FFCP PHASE1:Hg19::chr16:74808535..74808614,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:74808535..74808614,- to FFCP PHASE1:Hg19::chr16:74808535..74808614,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79152 | |EntrezGene=79152 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21197 | |HGNC=21197 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=106bp_to_uc010vmy.1_5end | |||
|cluster_id=chr16:74808535..74808614,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_3_at_FA2H_5end | |||
|id=chr16:74808535..74808614,- | |||
|ontology_enrichment_celltype=CL:0000066!3.33e-08!254;CL:1000507!1.58e-07!12;CL:1000494!1.58e-07!12;CL:1000497!3.42e-07!18;CL:0002518!3.42e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000507;5.51e-14;10!CL:1000494;5.51e-14;10!CL:1000449;7.46e-11;15!CL:1000497;2.58e-09;17!CL:0002518;2.58e-09;17!CL:0002681;3.97e-07;12!CL:0002584;3.97e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,6.81e-14,10;CL:1000494,6.81e-14,10;CL:1000449,8.97e-11,15;CL:1000497,3.02e-09,17;CL:0002518,3.02e-09,17;CL:0002681,4.81e-07,12;CL:0002584,4.81e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.75e-12;82!UBERON:0006241;1.28e-07;3!UBERON:0003057;1.28e-07;3 | |||
|ontology_enrichment_disease=DOID:305!3.56e-20!106;DOID:0050687!4.79e-14!143;DOID:299!6.55e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;7.13e-36;34!UBERON:0003528;4.07e-35;34!UBERON:0002020;4.07e-35;34!UBERON:0002791;2.39e-34;32!UBERON:0001869;2.94e-34;32!UBERON:0002780;2.29e-32;41!UBERON:0001890;2.29e-32;41!UBERON:0002619;2.66e-30;22!UBERON:0000073;6.62e-28;53!UBERON:0002616;6.62e-28;53!UBERON:0001950;6.67e-27;20!UBERON:0000956;4.39e-26;25!UBERON:0000203;4.39e-26;25!UBERON:0001017;9.86e-19;75!UBERON:0000125;3.55e-18;9!UBERON:0002308;3.55e-18;9!UBERON:0002420;3.39e-17;9!UBERON:0007245;3.39e-17;9!UBERON:0010009;3.39e-17;9!UBERON:0010011;3.39e-17;9!UBERON:0000454;3.39e-17;9!UBERON:0000955;3.72e-17;68!UBERON:0009663;2.45e-14;7!UBERON:0004211;5.51e-14;10!UBERON:0009773;5.51e-14;10!UBERON:0001231;5.51e-14;10!UBERON:0004810;5.51e-14;10!UBERON:0001016;7.48e-14;83!UBERON:0002298;3.34e-13;6!UBERON:0000200;6.19e-12;6!UBERON:0007023;9.18e-12;114!UBERON:0006555;7.46e-11;15!UBERON:0004819;7.46e-11;15!UBERON:0001285;7.46e-11;15!UBERON:0007684;7.46e-11;15!UBERON:0011216;2.44e-10;132!UBERON:0000489;6.03e-10;29!UBERON:0000349;7.42e-10;5!UBERON:0004732;1.82e-09;13!UBERON:0001871;1.86e-09;6!UBERON:0005409;1.49e-08;22!UBERON:0000369;2.09e-08;4!UBERON:0002435;2.09e-08;4!UBERON:0000204;2.09e-08;4!UBERON:0004733;7.30e-08;12!UBERON:0002028;7.30e-08;12!UBERON:0002240;1.28e-07;3!UBERON:0005174;1.28e-07;3!UBERON:0001137;1.28e-07;3!UBERON:0000988;1.70e-07;3!UBERON:0004921;2.19e-07;33!UBERON:0001896;2.29e-07;3!UBERON:0005290;2.29e-07;3!UBERON:0002113;3.30e-07;24!UBERON:0011143;3.30e-07;24!UBERON:0001225;3.97e-07;12!UBERON:0008987;3.97e-07;12!UBERON:0001872;5.57e-07;5!UBERON:0002021;6.16e-07;5!UBERON:0001870;7.56e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.89e-57,56;UBERON:0005068,4.89e-57,56;UBERON:0006241,4.89e-57,56;UBERON:0007135,4.89e-57,56;UBERON:0000073,2.49e-51,53;UBERON:0002616,2.49e-51,53;UBERON:0002780,2.96e-45,41;UBERON:0001890,2.96e-45,41;UBERON:0003080,2.96e-45,41;UBERON:0006240,2.96e-45,41;UBERON:0001893,2.42e-42,34;UBERON:0003528,3.13e-42,34;UBERON:0002020,3.13e-42,34;UBERON:0000955,3.37e-41,68;UBERON:0006238,3.37e-41,68;UBERON:0001017,7.04e-41,81;UBERON:0003075,1.40e-40,82;UBERON:0007284,1.40e-40,82;UBERON:0002791,1.72e-38,32;UBERON:0001869,2.08e-38,32;UBERON:0002346,4.83e-38,86;UBERON:0001016,1.69e-37,89;UBERON:0007023,8.86e-36,114;UBERON:0003056,4.48e-33,61;UBERON:0010371,5.31e-32,104;UBERON:0002619,1.47e-30,22;UBERON:0001950,3.38e-27,20;UBERON:0000956,2.62e-26,25;UBERON:0000203,2.62e-26,25;UBERON:0011216,7.12e-24,223;UBERON:0000025,2.26e-21,192;UBERON:0010314,2.78e-21,132;UBERON:0004121,3.00e-18,171;UBERON:0000924,3.00e-18,171;UBERON:0006601,3.00e-18,171;UBERON:0000125,3.88e-18,9;UBERON:0002308,3.88e-18,9;UBERON:0002420,2.29e-17,9;UBERON:0007245,2.29e-17,9;UBERON:0010009,2.29e-17,9;UBERON:0010011,2.29e-17,9;UBERON:0000454,2.29e-17,9;UBERON:0004111,8.56e-17,240;UBERON:0009663,2.56e-14,7;UBERON:0004810,6.81e-14,10;UBERON:0000483,2.28e-13,306;UBERON:0002298,3.53e-13,6;UBERON:0000119,4.59e-13,309;UBERON:0003076,1.16e-12,15;UBERON:0003057,1.16e-12,15;UBERON:0000200,5.43e-12,6;UBERON:0004211,8.97e-11,15;UBERON:0009773,8.97e-11,15;UBERON:0001231,8.97e-11,15;UBERON:0001285,8.97e-11,15;UBERON:0007684,8.97e-11,15;UBERON:0004208,8.97e-11,15;UBERON:0000349,5.43e-10,5;UBERON:0006555,5.82e-10,16;UBERON:0004819,5.82e-10,16;UBERON:0001871,1.18e-09,6;UBERON:0004732,2.09e-09,13;UBERON:0000489,5.53e-09,31;UBERON:0000369,2.05e-08,4;UBERON:0002435,2.05e-08,4;UBERON:0000204,2.05e-08,4;UBERON:0010082,2.05e-08,4;UBERON:0004733,8.24e-08,12;UBERON:0002028,8.24e-08,12;UBERON:0007277,8.24e-08,12;UBERON:0002240,1.25e-07,3;UBERON:0005174,1.25e-07,3;UBERON:0001137,1.25e-07,3;UBERON:0000988,1.79e-07,3;UBERON:0005409,1.91e-07,25;UBERON:0001896,2.30e-07,3;UBERON:0005290,2.30e-07,3;UBERON:0010096,2.30e-07,3;UBERON:0001225,4.81e-07,12;UBERON:0008987,4.81e-07,12;UBERON:0001872,5.13e-07,5;UBERON:0002021,5.80e-07,5;UBERON:0001870,7.28e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,4.18680700783456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763188581434,0.662648841607426,0.929551542956147,0.518305275076852,0.756962552626885,0.72995471815166,0,0,0,0,0,0.118306800039844,0.168584690078102,0.241011029883482,0.55146986366197,0.435758888184812,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,3.07471096357784,0,0,1.1240175325762,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41718899183244,0,0,0,0,0,6.76799419361118,4.31285887784723,6.27479815341484,1.46139224653261,1.68882606228601,0,0,0,0,1.08378575017541,2.00675909541941,7.64628819135115,5.81753206250107,0.671624264166535,0,0,1.79515087581472,0.656029291399411,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.980160863924127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86565405061372,0,0,0,0,0.47748896947538,0,0,1.9882952955326,3.93874365949436,0,0,0.211125408127993,0,0.828851746593443,1.0077309914171,0.102268682502155,0,0,0.808815160325942,3.58042349351218,0,0.295930216910801,0,0,7.75466196876175,9.83341840515623,0,1.30213880542617,2.53633999988968,0,0.227586896570999,1.77977555204936,0.709163045303809,0.344743373241465,0,0.173624994933292,3.54296554325536,4.5826646677655,0,1.10579259931225,0.886642856860642,2.63262476584767,0,0.139423744278603,0.230850775511391,0,0.46112780877612,0.269272933229316,0.434589487688032,0.957003479195758,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,3.58696709697646,0.326465616318295,7.49171278599886,0.865554558968364,2.98578579323551,0.796118080530053,1.22206028986725,0,0.123563938946503,0,36.0596061446622,1.60515529459758,19.6782134409285,0,2.34797542718508,0,1.18375320854817,2.41981432097328,0,0.379119477770928,0,0.518440956986236,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0.34945333648406,0,4.16052224543066,3.36210858596454,3.28461828212837,0.484945082442097,0,0.225980740780532,0,0,8.04047108639659,0.391102765469606,0.64127056201227,1.06726497369676,0,1.44090417154106,0.114536596165916,0,1.7286575758578,0.248505071130865,2.35694034616795,0,0.104602846312333,0,0,16.2113477951643,11.2262410691434,0,0,0,0,0.229160424011684,0,0.998395002494955,0,0,0.201550417460179,0,0,0,0,0.13480708770837,0.492137407573744,0,3.18091875923721,8.03600096058296,0.321506296930038,0.412618309791701,0,0,0,6.80395034569876,0.335434687599266,1.02447419488958,0.734364233889974,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,1.19730191562487,0,0,0.113312091520126,0,0,13.1868615488782,9.38851472373099,9.58086292152245,0,0.320362237703084,0.157204305099666,0,0,0,0.365377795142688,0,0,0,0,0,0.942324577501406,3.54427271986794,2.68457782784319,6.38473746603149,7.45431954397093,8.87432412294818,21.4853554177187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0.260994291965212,0,0,0,0,1.54400723580486,0.438568099157414,0,0.192914038270915,0.168942440653073,1.02496607435179,0,0,5.94511275452442,0,0,0,0,0,1.69049698686902,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.76284221466185,2.8339315265117,6.2257205032289,11.2814000332415,0,9.88948710238316,12.5951003592844,21.4154130388732,0.196295437002051,0.11796972334774,0,0,0,0,0,0.0752103283492573,0,2.34454203369928,0,0.163771917510097,1.77427303460454,10.4683256158512,4.68646859168308,4.75379631952723,11.3514300247093,0,1.64477330057155,0.496211178389294,0,1.02209942111676,1.07140367175657,0.336283722218824,0,0.455324382702595,0.0887023701626388,0,0,14.8174017889493,7.56386895972764,0.945550727071746,0.556157009460346,0.078493092850514,3.45654297815204,0.280272163313789,1.82631744101899,0.431855182437243,0.9555033757741,0.285906176706625,0,0,0,0,0,0,0,1.72090943528111,0,0,0.423387050190929,0.68732060563215,0,0,0.111855431797792,1.96300467230486,3.65753774946808,0,0,0,0,4.44484980578001,0,0,0,0,1.05673990496671,1.92935395269862,1.74847648403166,0.940634592723046,0.490296643507811,0.235676547101626,16.6862197047703,11.2877632124293,17.7515405585028,0,0,0.0644578879735772,0,0.178553938605658,0,3.2898960342559,7.30336388246517,0.9174585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| ||
|short_description=p3@FA2H | |||
}} | }} |
Latest revision as of 20:56, 17 September 2015
Short description: | p3@FA2H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FA2H_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 106bp_to_uc010vmy.1_5end |
EntrezGene: | FA2H |
HGNC: | 21197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 6.81e-14 | 10 |
nephron tubule epithelial cell | 6.81e-14 | 10 |
epithelial cell of nephron | 8.97e-11 | 15 |
kidney cell | 3.02e-09 | 17 |
kidney epithelial cell | 3.02e-09 | 17 |
kidney cortical cell | 4.81e-07 | 12 |
renal cortical epithelial cell | 4.81e-07 | 12 |