FFCP PHASE1:Hg19::chr19:38755417..38755428,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:38755417..38755428,+ to FFCP PHASE1:Hg19::chr19:38755417..38755428,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10653 | |EntrezGene=10653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11247 | |HGNC=11247 | ||
|TSSclassifier=strong | |||
|UniProt=O43291 | |UniProt=O43291 | ||
|association_with_transcript=215bp_to_uc002ohr.1,uc002ohs.1_5end | |||
|cluster_id=chr19:38755417..38755428,+ | |||
|description=CAGE_peak_8_at_SPINT2_5end | |||
|id=chr19:38755417..38755428,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.68e-23!254;CL:0002076!1.29e-12!43;CL:1000449!5.51e-10!16;CL:1000497!1.21e-09!18;CL:0002518!1.21e-09!18;CL:0000223!6.86e-09!59;CL:1000507!7.56e-08!12;CL:1000494!7.56e-08!12;CL:0002681!1.20e-07!13;CL:0002584!1.20e-07!13;CL:0000082!1.34e-07!19;CL:0002368!8.40e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;9.52e-19;15!CL:1000497;1.29e-18;17!CL:0002518;1.29e-18;17!CL:1000507;2.60e-17;10!CL:1000494;2.60e-17;10!CL:0002681;6.69e-14;12!CL:0002584;6.69e-14;12!CL:0002076;1.85e-11;42!CL:0002368;6.01e-10;13!CL:0000082;2.05e-09;19!CL:0002159;4.78e-09;14!CL:0002621;5.87e-07;3!CL:1000746;7.54e-07;7!CL:1000612;7.54e-07;7!CL:0002202;9.75e-07;9!CL:0002632;9.75e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.28e-27,253;CL:1000449,4.52e-19,15;CL:1000497,5.70e-19,17;CL:0002518,5.70e-19,17;CL:1000507,7.26e-18,10;CL:1000494,7.26e-18,10;CL:0002681,4.98e-14,12;CL:0002584,4.98e-14,12;CL:0002076,6.55e-14,42;CL:0000223,1.41e-11,58;CL:0002368,3.22e-10,13;CL:0000082,1.33e-09,19;CL:0002159,3.98e-09,14;CL:0002621,6.08e-07,3;CL:0002202,6.55e-07,9;CL:0002632,6.55e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!2.67e-12!106;DOID:299!6.24e-09!25;DOID:0050687!7.06e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:299;1.14e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.44e-09,106;DOID:299,1.66e-07,25;DOID:0050687,2.29e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000464!3.22e-15!104;UBERON:0000466!3.41e-11!126;UBERON:0005177!3.91e-11!107;UBERON:0000080!1.23e-10!18;UBERON:0002120!1.23e-10!18;UBERON:0004875!1.23e-10!18;UBERON:0005721!1.23e-10!18;UBERON:0005754!1.23e-10!18;UBERON:0007297!1.23e-10!18;UBERON:0006555!1.99e-10!17;UBERON:0005103!1.99e-10!17;UBERON:0000083!1.99e-10!17;UBERON:0009201!1.99e-10!17;UBERON:0004819!1.99e-10!17;UBERON:0006553!1.99e-10!17;UBERON:0003074!1.99e-10!17;UBERON:0003060!1.99e-10!17;UBERON:0004211!5.51e-10!16;UBERON:0001285!5.51e-10!16;UBERON:0007684!5.51e-10!16;UBERON:0003220!5.51e-10!16;UBERON:0004208!5.51e-10!16;UBERON:0006554!4.36e-09!44;UBERON:0004876!7.04e-09!20;UBERON:0002553!1.06e-08!70;UBERON:0002113!1.13e-08!27;UBERON:0003918!1.13e-08!27;UBERON:0005095!1.13e-08!27;UBERON:0007687!1.13e-08!27;UBERON:0001008!1.21e-08!45;UBERON:0000058!1.37e-08!26;UBERON:0000489!2.08e-08!32;UBERON:0003886!2.59e-08!63;UBERON:0003887!3.86e-08!21;UBERON:0009773!7.56e-08!12;UBERON:0001231!7.56e-08!12;UBERON:0004810!7.56e-08!12;UBERON:0000064!7.88e-08!219;UBERON:0004119!1.00e-07!169;UBERON:0000925!1.00e-07!169;UBERON:0006595!1.00e-07!169;UBERON:0005178!1.02e-07!34;UBERON:0002224!1.02e-07!34;UBERON:0001225!1.20e-07!13;UBERON:0008987!1.20e-07!13;UBERON:0004802!1.34e-07!19;UBERON:0000115!1.34e-07!19;UBERON:0001851!1.43e-07!16;UBERON:0004807!1.60e-07!28;UBERON:0005153!2.53e-07!37;UBERON:0005181!2.95e-07!35;UBERON:0002048!4.02e-07!22;UBERON:0000117!4.02e-07!22;UBERON:0000171!4.02e-07!22;UBERON:0000170!4.02e-07!22;UBERON:0005597!4.02e-07!22;UBERON:0000118!4.02e-07!22;UBERON:0003064!6.61e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.52e-19;15!UBERON:0004819;9.52e-19;15!UBERON:0001285;9.52e-19;15!UBERON:0007684;9.52e-19;15!UBERON:0004211;2.60e-17;10!UBERON:0009773;2.60e-17;10!UBERON:0001231;2.60e-17;10!UBERON:0004810;2.60e-17;10!UBERON:0001225;6.69e-14;12!UBERON:0008987;6.69e-14;12!UBERON:0006554;1.42e-13;30!UBERON:0001008;1.42e-13;30!UBERON:0004807;1.56e-13;22!UBERON:0002113;4.84e-12;24!UBERON:0011143;4.84e-12;24!UBERON:0001851;1.25e-10;15!UBERON:0000353;1.25e-10;15!UBERON:0004802;2.05e-09;19!UBERON:0000115;2.05e-09;19!UBERON:0005911;2.40e-09;36!UBERON:0000489;2.52e-09;29!UBERON:0002048;8.87e-08;22!UBERON:0000117;8.87e-08;22!UBERON:0000171;8.87e-08;22!UBERON:0000170;8.87e-08;22!UBERON:0001949;5.87e-07;3!UBERON:0000074;7.54e-07;7!UBERON:0001229;7.54e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,4.52e-19,15;UBERON:0009773,4.52e-19,15;UBERON:0001231,4.52e-19,15;UBERON:0001285,4.52e-19,15;UBERON:0007684,4.52e-19,15;UBERON:0004208,4.52e-19,15;UBERON:0004810,7.26e-18,10;UBERON:0006555,1.21e-17,16;UBERON:0004819,1.21e-17,16;UBERON:0001225,4.98e-14,12;UBERON:0008987,4.98e-14,12;UBERON:0005177,1.85e-12,101;UBERON:0006554,1.82e-11,47;UBERON:0001008,4.16e-11,48;UBERON:0002113,4.86e-11,26;UBERON:0003918,4.86e-11,26;UBERON:0011143,4.86e-11,26;UBERON:0005095,4.86e-11,26;UBERON:0007687,4.86e-11,26;UBERON:0001851,9.91e-11,15;UBERON:0000353,9.91e-11,15;UBERON:0004807,5.61e-10,28;UBERON:0004802,1.33e-09,19;UBERON:0000115,1.33e-09,19;UBERON:0009569,8.25e-09,112;UBERON:0005911,1.10e-08,82;UBERON:0000489,1.15e-08,31;UBERON:0005153,2.65e-08,37;UBERON:0002048,6.19e-08,22;UBERON:0000117,6.19e-08,22;UBERON:0000171,6.19e-08,22;UBERON:0000170,6.19e-08,22;UBERON:0005597,6.19e-08,22;UBERON:0000118,6.19e-08,22;UBERON:0005157,9.22e-08,47;UBERON:0001949,6.08e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,1.96587149201207,6.97801167972428,1.09220686065086,0.791300934685361,0,0,0,0,0,0,0.246242116153576,0,0,0,0.136874425072884,0,0,0,0,0,0.383829398097213,0,4.59710612239464,1.204823675113,2.9580320813343,0,0.284338464974843,0,0,0,0.217010870715852,0,0.32389366601898,0,0,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0,0,0.661044872784862,0.954053754535364,1.1384259382189,1.76171156811282,0.382273228125229,0,0,0.790152254325231,0,0,0,0.167186495390678,0.651844533267181,0,0,0.222820913770347,0,0,0.541607727530031,0.25618263945135,0.780356085359269,0,0.276350017785848,0,0.14828656316206,0,1.04535523804977,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0.966182642624386,1.96468613246569,4.00724817121796,2.22470665670658,0.649094787309367,1.0447784237956,0.664789802594326,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,9.15797509499322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31913023795956,5.18217629122586,4.58887352622406,0.853815942907168,0.132529768321485,0.580969714347592,0.518305275076852,0.756962552626885,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,1.31700342490351,1.1240175325762,2.11110842064425,2.03694579348765,0,0,1.44331342025273,0.231860809950154,0.234817388471643,0,0,0.380508304469197,2.37061319387782,0,0,0,0,0.93733833986777,1.84780341018745,2.26840155587818,0.716468181622786,1.16253575405585,1.53353071666084,0,0.176096868026452,0,0.432359860250884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0.215714200818617,0.106727557803444,1.21251028578504,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,1.28913384510255,0,0,0,4.96319574198153,1.69433741629712,5.49044838423799,10.2297457257282,1.79437769117889,1.13733384070897,0.170093705276516,0.215915916102139,3.08454505380579,2.16757150035082,2.00675909541941,3.05851527654046,1.66215201785745,1.56712328305525,0.219259876645935,0,0.256450125116389,0.984043937099117,0.325378394664303,0.206082023295445,0,0,1.72279661398852,3.25030123018261,0,0,0,0,0,0,0,0,0,5.12383237619032,0.768760269460425,1.65896526242959,2.32662895967765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,1.25088746543166,0.670302275535787,0,0.282431402330337,3.87454835404107,1.68471475667626,1.33029046061003,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0.427296284509893,0,0,0.929015875628594,0,0.426851060090485,0.159426272728822,0.399158742865633,0,0.423347165447766,0.324621940274555,0.842391534340376,0,0,2.50634477090067,0.677167111206413,0,0,0.851692475380653,0,0,0,0,0,0.278406173895242,7.38524393686274,0.540911356951966,0.33307196799782,1.4098700508785,0.935702702041099,0,0.849523652246594,0,0,0.95497793895076,2.37571744666111,0.614321404198464,0,0,0,0,0.422250816255987,0,0,0.503865495708552,0,0,0,3.6846023970404,0,0.511572370226872,0,0,0,0,0,0,2.08342208868187,0.0874599999961957,0,3.52759689685049,2.54253650292766,3.07303986298317,0.689486746482929,0,0,0,0.60298219312704,0,0.110579259931225,0,0,0,1.11538995422883,0.153900517007594,0,7.14748103602986,1.16684937732704,1.3037684630641,0.957003479195758,0.915975934018623,2.13213910407454,1.02193298195737,0.31396051279005,1.16348177330109,0,0,0,0,1.11255605286265,9.07291677470516,1.46909527343233,0.706765357169704,0,0,0.176915129006678,0.611030144933625,0,0,0,0.134802265961354,0,0.234264445725339,0,0.978323094660449,0,0,0,0,0.063186579628488,0,0.103688191397247,0.664653872707185,0.661983911750998,0.941798755221676,2.38944859545918,7.11523865074482,0,1.21491816834592,1.37189356380129,0.957651272384428,0.873633341210151,0.687944129886466,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.253243183823515,1.17330829640882,2.48492342779755,0.213452994739353,0,0.144090417154106,0.572682980829578,0,0.288109595976299,0.621262677827163,1.17847017308398,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0.458320848023367,0,0.599037001496973,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.272406812223151,0.643012593860077,1.10031549277787,0.415440338029185,0,0,0.303747783290123,1.67717343799633,0.315222829196793,0.314727528809989,1.05600336519407,0,0.575745591958336,0,0,0,0,0,0,0,0.574647645245373,0,0,0,2.65013777824443,0.258565912723101,1.05786081394152,1.88195521672762,1.40963004463334,0.106787412567695,0.314408610199332,0,0.496166021811951,0,1.58330377895165,0,0,0,0,0,0,0,0.244052529803926,0.3755727921195,0.57340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| ||
|short_description=p8@SPINT2 | |||
}} | }} |
Latest revision as of 19:10, 17 September 2015
Short description: | p8@SPINT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SPINT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 215bp_to_uc002ohr.1, uc002ohs.1_5end |
EntrezGene: | SPINT2 |
HGNC: | 11247 |
UniProt: | O43291 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.28e-27 | 253 |
epithelial cell of nephron | 4.52e-19 | 15 |
kidney cell | 5.70e-19 | 17 |
kidney epithelial cell | 5.70e-19 | 17 |
kidney tubule cell | 7.26e-18 | 10 |
nephron tubule epithelial cell | 7.26e-18 | 10 |
kidney cortical cell | 4.98e-14 | 12 |
renal cortical epithelial cell | 4.98e-14 | 12 |
endo-epithelial cell | 6.55e-14 | 42 |
endodermal cell | 1.41e-11 | 58 |
respiratory epithelial cell | 3.22e-10 | 13 |
epithelial cell of lung | 1.33e-09 | 19 |
general ecto-epithelial cell | 3.98e-09 | 14 |
gingival epithelial cell | 6.08e-07 | 3 |
epithelial cell of tracheobronchial tree | 6.55e-07 | 9 |
epithelial cell of lower respiratory tract | 6.55e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 4.52e-19 | 15 |
renal tubule | 4.52e-19 | 15 |
nephron tubule | 4.52e-19 | 15 |
nephron | 4.52e-19 | 15 |
uriniferous tubule | 4.52e-19 | 15 |
nephrogenic mesenchyme | 4.52e-19 | 15 |
nephron tubule epithelium | 7.26e-18 | 10 |
excretory tube | 1.21e-17 | 16 |
kidney epithelium | 1.21e-17 | 16 |
cortex of kidney | 4.98e-14 | 12 |
renal parenchyma | 4.98e-14 | 12 |
trunk region element | 1.85e-12 | 101 |
urinary system structure | 1.82e-11 | 47 |
renal system | 4.16e-11 | 48 |
kidney | 4.86e-11 | 26 |
kidney mesenchyme | 4.86e-11 | 26 |
upper urinary tract | 4.86e-11 | 26 |
kidney rudiment | 4.86e-11 | 26 |
kidney field | 4.86e-11 | 26 |
cortex | 9.91e-11 | 15 |
parenchyma | 9.91e-11 | 15 |
respiratory system epithelium | 5.61e-10 | 28 |
respiratory tract epithelium | 1.33e-09 | 19 |
lung epithelium | 1.33e-09 | 19 |
subdivision of trunk | 8.25e-09 | 112 |
endo-epithelium | 1.10e-08 | 82 |
cavitated compound organ | 1.15e-08 | 31 |
epithelial bud | 2.65e-08 | 37 |
lung | 6.19e-08 | 22 |
respiratory tube | 6.19e-08 | 22 |
respiration organ | 6.19e-08 | 22 |
pair of lungs | 6.19e-08 | 22 |
lung primordium | 6.19e-08 | 22 |
lung bud | 6.19e-08 | 22 |
epithelial fold | 9.22e-08 | 47 |
gingival epithelium | 6.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.44e-09 | 106 |
adenocarcinoma | 1.66e-07 | 25 |
cell type cancer | 2.29e-07 | 143 |