FFCP PHASE1:Hg19::chr16:68867668..68867683,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:68867668..68867683,+ | |||
|coexpression_cluster_id=C2385 | |||
|description=CAGE_peak_at_chr16:68867668..68867683,+ | |||
|id=chr16:68867668..68867683,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.08e-17!254;CL:0002076!4.22e-16!43;CL:0000039!2.17e-14!7;CL:0000586!2.17e-14!7;CL:0000223!4.77e-14!59;CL:0002251!6.88e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0000039;6.84e-11;7!CL:0000586;6.84e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.76e-11,7;CL:0000586,9.76e-11,7;CL:0000066,4.41e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.05e-27!106;DOID:1749!4.83e-22!14;DOID:0050687!4.71e-21!143;DOID:162!1.47e-11!235;DOID:14566!4.99e-11!239;DOID:299!2.37e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.02e-14;14!DOID:1799;1.21e-09;1!DOID:10165;1.21e-09;1!DOID:1798;1.21e-09;1!DOID:0050619;1.62e-09;1!DOID:3111;1.62e-09;1!DOID:1357;1.62e-09;1!DOID:3603;1.62e-09;1!DOID:299;7.00e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.92e-19,106;DOID:0050687,6.31e-17,143;DOID:1749,2.30e-14,14;DOID:162,8.32e-13,235;DOID:14566,1.84e-12,239;DOID:1799,1.21e-09,1;DOID:10165,1.21e-09,1;DOID:1798,1.21e-09,1;DOID:0050619,1.69e-09,1;DOID:1357,1.69e-09,1;DOID:3111,1.84e-09,1;DOID:3603,1.84e-09,1;DOID:299,7.32e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.18e-17!169;UBERON:0000925!5.18e-17!169;UBERON:0006595!5.18e-17!169;UBERON:0001007!7.16e-15!155;UBERON:0001555!7.16e-15!155;UBERON:0007026!7.16e-15!155;UBERON:0004921!2.51e-12!129;UBERON:0004185!2.51e-12!129;UBERON:0005911!4.90e-10!82;UBERON:0005409!3.65e-09!35;UBERON:0000344!4.39e-09!12;UBERON:0005156!5.74e-09!59;UBERON:0000990!5.74e-09!59;UBERON:0000077!4.12e-08!130;UBERON:0000160!4.59e-08!27;UBERON:0005153!7.25e-08!37;UBERON:0002294!2.29e-07!7;UBERON:0001173!2.29e-07!7;UBERON:0004912!2.29e-07!7;UBERON:0003343!2.59e-07!4;UBERON:0004785!2.59e-07!4;UBERON:0003929!4.60e-07!54;UBERON:0000161!5.33e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;1.21e-09;1!UBERON:0005056;1.21e-09;1!UBERON:0004176;1.21e-09;1!UBERON:0001764;1.62e-09;1!UBERON:0001825;1.62e-09;1!UBERON:0004913;3.39e-09;1!UBERON:0003703;3.39e-09;1!UBERON:0001174;3.39e-09;1!UBERON:0004914;3.39e-09;1!UBERON:0002394;5.97e-09;4!UBERON:0003928;5.97e-09;4!UBERON:0001052;8.54e-09;4!UBERON:0004907;3.34e-07;5!UBERON:0000160;3.59e-07;17!UBERON:0000059;5.74e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,1.32e-09,1;UBERON:0005056,1.32e-09,1;UBERON:0001764,1.69e-09,1;UBERON:0001825,1.69e-09,1;UBERON:0004913,5.28e-09,1;UBERON:0003703,5.28e-09,1;UBERON:0001174,5.28e-09,1;UBERON:0004914,5.28e-09,1;UBERON:0001052,7.58e-09,4;UBERON:0004907,3.04e-07,5;UBERON:0000160,3.84e-07,17;UBERON:0000059,5.57e-07,11 | |||
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| ||
|short_description=p@chr16:68867668..68867683,+ | |||
}} | }} |
Latest revision as of 11:47, 25 July 2015
Short description: | p@chr16:68867668..68867683, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:68867668..68867683, + |
Coexpression cluster: | C2385_breast_choriocarcinoma_squamous_pancreatic_malignant_mesothelioma_bronchioalveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.76e-11 | 7 |
germ cell | 9.76e-11 | 7 |
epithelial cell | 4.41e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 1.32e-09 | 1 |
external female genitalia | 1.32e-09 | 1 |
maxillary sinus | 1.69e-09 | 1 |
paranasal sinus | 1.69e-09 | 1 |
hepatopancreatic ampulla | 5.28e-09 | 1 |
extrahepatic bile duct | 5.28e-09 | 1 |
common bile duct | 5.28e-09 | 1 |
duodenal papilla | 5.28e-09 | 1 |
rectum | 7.58e-09 | 4 |
lower digestive tract | 3.04e-07 | 5 |
intestine | 3.84e-07 | 17 |
large intestine | 5.57e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.92e-19 | 106 |
cell type cancer | 6.31e-17 | 143 |
squamous cell carcinoma | 2.30e-14 | 14 |
cancer | 8.32e-13 | 235 |
disease of cellular proliferation | 1.84e-12 | 239 |
islet cell tumor | 1.21e-09 | 1 |
endocrine pancreas cancer | 1.21e-09 | 1 |
pancreatic endocrine carcinoma | 1.21e-09 | 1 |
paranasal sinus cancer | 1.69e-09 | 1 |
maxillary sinus cancer | 1.69e-09 | 1 |
cystadenocarcinoma | 1.84e-09 | 1 |
mucinous cystadenocarcinoma | 1.84e-09 | 1 |
adenocarcinoma | 7.32e-08 | 25 |