FFCP PHASE1:Hg19::chr18:56296182..56296196,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:56296182..56296196,- to FFCP PHASE1:Hg19::chr18:56296182..56296196,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115701 | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20565 | |HGNC=20565 | ||
|TSSclassifier=strong | |||
|UniProt=Q86TB3 | |UniProt=Q86TB3 | ||
|association_with_transcript=0bp_to_ENST00000361673,NM_052947,uc002lhj.3_5end | |||
|cluster_id=chr18:56296182..56296196,- | |||
|coexpression_cluster_id=C1057 | |||
|description=CAGE_peak_8_at_ALPK2_5end | |||
|id=chr18:56296182..56296196,- | |||
|ontology_enrichment_celltype=CL:0002322!3.72e-07!5 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;6.53e-14;4!UBERON:0007284;6.53e-14;4!UBERON:0006603;1.23e-09;65!UBERON:0004872;6.51e-08;7!UBERON:0004140;1.55e-07;1!UBERON:0010226;1.86e-07;1!UBERON:0010227;2.16e-07;1!UBERON:0000358;2.67e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.58e-13;2!DOID:178;1.75e-07;1!DOID:326;1.75e-07;1!DOID:3978;1.75e-07;1!DOID:3394;1.75e-07;1!DOID:5844;1.75e-07;1!DOID:1287;4.58e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.58e-13,2;DOID:178,1.75e-07,1;DOID:326,1.75e-07,1;DOID:3978,1.75e-07,1;DOID:3394,1.75e-07,1;DOID:5844,1.75e-07,1;DOID:1287,4.58e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!9.82e-09!3;UBERON:0003978!1.06e-08!3;UBERON:0009751!1.06e-08!3;UBERON:0000946!1.06e-08!3;UBERON:0002523!1.06e-08!3;UBERON:0005983!1.06e-08!3;UBERON:0002165!1.06e-08!3;UBERON:0002062!1.06e-08!3;UBERON:0007280!1.06e-08!3;UBERON:0007100!8.33e-08!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;1.71e-18;3!UBERON:0003978;2.29e-18;3!UBERON:0000946;2.29e-18;3!UBERON:0007100;4.93e-18;25!UBERON:0002081;9.27e-13;2!UBERON:0002133;1.07e-12;2!UBERON:0002370;2.29e-12;2!UBERON:0005058;2.29e-12;2!UBERON:0009113;2.29e-12;2!UBERON:0004177;1.04e-10;5!UBERON:0005057;1.04e-10;5!UBERON:0000948;2.76e-09;22!UBERON:0002084;1.86e-07;1!UBERON:0002082;1.86e-07;1!UBERON:0002079;2.16e-07;1!UBERON:0002146;2.16e-07;1!UBERON:0005623;2.16e-07;1!UBERON:0002135;2.52e-07;1!UBERON:0001389;3.82e-07;1!UBERON:0000026;3.82e-07;1!UBERON:0008784;3.82e-07;1!UBERON:0006058;3.82e-07;1!UBERON:0003663;3.82e-07;1!UBERON:0004256;3.82e-07;1!UBERON:0004708;3.82e-07;1!UBERON:0002101;3.82e-07;1!UBERON:0004709;3.82e-07;1!UBERON:0002529;3.82e-07;1!UBERON:0010538;3.82e-07;1!UBERON:0003661;3.82e-07;1!UBERON:0010890;3.82e-07;1!UBERON:0002471;3.82e-07;1!UBERON:0001383;3.82e-07;1!UBERON:0010758;3.82e-07;1!UBERON:0010707;3.82e-07;1!UBERON:0000978;3.82e-07;1!UBERON:0002103;3.82e-07;1!UBERON:0001665;3.82e-07;1!UBERON:0003823;3.82e-07;1!UBERON:0000154;3.82e-07;1!UBERON:0010709;3.82e-07;1!UBERON:0002372;4.84e-07;1!UBERON:0002134;4.84e-07;1!UBERON:0001961;4.84e-07;1!UBERON:0001744;4.84e-07;1!UBERON:0005208;4.84e-07;1!UBERON:0004145;4.84e-07;1!UBERON:0005946;4.84e-07;1!UBERON:0001042;4.84e-07;1!UBERON:0005965;4.84e-07;1!UBERON:0001735;4.84e-07;1!UBERON:0002078;4.84e-07;1!UBERON:0007029;7.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,1.98e-18,3;UBERON:0003978,2.36e-18,3;UBERON:0009751,2.36e-18,3;UBERON:0000946,2.36e-18,3;UBERON:0002523,2.36e-18,3;UBERON:0005983,2.36e-18,3;UBERON:0002165,2.36e-18,3;UBERON:0002062,2.36e-18,3;UBERON:0007280,2.36e-18,3;UBERON:0007100,1.41e-16,27;UBERON:0002081,1.07e-12,2;UBERON:0010227,1.07e-12,2;UBERON:0002133,1.21e-12,2;UBERON:0001042,3.13e-09,10;UBERON:0009145,3.13e-09,10;UBERON:0000948,1.87e-08,24;UBERON:0005498,1.87e-08,24;UBERON:0004140,1.87e-08,24;UBERON:0009881,1.87e-08,24;UBERON:0004141,1.87e-08,24;UBERON:0003084,1.87e-08,24;UBERON:0007005,1.87e-08,24;UBERON:0004139,1.87e-08,24;UBERON:0004291,1.87e-08,24;UBERON:0003103,1.88e-08,68;UBERON:0006562,2.11e-08,11;UBERON:0007023,2.25e-08,114;UBERON:0004797,3.83e-08,7;UBERON:0004177,8.07e-08,7;UBERON:0005057,8.07e-08,7;UBERON:0002084,1.86e-07,1;UBERON:0002082,1.86e-07,1;UBERON:0010226,1.86e-07,1;UBERON:0002146,1.98e-07,1;UBERON:0005623,1.98e-07,1;UBERON:0002079,2.23e-07,1;UBERON:0002135,2.52e-07,1;UBERON:0005418,4.06e-07,1;UBERON:0001389,4.06e-07,1;UBERON:0000026,4.06e-07,1;UBERON:0008784,4.06e-07,1;UBERON:0006058,4.06e-07,1;UBERON:0003663,4.06e-07,1;UBERON:0004256,4.06e-07,1;UBERON:0004708,4.06e-07,1;UBERON:0002101,4.06e-07,1;UBERON:0004709,4.06e-07,1;UBERON:0002529,4.06e-07,1;UBERON:0010538,4.06e-07,1;UBERON:0003661,4.06e-07,1;UBERON:0010890,4.06e-07,1;UBERON:0002471,4.06e-07,1;UBERON:0001383,4.06e-07,1;UBERON:0004357,4.06e-07,1;UBERON:0004347,4.06e-07,1;UBERON:0005420,4.06e-07,1;UBERON:0005732,4.06e-07,1;UBERON:0010758,4.06e-07,1;UBERON:0010707,4.06e-07,1;UBERON:0000978,4.06e-07,1;UBERON:0002103,4.06e-07,1;UBERON:0001665,4.06e-07,1;UBERON:0003823,4.06e-07,1;UBERON:0000154,4.06e-07,1;UBERON:0010709,4.06e-07,1;UBERON:0005733,4.06e-07,1;UBERON:0005730,4.06e-07,1;UBERON:0002372,4.57e-07,1;UBERON:0001961,4.57e-07,1;UBERON:0001744,4.57e-07,1;UBERON:0001735,4.57e-07,1;UBERON:0002134,5.45e-07,1;UBERON:0005208,5.45e-07,1;UBERON:0005946,5.45e-07,1;UBERON:0005965,5.45e-07,1;UBERON:0002078,5.45e-07,1;UBERON:0007029,8.18e-07,1 | |||
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| ||
|short_description=p8@ALPK2 | |||
}} | }} |
Latest revision as of 00:15, 20 September 2015
Short description: | p8@ALPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ALPK2_5end |
Coexpression cluster: | C1057_heart_teratocarcinoma_lymphangiectasia_plasma_adult_left_skeletal |
Association with transcript: | 0bp_to_ENST00000361673, NM_052947, uc002lhj.3_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.58e-13 | 2 |
vascular disease | 1.75e-07 | 1 |
ischemia | 1.75e-07 | 1 |
extrinsic cardiomyopathy | 1.75e-07 | 1 |
myocardial ischemia | 1.75e-07 | 1 |
myocardial infarction | 1.75e-07 | 1 |
cardiovascular system disease | 4.58e-07 | 4 |