FFCP PHASE1:Hg19::chr17:42385998..42386020,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:42385998..42386020,+ to FFCP PHASE1:Hg19::chr17:42385998..42386020,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10900 | |EntrezGene=10900 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16984 | |HGNC=16984 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000225441_5end | |||
|cluster_id=chr17:42385998..42386020,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_RUNDC3A_5end | |||
|id=chr17:42385998..42386020,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.52e-20;82!UBERON:0006215;2.23e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.76e-47!115;UBERON:0001049!6.59e-43!57;UBERON:0005068!6.59e-43!57;UBERON:0006241!6.59e-43!57;UBERON:0007135!6.59e-43!57;UBERON:0001017!3.06e-41!82;UBERON:0000073!1.01e-39!94;UBERON:0001016!1.01e-39!94;UBERON:0005743!1.08e-39!86;UBERON:0000955!1.08e-35!69;UBERON:0006238!1.08e-35!69;UBERON:0002616!3.43e-35!59;UBERON:0002780!2.05e-34!41;UBERON:0001890!2.05e-34!41;UBERON:0006240!2.05e-34!41;UBERON:0003080!3.16e-33!42;UBERON:0002346!2.33e-32!90;UBERON:0003075!2.88e-32!86;UBERON:0007284!2.88e-32!86;UBERON:0001893!1.73e-27!34;UBERON:0002020!2.76e-27!34;UBERON:0003528!2.76e-27!34;UBERON:0002791!2.26e-26!33;UBERON:0001869!8.09e-26!32;UBERON:0003056!4.44e-24!61;UBERON:0002619!9.92e-23!22;UBERON:0000924!7.68e-22!173;UBERON:0006601!7.68e-22!173;UBERON:0004121!2.18e-21!169;UBERON:0000033!4.43e-21!123;UBERON:0001950!1.15e-20!20;UBERON:0000153!1.65e-20!129;UBERON:0007811!1.65e-20!129;UBERON:0000956!4.97e-19!25;UBERON:0000203!4.97e-19!25;UBERON:0000025!2.78e-12!194;UBERON:0003076!1.29e-10!15;UBERON:0003057!1.29e-10!15;UBERON:0002420!4.19e-10!9;UBERON:0007245!4.19e-10!9;UBERON:0010009!4.19e-10!9;UBERON:0010011!4.19e-10!9;UBERON:0000454!4.19e-10!9;UBERON:0000922!4.20e-10!612;UBERON:0002308!8.54e-10!9;UBERON:0000125!8.54e-10!9;UBERON:0004732!4.35e-09!13;UBERON:0000064!7.26e-09!219;UBERON:0004111!8.89e-09!241;UBERON:0001894!2.28e-08!7;UBERON:0006222!2.28e-08!7;UBERON:0002050!2.73e-08!605;UBERON:0005423!2.73e-08!605;UBERON:0000468!2.91e-08!659;UBERON:0004733!3.28e-08!12;UBERON:0002028!3.28e-08!12;UBERON:0007277!3.28e-08!12;UBERON:0000200!4.82e-08!6;UBERON:0009663!5.00e-08!7;UBERON:0000923!5.20e-08!604;UBERON:0005291!5.20e-08!604;UBERON:0006598!5.20e-08!604;UBERON:0002532!5.20e-08!604;UBERON:0001871!2.10e-07!7;UBERON:0000483!2.62e-07!309;UBERON:0000119!5.17e-07!312;UBERON:0000349!7.48e-07!5;UBERON:0000475!7.76e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.79e-43;41!UBERON:0001890;1.79e-43;41!UBERON:0001893;1.42e-41;34!UBERON:0003528;5.36e-41;34!UBERON:0002020;5.36e-41;34!UBERON:0001869;6.55e-41;32!UBERON:0000073;6.88e-41;53!UBERON:0002616;6.88e-41;53!UBERON:0002791;2.07e-40;32!UBERON:0002619;3.04e-39;22!UBERON:0001950;1.32e-35;20!UBERON:0000956;7.26e-34;25!UBERON:0000203;7.26e-34;25!UBERON:0000955;6.90e-30;68!UBERON:0001017;9.74e-29;75!UBERON:0001016;4.17e-27;83!UBERON:0002420;1.42e-16;9!UBERON:0007245;1.42e-16;9!UBERON:0010009;1.42e-16;9!UBERON:0010011;1.42e-16;9!UBERON:0000454;1.42e-16;9!UBERON:0000125;4.74e-16;9!UBERON:0002308;4.74e-16;9!UBERON:0007023;5.70e-16;114!UBERON:0001894;1.70e-13;7!UBERON:0004732;2.29e-13;13!UBERON:0000200;6.02e-13;6!UBERON:0009663;6.06e-13;7!UBERON:0004733;7.24e-12;12!UBERON:0002028;7.24e-12;12!UBERON:0002298;7.59e-11;6!UBERON:0000349;7.72e-11;5!UBERON:0001872;1.84e-10;5!UBERON:0001871;1.85e-10;6!UBERON:0002021;2.21e-10;5!UBERON:0011216;4.35e-10;132!UBERON:0000178;4.41e-09;15!UBERON:0000179;4.41e-09;15!UBERON:0000463;4.41e-09;15!UBERON:0003296;6.19e-09;4!UBERON:0010133;6.19e-09;4!UBERON:0000369;9.02e-09;4!UBERON:0002435;9.02e-09;4!UBERON:0000204;9.02e-09;4!UBERON:0002784;2.29e-08;4!UBERON:0002680;7.61e-08;9!UBERON:0001895;7.61e-08;9!UBERON:0001870;2.04e-07;3!UBERON:0010314;3.42e-07;132!UBERON:0005383;8.06e-07;3!UBERON:0005382;8.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.50e-76,56;UBERON:0005068,1.50e-76,56;UBERON:0006241,1.50e-76,56;UBERON:0007135,1.50e-76,56;UBERON:0001016,2.82e-75,89;UBERON:0001017,5.43e-74,81;UBERON:0000073,7.26e-72,53;UBERON:0002616,7.26e-72,53;UBERON:0000955,5.05e-65,68;UBERON:0006238,5.05e-65,68;UBERON:0002780,3.06e-61,41;UBERON:0001890,3.06e-61,41;UBERON:0003080,3.06e-61,41;UBERON:0006240,3.06e-61,41;UBERON:0002346,1.16e-54,86;UBERON:0007023,3.61e-54,114;UBERON:0003075,6.18e-54,82;UBERON:0007284,6.18e-54,82;UBERON:0001893,6.20e-49,34;UBERON:0003528,1.44e-48,34;UBERON:0002020,1.44e-48,34;UBERON:0001869,5.65e-46,32;UBERON:0002791,2.33e-45,32;UBERON:0010371,2.09e-44,104;UBERON:0003056,6.02e-44,61;UBERON:0004121,1.95e-39,171;UBERON:0000924,1.95e-39,171;UBERON:0006601,1.95e-39,171;UBERON:0002619,2.74e-39,22;UBERON:0001950,1.22e-35,20;UBERON:0000956,6.65e-34,25;UBERON:0000203,6.65e-34,25;UBERON:0010314,8.83e-33,132;UBERON:0011216,5.76e-30,223;UBERON:0000025,2.02e-17,192;UBERON:0002420,1.46e-16,9;UBERON:0007245,1.46e-16,9;UBERON:0010009,1.46e-16,9;UBERON:0010011,1.46e-16,9;UBERON:0000454,1.46e-16,9;UBERON:0000125,5.11e-16,9;UBERON:0002308,5.11e-16,9;UBERON:0003076,5.38e-16,15;UBERON:0003057,5.38e-16,15;UBERON:0001894,1.62e-13,7;UBERON:0006222,1.62e-13,7;UBERON:0004732,2.37e-13,13;UBERON:0000200,6.02e-13,6;UBERON:0009663,6.41e-13,7;UBERON:0004733,7.54e-12,12;UBERON:0002028,7.54e-12,12;UBERON:0007277,7.54e-12,12;UBERON:0004111,1.59e-11,240;UBERON:0000349,7.28e-11,5;UBERON:0002298,7.95e-11,6;UBERON:0001872,1.70e-10,5;UBERON:0001871,1.79e-10,6;UBERON:0002021,2.28e-10,5;UBERON:0000483,2.08e-09,306;UBERON:0000119,3.63e-09,309;UBERON:0000178,4.39e-09,15;UBERON:0000179,4.39e-09,15;UBERON:0000463,4.39e-09,15;UBERON:0000922,5.59e-09,592;UBERON:0003296,6.19e-09,4;UBERON:0010133,6.19e-09,4;UBERON:0000369,8.85e-09,4;UBERON:0002435,8.85e-09,4;UBERON:0000204,8.85e-09,4;UBERON:0010082,8.85e-09,4;UBERON:0005423,1.38e-08,581;UBERON:0002784,2.12e-08,4;UBERON:0000923,2.44e-08,560;UBERON:0010316,2.44e-08,560;UBERON:0005291,2.44e-08,560;UBERON:0006598,2.44e-08,560;UBERON:0010317,2.44e-08,560;UBERON:0002532,2.44e-08,560;UBERON:0002050,4.04e-08,564;UBERON:0002680,7.76e-08,9;UBERON:0001895,7.76e-08,9;UBERON:0010092,7.76e-08,9;UBERON:0001870,2.04e-07,3;UBERON:0005383,7.98e-07,3;UBERON:0005382,7.98e-07,3 | |||
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|short_description=p2@RUNDC3A | |||
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Latest revision as of 20:46, 24 September 2015
Short description: | p2@RUNDC3A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RUNDC3A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 34bp_to_ENST00000225441_5end |
EntrezGene: | RUNDC3A |
HGNC: | 16984 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data