FFCP PHASE1:Hg19::chr18:40857389..40857405,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:40857389..40857405,- to FFCP PHASE1:Hg19::chr18:40857389..40857405,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6860 | |EntrezGene=6860 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11512 | |HGNC=11512 | ||
|TSSclassifier=strong | |||
|UniProt=F5GY31 | |UniProt=F5GY31 | ||
|association_with_transcript=-48bp_to_ENST00000442661_5end | |||
|cluster_id=chr18:40857389..40857405,- | |||
|coexpression_cluster_id=C759 | |||
|description=CAGE_peak_3_at_SYT4_5end | |||
|id=chr18:40857389..40857405,- | |||
|ontology_enrichment_celltype=CL:0000047!6.95e-12!8;CL:0000540!3.06e-09!6;CL:0000031!3.06e-09!6;CL:0000404!3.06e-09!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.50e-21;82!UBERON:0006215;2.91e-09;3 | |||
|ontology_enrichment_disease=DOID:171!1.17e-07!10;DOID:169!4.39e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:171;3.05e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.91e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.12e-73!94;UBERON:0001016!1.12e-73!94;UBERON:0001017!1.28e-72!82;UBERON:0005743!1.09e-70!86;UBERON:0001049!1.60e-67!57;UBERON:0005068!1.60e-67!57;UBERON:0006241!1.60e-67!57;UBERON:0007135!1.60e-67!57;UBERON:0002616!1.44e-56!59;UBERON:0000955!1.23e-54!69;UBERON:0006238!1.23e-54!69;UBERON:0002780!1.33e-54!41;UBERON:0001890!1.33e-54!41;UBERON:0006240!1.33e-54!41;UBERON:0003080!5.07e-53!42;UBERON:0002346!4.93e-48!90;UBERON:0003075!7.43e-47!86;UBERON:0007284!7.43e-47!86;UBERON:0007023!6.43e-44!115;UBERON:0002020!1.31e-43!34;UBERON:0003528!1.31e-43!34;UBERON:0001893!1.65e-43!34;UBERON:0002791!8.59e-42!33;UBERON:0001869!3.70e-41!32;UBERON:0000924!2.54e-38!173;UBERON:0006601!2.54e-38!173;UBERON:0004121!6.17e-37!169;UBERON:0003056!1.99e-36!61;UBERON:0002619!2.53e-35!22;UBERON:0001950!2.84e-32!20;UBERON:0000956!2.28e-30!25;UBERON:0000203!2.28e-30!25;UBERON:0000033!1.15e-28!123;UBERON:0000153!1.43e-26!129;UBERON:0007811!1.43e-26!129;UBERON:0003076!4.35e-15!15;UBERON:0003057!4.35e-15!15;UBERON:0002420!9.26e-15!9;UBERON:0007245!9.26e-15!9;UBERON:0010009!9.26e-15!9;UBERON:0010011!9.26e-15!9;UBERON:0000454!9.26e-15!9;UBERON:0002308!1.19e-14!9;UBERON:0000125!1.19e-14!9;UBERON:0000025!4.01e-14!194;UBERON:0004732!1.86e-12!13;UBERON:0001894!2.21e-12!7;UBERON:0006222!2.21e-12!7;UBERON:0009663!1.27e-11!7;UBERON:0000200!1.72e-11!6;UBERON:0004733!3.24e-11!12;UBERON:0002028!3.24e-11!12;UBERON:0007277!3.24e-11!12;UBERON:0001871!6.26e-11!7;UBERON:0004111!1.53e-10!241;UBERON:0002298!7.21e-10!8;UBERON:0002021!8.37e-10!5;UBERON:0001872!9.83e-10!5;UBERON:0000349!1.58e-09!5;UBERON:0003296!1.46e-08!4;UBERON:0010133!1.46e-08!4;UBERON:0000369!5.77e-08!4;UBERON:0002435!5.77e-08!4;UBERON:0000204!5.77e-08!4;UBERON:0010082!5.77e-08!4;UBERON:0000922!1.54e-07!612;UBERON:0002680!2.32e-07!9;UBERON:0001895!2.32e-07!9;UBERON:0010092!2.32e-07!9;UBERON:0000064!3.74e-07!219;UBERON:0000477!4.44e-07!286;UBERON:0000923!4.47e-07!604;UBERON:0005291!4.47e-07!604;UBERON:0006598!4.47e-07!604;UBERON:0002532!4.47e-07!604;UBERON:0002050!5.06e-07!605;UBERON:0005423!5.06e-07!605;UBERON:0000483!7.43e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.55e-50;22!UBERON:0001869;1.14e-49;32!UBERON:0003528;1.23e-48;34!UBERON:0002020;1.23e-48;34!UBERON:0001893;4.77e-48;34!UBERON:0002780;1.23e-47;41!UBERON:0001890;1.23e-47;41!UBERON:0002791;2.72e-46;32!UBERON:0000073;2.73e-46;53!UBERON:0002616;2.73e-46;53!UBERON:0001950;4.18e-46;20!UBERON:0000956;6.17e-44;25!UBERON:0000203;6.17e-44;25!UBERON:0000955;2.87e-34;68!UBERON:0001017;1.07e-32;75!UBERON:0001016;9.23e-28;83!UBERON:0004732;9.09e-18;13!UBERON:0004733;5.50e-16;12!UBERON:0002028;5.50e-16;12!UBERON:0000200;7.12e-16;6!UBERON:0002298;1.98e-14;6!UBERON:0002021;1.96e-13;5!UBERON:0001894;1.98e-13;7!UBERON:0001872;2.44e-13;5!UBERON:0002420;2.53e-13;9!UBERON:0007245;2.53e-13;9!UBERON:0010009;2.53e-13;9!UBERON:0010011;2.53e-13;9!UBERON:0000454;2.53e-13;9!UBERON:0000125;3.22e-13;9!UBERON:0002308;3.22e-13;9!UBERON:0000349;4.85e-13;5!UBERON:0001871;5.06e-13;6!UBERON:0007023;1.12e-12;114!UBERON:0003296;1.22e-11;4!UBERON:0010133;1.22e-11;4!UBERON:0011216;3.68e-11;132!UBERON:0000369;8.31e-11;4!UBERON:0002435;8.31e-11;4!UBERON:0000204;8.31e-11;4!UBERON:0002680;2.23e-10;9!UBERON:0001895;2.23e-10;9!UBERON:0009663;3.92e-09;7!UBERON:0001870;5.10e-09;3!UBERON:0000988;1.96e-08;3!UBERON:0005383;2.66e-08;3!UBERON:0005382;2.66e-08;3!UBERON:0001896;1.11e-07;3!UBERON:0005290;1.11e-07;3!UBERON:0010314;6.37e-07;132!UBERON:0001905;8.72e-07;2!UBERON:0002757;8.72e-07;2!UBERON:0010134;8.72e-07;2!UBERON:0005408;8.72e-07;2!UBERON:0001899;8.72e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.35e-86,56;UBERON:0005068,5.35e-86,56;UBERON:0006241,5.35e-86,56;UBERON:0007135,5.35e-86,56;UBERON:0001016,9.79e-84,89;UBERON:0000073,1.84e-83,53;UBERON:0002616,1.84e-83,53;UBERON:0001017,2.10e-81,81;UBERON:0000955,4.78e-74,68;UBERON:0006238,4.78e-74,68;UBERON:0002780,4.67e-68,41;UBERON:0001890,4.67e-68,41;UBERON:0003080,4.67e-68,41;UBERON:0006240,4.67e-68,41;UBERON:0002346,1.91e-59,86;UBERON:0003075,1.86e-57,82;UBERON:0007284,1.86e-57,82;UBERON:0003528,8.15e-56,34;UBERON:0002020,8.15e-56,34;UBERON:0001869,1.02e-55,32;UBERON:0001893,1.12e-55,34;UBERON:0002791,2.10e-51,32;UBERON:0002619,1.61e-50,22;UBERON:0010371,9.11e-47,104;UBERON:0001950,4.19e-46,20;UBERON:0003056,2.88e-45,61;UBERON:0000956,6.38e-44,25;UBERON:0000203,6.38e-44,25;UBERON:0004121,1.91e-43,171;UBERON:0000924,1.91e-43,171;UBERON:0006601,1.91e-43,171;UBERON:0007023,2.53e-36,114;UBERON:0010314,1.27e-32,132;UBERON:0011216,1.42e-32,223;UBERON:0000025,9.45e-20,192;UBERON:0003076,2.32e-18,15;UBERON:0003057,2.32e-18,15;UBERON:0004732,9.09e-18,13;UBERON:0004733,5.71e-16,12;UBERON:0002028,5.71e-16,12;UBERON:0007277,5.71e-16,12;UBERON:0000200,7.41e-16,6;UBERON:0002298,2.08e-14,6;UBERON:0001894,1.96e-13,7;UBERON:0006222,1.96e-13,7;UBERON:0002021,1.99e-13,5;UBERON:0001872,2.51e-13,5;UBERON:0002420,2.66e-13,9;UBERON:0007245,2.66e-13,9;UBERON:0010009,2.66e-13,9;UBERON:0010011,2.66e-13,9;UBERON:0000454,2.66e-13,9;UBERON:0004111,2.74e-13,240;UBERON:0000125,3.54e-13,9;UBERON:0002308,3.54e-13,9;UBERON:0001871,4.85e-13,6;UBERON:0000349,4.98e-13,5;UBERON:0003296,1.22e-11,4;UBERON:0010133,1.22e-11,4;UBERON:0000369,8.74e-11,4;UBERON:0002435,8.74e-11,4;UBERON:0000204,8.74e-11,4;UBERON:0010082,8.74e-11,4;UBERON:0002680,2.23e-10,9;UBERON:0001895,2.23e-10,9;UBERON:0010092,2.23e-10,9;UBERON:0000483,2.61e-10,306;UBERON:0000119,4.37e-10,309;UBERON:0009663,4.21e-09,7;UBERON:0001870,5.10e-09,3;UBERON:0000988,1.96e-08,3;UBERON:0005383,2.73e-08,3;UBERON:0005382,2.73e-08,3;UBERON:0001896,1.16e-07,3;UBERON:0005290,1.16e-07,3;UBERON:0010096,1.16e-07,3;UBERON:0000923,6.06e-07,560;UBERON:0010316,6.06e-07,560;UBERON:0005291,6.06e-07,560;UBERON:0006598,6.06e-07,560;UBERON:0010317,6.06e-07,560;UBERON:0002532,6.06e-07,560;UBERON:0001905,8.49e-07,2;UBERON:0002757,8.49e-07,2;UBERON:0010134,8.49e-07,2;UBERON:0005408,8.49e-07,2;UBERON:0001899,8.49e-07,2;UBERON:0002050,8.86e-07,564 | |||
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| ||
|short_description=p3@SYT4 | |||
}} | }} |
Latest revision as of 13:48, 19 September 2015
Short description: | p3@SYT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYT4_5end |
Coexpression cluster: | C759_nonsmall_gastrointestinal_occipital_pineal_cerebellum_small_argyrophil |
Association with transcript: | -48bp_to_ENST00000442661_5end |
EntrezGene: | SYT4 |
HGNC: | 11512 |
UniProt: | F5GY31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.91e-08 | 10 |