FFCP PHASE1:Hg19::chr19:50084561..50084603,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:50084561..50084603,+ to FFCP PHASE1:Hg19::chr19:50084561..50084603,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5639 | |EntrezGene=5639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9470 | |HGNC=9470 | ||
|TSSclassifier=strong | |||
|UniProt=O14669 | |UniProt=O14669 | ||
|association_with_transcript=0bp_to_ENST00000246794,NM_000951,uc002pon.3,uc010yaz.1_5end | |||
|cluster_id=chr19:50084561..50084603,+ | |||
|coexpression_cluster_id=C543 | |||
|description=CAGE_peak_1_at_PRRG2_5end | |||
|id=chr19:50084561..50084603,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.65e-33!254;CL:0002076!3.27e-19!43;CL:0000223!5.32e-17!59;CL:0002368!7.24e-10!13;CL:0002159!1.45e-09!13;CL:0002251!3.47e-09!21;CL:0000082!3.17e-07!19;CL:0002202!7.04e-07!9;CL:0002632!7.04e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.47e-18;42!CL:0002368;3.13e-13;13!CL:0002251;5.27e-11;20!CL:0002159;4.35e-10;14!CL:0002202;3.66e-09;9!CL:0002632;3.66e-09;9!CL:0000082;3.27e-08;19!CL:0000349;4.78e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.90e-28,253;CL:0002076,4.08e-24,42;CL:0000223,1.42e-19,58;CL:0002368,2.56e-13,13;CL:0002251,6.96e-11,20;CL:0002159,3.25e-10,14;CL:0002202,3.59e-09,9;CL:0002632,3.59e-09,9;CL:0000082,3.63e-08,19;CL:0000349,4.63e-08,19 | |||
|ontology_enrichment_development_v019=CL:0000223;2.67e-11;58 | |||
|ontology_enrichment_disease=DOID:305!3.01e-22!106;DOID:0050687!1.63e-14!143;DOID:1749!9.78e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.10e-09;14!DOID:299;3.60e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.25e-12,106;DOID:1749,1.23e-09,14;DOID:0050687,3.54e-08,143;DOID:299,4.47e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.15e-32!169;UBERON:0000925!3.15e-32!169;UBERON:0006595!3.15e-32!169;UBERON:0001007!9.71e-25!155;UBERON:0001555!9.71e-25!155;UBERON:0007026!9.71e-25!155;UBERON:0004921!3.76e-22!129;UBERON:0004185!3.76e-22!129;UBERON:0001004!2.20e-21!72;UBERON:0000077!2.32e-21!130;UBERON:0000065!1.58e-16!53;UBERON:0001041!3.12e-16!98;UBERON:0005911!5.14e-15!82;UBERON:0000466!8.92e-14!126;UBERON:0000464!1.26e-13!104;UBERON:0008947!5.68e-13!38;UBERON:0003258!5.68e-13!38;UBERON:0000072!1.93e-12!46;UBERON:0005153!7.50e-12!37;UBERON:0000062!9.46e-12!511;UBERON:0005178!2.00e-10!34;UBERON:0002224!2.00e-10!34;UBERON:0005631!2.13e-10!14;UBERON:0000158!2.13e-10!14;UBERON:0000064!2.84e-10!219;UBERON:0005181!6.70e-10!35;UBERON:0000161!8.12e-10!35;UBERON:0005177!5.76e-09!107;UBERON:0000481!7.97e-09!347;UBERON:0002530!8.01e-09!59;UBERON:0002048!9.59e-09!22;UBERON:0000117!9.59e-09!22;UBERON:0000171!9.59e-09!22;UBERON:0000170!9.59e-09!22;UBERON:0005597!9.59e-09!22;UBERON:0000118!9.59e-09!22;UBERON:0004807!1.20e-08!28;UBERON:0005157!1.49e-08!51;UBERON:0005156!2.67e-08!59;UBERON:0000990!2.67e-08!59;UBERON:0003124!3.22e-08!7;UBERON:0001048!3.41e-08!168;UBERON:0004175!3.83e-08!25;UBERON:0000166!5.06e-08!21;UBERON:0000922!8.77e-08!612;UBERON:0001008!1.07e-07!45;UBERON:0000468!1.61e-07!659;UBERON:0006554!2.42e-07!44;UBERON:0003133!2.61e-07!48;UBERON:0000480!2.94e-07!626;UBERON:0004802!3.17e-07!19;UBERON:0000115!3.17e-07!19;UBERON:0003104!3.33e-07!238;UBERON:0009142!3.33e-07!238;UBERON:0000467!4.86e-07!625;UBERON:0000063!4.86e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0005178;5.28e-12;34!UBERON:0002224;5.28e-12;34!UBERON:0004921;2.11e-11;33!UBERON:0005911;4.02e-11;36!UBERON:0005181;4.04e-11;35!UBERON:0004807;4.53e-11;22!UBERON:0002048;2.74e-10;22!UBERON:0000117;2.74e-10;22!UBERON:0000171;2.74e-10;22!UBERON:0000170;2.74e-10;22!UBERON:0005631;4.08e-09;10!UBERON:0000158;4.08e-09;10!UBERON:0004802;3.27e-08;19!UBERON:0000115;3.27e-08;19!UBERON:0001041;4.08e-08;14!UBERON:0001555;5.21e-08;54!UBERON:0000065;5.92e-08;44!UBERON:0001004;8.36e-08;65!UBERON:0000161;1.69e-07;19!UBERON:0000166;1.69e-07;19!UBERON:0007196;2.40e-07;15!UBERON:0001558;2.40e-07;15!UBERON:0000365;2.76e-07;5!UBERON:0001987;4.99e-07;4!UBERON:0000478;7.43e-07;24!UBERON:0005409;7.47e-07;22!UBERON:0000165;9.19e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.54e-30,160;UBERON:0000925,2.54e-30,160;UBERON:0006595,2.54e-30,160;UBERON:0001007,1.63e-21,145;UBERON:0001555,1.63e-21,145;UBERON:0007026,1.63e-21,145;UBERON:0004921,1.54e-18,118;UBERON:0001004,6.91e-16,74;UBERON:0005911,1.04e-15,82;UBERON:0005153,2.28e-14,37;UBERON:0005631,2.78e-14,14;UBERON:0000158,2.78e-14,14;UBERON:0005178,2.29e-13,34;UBERON:0002224,2.29e-13,34;UBERON:0001041,7.44e-13,87;UBERON:0005181,8.48e-13,35;UBERON:0005157,2.98e-12,47;UBERON:0000065,3.69e-11,54;UBERON:0005177,3.75e-11,101;UBERON:0003124,8.32e-11,7;UBERON:0006554,1.85e-10,47;UBERON:0002048,3.32e-10,22;UBERON:0000117,3.32e-10,22;UBERON:0000171,3.32e-10,22;UBERON:0000170,3.32e-10,22;UBERON:0005597,3.32e-10,22;UBERON:0000118,3.32e-10,22;UBERON:0001008,4.24e-10,48;UBERON:0004175,1.23e-09,25;UBERON:0000915,3.18e-09,52;UBERON:0000161,6.14e-09,36;UBERON:0008947,7.21e-09,38;UBERON:0003258,7.21e-09,38;UBERON:0009569,2.10e-08,112;UBERON:0000166,2.67e-08,22;UBERON:0004802,3.63e-08,19;UBERON:0000115,3.63e-08,19;UBERON:0004807,9.34e-08,28;UBERON:0007196,2.39e-07,15;UBERON:0001558,2.39e-07,15;UBERON:0000995,2.46e-07,21;UBERON:0003100,2.59e-07,41;UBERON:0000365,2.72e-07,5;UBERON:0002530,3.06e-07,59;UBERON:0001987,4.93e-07,4;UBERON:0004340,4.93e-07,4;UBERON:0000072,5.87e-07,47;UBERON:0005795,7.29e-07,22;UBERON:0003975,7.29e-07,22;UBERON:0000478,7.32e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,4.17747692052565,17.4450291993107,4.58726881473362,7.64924236862515,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0.154816123316076,6.43594857135249,6.92773613189975,6.65557218300218,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61958150995425,10.5645633604837,4.82019775619758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97750483428055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.76412986071539,6.00041465299836,4.58887352622406,0.487894824518382,0.927708378250397,0.580969714347592,0.621966330092223,1.26160425437814,0,0,0,0,0,0,0.591534000199219,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0.474541238222193,0.269662616320329,0.196221465125346,0,0,0,0,0,7.60530208930985,2.94848165003288,0.590789906681404,0,4.05861847192275,0,4.93876284338815,6.74410519545717,4.32274581370013,3.14800713539001,0,0,0,0,0,0,0,0.190254152234598,2.37061319387782,4.29243081047436,0,0,0,4.68669169933885,11.926731102119,4.96212840348353,3.94057499892532,4.65014301622339,8.81780162079986,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3376131436354,13.3148351608398,9.97887967987945,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,6.41620704970512,7.27439812593581,0,0,0,3.60959690325929,2.23344477602803,0,1.46139224653261,0.844413031143006,0,0.170093705276516,0,0,0.541892875087706,0,3.3133915495855,7.47968408035852,0,0,0,0,0.328014645699706,0,3.29731237272711,0,0,6.3169209179579,5.20048196829217,0,0,0,0,0,0,0,0,0,5.45440220691228,4.80475168412765,3.70076866234294,5.2602046044886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75266239629497,8.04362730642945,6.53345909167936,3.29503302718727,9.04061282609583,3.36942951335251,13.3029046061003,6.43225520579487,0,0,0,0,0,0,0,0,0.213648142254946,0,0.980160863924127,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,5.42707567183837,0,0,0.111443384277478,0,11.4597352674091,7.42411702081597,9.52198176507619,0,0,0,0,1.47787785689595,0.597743964753209,0.276283915531148,13.3524356362766,0,0,0,6.91986303834417,2.68531762013414,0,0.887790650732402,0,0,0,0,0,0,6.73441999970707,0,1.93448862085349,3.30529745380596,4.25497827182285,0.344743373241465,0,0,0,0,0,0.331737779793674,0.295547618953547,0,0,5.85579725970134,1.69290568708354,0,2.53620294826866,3.68006342080066,3.36806852958225,8.93203247249374,4.21348929648567,9.59462596833542,0,0,0,0,0,0,0,0,0,3.59112177950125,1.97894300007517,0,4.97630965539252,5.83819925722038,3.05515072466813,0,0,0,0,0,0,0,2.54364004611717,0,8.68085686268659,6.04953580243319,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,6.24815058006471,1.95984794828755,3.3082498500553,5.06707337901887,0,0.19351266257817,0.146178634172371,0.0821154570532092,4.07353869251362,0,0.677942222341597,0,0,0.0633107959558787,6.06209286477889,2.08412932653988,5.12287187374446,0,6.05179752047245,0.114536596165916,0.171594997861965,0,0,5.1852687615695,0,0,0,0,0,0,0,0,0,0,0,0,3.79390100948083,0,0,0,0,0,0,0.0824158583811665,0.202210631562555,0,0,0,0,0.160753148465019,0.137539436597234,0.415440338029185,0,0.77380195455795,0,2.34804281319486,6.77729082773104,4.09145787452985,0.105600336519406,0,4.60596473566669,0,0,0,0,0,0,0,0,0,0,4.54311924402056,0,0.258565912723101,0,0.171086837884329,7.04815022316672,2.66968531419237,2.35806457649499,2.07119527673598,0,0.395223263795889,0.121792598380896,6.38341257770182,0,0,0,0,3.61224421375539,0,0.244052529803926,0.1251909307065,0,0,0.18628920882415,0,0,0,0,0,0.468334905806882,1.88397337194073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,2.53574548030352,0,0,0,0,0,8.39277046316667,3.73246356019784,0,0,0,0,0,0,0,0,0,0,7.20513673456923,0,0,0,0,0.159633859057151,0,0,0.484100767249525,0,0,4.12220417704308,0.707818340086442,2.38457178078183,2.54156465530744,0,0,0,0.601682626794058,0,7.81514011233093,2.88097363929565,0.327543835020193,6.06209953489886,0,0,0.206686796501184,0,0,8.77212426971492,0.992422356778588,0,7.41022080309653,0.535701835878287,0,10.3184152720227,9.3341498454032,4.43511850813194,0,0,0.0679697329768317,0,0.118193840883968,2.8920164491938,2.43328587836593,0,2.5224494698241,0,0,0,0.142953088353313,0,0.929931402945002,0,0,0.62164849248911,1.3657478167516,3.45629830907046,10.7556839705069,0,0,8.04435395362765,12.6008777699228,0,0,4.58607270370949,3.33710794291826,3.29178397452127,0,0,0,3.39997695141398,5.61454712309054,8.7538341071002,0,2.03302947670128,0,6.94429080406698,9.87829223781692,4.80831033108706,8.46571133450741,0.490296643507811,1.41405928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| ||
|short_description=p1@PRRG2 | |||
}} | }} |
Latest revision as of 08:13, 19 September 2015
Short description: | p1@PRRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRRG2_5end |
Coexpression cluster: | C543_Alveolar_Corneal_Urothelial_amniotic_Esophageal_Tracheal_esophagus |
Association with transcript: | 0bp_to_ENST00000246794, NM_000951, uc002pon.3, uc010yaz.1_5end |
EntrezGene: | PRRG2 |
HGNC: | 9470 |
UniProt: | O14669 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.90e-28 | 253 |
endo-epithelial cell | 4.08e-24 | 42 |
endodermal cell | 1.42e-19 | 58 |
respiratory epithelial cell | 2.56e-13 | 13 |
epithelial cell of alimentary canal | 6.96e-11 | 20 |
general ecto-epithelial cell | 3.25e-10 | 14 |
epithelial cell of tracheobronchial tree | 3.59e-09 | 9 |
epithelial cell of lower respiratory tract | 3.59e-09 | 9 |
epithelial cell of lung | 3.63e-08 | 19 |
extraembryonic cell | 4.63e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.25e-12 | 106 |
squamous cell carcinoma | 1.23e-09 | 14 |
cell type cancer | 3.54e-08 | 143 |
adenocarcinoma | 4.47e-07 | 25 |