-53!33;UBERON:0002619!4.96e-49!22;UBERON:0001950!3.17e-45!20;UBERON:0003056!1.54e-42!61;UBERON:0000956!1.68e-42!25;UBERON:0000203!1.68e-42!25;UBERON:0000924!2.14e-41!173;UBERON:0006601!2.14e-41!173;UBERON:0004121!1.09e-39!169;UBERON:0007023!2.61e-37!115;UBERON:0000033!3.35e-35!123;UBERON:0000153!6.92e-33!129;UBERON:0007811!6.92e-33!129;UBERON:0003076!2.41e-22!15;UBERON:0003057!2.41e-22!15;UBERON:0000025!9.28e-19!194;UBERON:0001871!9.42e-18!7;UBERON:0004733!3.75e-17!12;UBERON:0002028!3.75e-17!12;UBERON:0007277!3.75e-17!12;UBERON:0004732!1.20e-15!13;UBERON:0002420!1.03e-14!9;UBERON:0007245!1.03e-14!9;UBERON:0010009!1.03e-14!9;UBERON:0010011!1.03e-14!9;UBERON:0000454!1.03e-14!9;UBERON:0002308!1.07e-14!9;UBERON:0000125!1.07e-14!9;UBERON:0000200!1.31e-14!6;UBERON:0004111!2.49e-12!241;UBERON:0002021!2.94e-12!5;UBERON:0002680!4.14e-12!9;UBERON:0001895!4.14e-12!9;UBERON:0010092!4.14e-12!9;UBERON:0001872!9.36e-12!5;UBERON:0000349!2.50e-11!5;UBERON:0000064!4.02e-11!219;UBERON:0009663!5.95e-11!7;UBERON:0000483!1.25e-10!309;UBERON:0000119!2.20e-10!312;UBERON:0000369!1.63e-09!4;UBERON:0002435!1.63e-09!4;UBERON:0000204!1.63e-09!4;UBERON:0010082!1.63e-09!4;UBERON:0000477!1.92e-09!286;UBERON:0002298!2.08e-09!8;UBERON:0002771!4.71e-08!3;UBERON:0000475!8.20e-08!365;UBERON:0000988!1.11e-07!3;UBERON:0001894!1.82e-07!7;UBERON:0006222!1.82e-07!7;UBERON:0005383!2.01e-07!3;UBERON:0005382!2.01e-07!3;UBERON:0002240!6.47e-07!3;UBERON:0001896!8.13e-07!3;UBERON:0005290!8.13e-07!3;UBERON:0010096!8.13e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;8.87e-74;20!UBERON:0002619;1.13e-73;22!UBERON:0001869;3.71e-73;32!UBERON:0003528;1.41e-71;34!UBERON:0002020;1.41e-71;34!UBERON:0002791;3.33e-68;32!UBERON:0001893;3.76e-66;34!UBERON:0000956;1.71e-64;25!UBERON:0000203;1.71e-64;25!UBERON:0002780;3.08e-53;41!UBERON:0001890;3.08e-53;41!UBERON:0000073;2.62e-46;53!UBERON:0002616;2.62e-46;53!UBERON:0000955;4.30e-38;68!UBERON:0001017;1.47e-35;75!UBERON:0001016;2.13e-31;83!UBERON:0001871;7.53e-25;6!UBERON:0000200;4.37e-23;6!UBERON:0002021;2.87e-19;5!UBERON:0000125;1.91e-18;9!UBERON:0002308;1.91e-18;9!UBERON:0002420;1.99e-18;9!UBERON:0007245;1.99e-18;9!UBERON:0010009;1.99e-18;9!UBERON:0010011;1.99e-18;9!UBERON:0000454;1.99e-18;9!UBERON:0001872;2.97e-18;5!UBERON:0002680;4.90e-15;9!UBERON:0001895;4.90e-15;9!UBERON:0000369;1.14e-14;4!UBERON:0002435;1.14e-14;4!UBERON:0000204;1.14e-14;4!UBERON:0004733;1.22e-14;12!UBERON:0002028;1.22e-14;12!UBERON:0004732;1.97e-13;13!UBERON:0007023;8.36e-13;114!UBERON:0001870;1.62e-12;3!UBERON:0009663;1.63e-12;7!UBERON:0011216;3.25e-12;132!UBERON:0000349;6.03e-12;5!UBERON:0000988;1.01e-11;3!UBERON:0005383;2.99e-11;3!UBERON:0005382;2.99e-11;3!UBERON:0002298;8.22e-10;6!UBERON:0002702;7.71e-09;2!UBERON:0002771;8.01e-09;2!UBERON:0002148;4.42e-08;2!UBERON:0006331;4.42e-08;2!UBERON:0009662;4.42e-08;2!UBERON:0001876;4.67e-08;2!UBERON:0001873;4.67e-08;2!UBERON:0010314;1.23e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.22e-91,53;UBERON:0002616,7.22e-91,53;UBERON:0001049,2.47e-90,56;UBERON:0005068,2.47e-90,56;UBERON:0006241,2.47e-90,56;UBERON:0007135,2.47e-90,56;UBERON:0003528,6.58e-82,34;UBERON:0002020,6.58e-82,34;UBERON:0001869,1.19e-81,32;UBERON:0000955,3.14e-80,68;UBERON:0006238,3.14e-80,68;UBERON:0002780,2.28e-77,41;UBERON:0001890,2.28e-77,41;UBERON:0003080,2.28e-77,41;UBERON:0006240,2.28e-77,41;UBERON:0001017,7.24e-77,81;UBERON:0001893,1.45e-76,34;UBERON:0002791,1.81e-75,32;UBERON:0001016,2.79e-75,89;UBERON:0001950,5.54e-74,20;UBERON:0002619,8.80e-74,22;UBERON:0000956,1.36e-64,25;UBERON:0000203,1.36e-64,25;UBERON:0003075,3.02e-62,82;UBERON:0007284,3.02e-62,82;UBERON:0002346,3.55e-62,86;UBERON:0003056,3.64e-53,61;UBERON:0010371,6.33e-50,104;UBERON:0004121,1.41e-40,171;UBERON:0000924,1.41e-40,171;UBERON:0006601,1.41e-40,171;UBERON:0010314,1.76e-39,132;UBERON:0007023,3.00e-38,114;UBERON:0011216,1.15e-28,223;UBERON:0001871,6.19e-25,6;UBERON:0000200,4.06e-23,6;UBERON:0000025,2.37e-21,192;UBERON:0002021,3.16e-19,5;UBERON:0002420,1.97e-18,9;UBERON:0007245,1.97e-18,9;UBERON:0010009,1.97e-18,9;UBERON:0010011,1.97e-18,9;UBERON:0000454,1.97e-18,9;UBERON:0000125,2.08e-18,9;UBERON:0002308,2.08e-18,9;UBERON:0001872,2.15e-18,5;UBERON:0004111,3.25e-15,240;UBERON:0002680,5.28e-15,9;UBERON:0001895,5.28e-15,9;UBERON:0010092,5.28e-15,9;UBERON:0003076,9.50e-15,15;UBERON:0003057,9.50e-15,15;UBERON:0000369,1.08e-14,4;UBERON:0002435,1.08e-14,4;UBERON:0000204,1.08e-14,4;UBERON:0010082,1.08e-14,4;UBERON:0004733,1.39e-14,12;UBERON:0002028,1.39e-14,12;UBERON:0007277,1.39e-14,12;UBERON:0004732,2.22e-13,13;UBERON:0009663,1.65e-12,7;UBERON:0001870,1.69e-12,3;UBERON:0000483,2.23e-12,306;UBERON:0000119,3.66e-12,309;UBERON:0000349,6.58e-12,5;UBERON:0000988,1.13e-11,3;UBERON:0005383,3.00e-11,3;UBERON:0005382,3.00e-11,3;UBERON:0002298,9.48e-10,6;UBERON:0002771,7.02e-09,2;UBERON:0002702,8.18e-09,2;UBERON:0001876,4.51e-08,2;UBERON:0002148,4.84e-08,2;UBERON:0006331,4.84e-08,2;UBERON:0009662,4.84e-08,2;UBERON:0000923,6.04e-08,560;UBERON:0010316,6.04e-08,560;UBERON:0005291,6.04e-08,560;UBERON:0006598,6.04e-08,560;UBERON:0010317,6.04e-08,560;UBERON:0002532,6.04e-08,560;UBERON:0001873,6.23e-08,2;UBERON:0010122,6.23e-08,2;UBERON:0002050,8.29e-08,564;UBERON:0000922,1.53e-07,592;UBERON:0005423,3.04e-07,581 | |||
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|short_description=p4@OLFM3 | |||
}} | }} |
Latest revision as of 06:10, 25 September 2015
Short description: | p4@OLFM3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_OLFM3_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 9bp_to_NM_058170, uc001dug.2, uc001duh.2, uc001dui.2, uc001duj.2_5end |
EntrezGene: | OLFM3 |
HGNC: | 17990 |
UniProt: | B3KTG9Q5T3V6Q96PB7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data