FFCP PHASE1:Hg19::chr17:42989121..42989166,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:42989121..42989166,- to FFCP PHASE1:Hg19::chr17:42989121..42989166,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2670 | |EntrezGene=2670 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4235 | |HGNC=4235 | ||
|TSSclassifier=strong | |||
|UniProt=A1L194 | |UniProt=A1L194 | ||
|association_with_transcript=-323bp_to_BC127871_5end | |||
|cluster_id=chr17:42989121..42989166,- | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_7_at_GFAP_5end | |||
|id=chr17:42989121..42989166,- | |||
|ontology_enrichment_celltype=CL:0000128!3.06e-15!7;CL:0000126!3.06e-15!7;CL:0000127!3.06e-15!7;CL:0002453!3.06e-15!7;CL:0002605!1.98e-10!3;CL:0002603!3.42e-09!3;CL:0002319!2.25e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002605;2.47e-12;3!CL:0000128;5.78e-09;7!CL:0000126;5.78e-09;7!CL:0000127;5.78e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,2.12e-12,3;CL:0000128,5.60e-09,7;CL:0000126,5.60e-09,7;CL:0000127,5.60e-09,7;CL:0002453,5.60e-09,7 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.73e-21;82!UBERON:0006241;2.04e-13;3!UBERON:0003057;2.04e-13;3!UBERON:0010122;9.38e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p7@GFAP | |||
}} | }} |
Latest revision as of 23:46, 24 September 2015
Short description: | p7@GFAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GFAP_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | -323bp_to_BC127871_5end |
EntrezGene: | GFAP |
HGNC: | 4235 |
UniProt: | A1L194 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 2.12e-12 | 3 |
oligodendrocyte | 5.60e-09 | 7 |
macroglial cell | 5.60e-09 | 7 |
astrocyte | 5.60e-09 | 7 |
oligodendrocyte precursor cell | 5.60e-09 | 7 |