FFCP PHASE1:Hg19::chr14:98632482..98632507,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:98632482..98632507,- | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_at_chr14:98632482..98632507,- | |||
|id=chr14:98632482..98632507,- | |||
|ontology_enrichment_celltype=CL:0000625!6.72e-35!11;CL:0000791!4.57e-21!18;CL:0000789!4.57e-21!18;CL:0002420!4.57e-21!18;CL:0002419!4.57e-21!18;CL:0000790!4.57e-21!18;CL:0000084!1.35e-19!25;CL:0000827!1.35e-19!25;CL:0000838!9.53e-14!52;CL:0000542!1.85e-13!53;CL:0000051!1.85e-13!53;CL:0000842!1.77e-11!3;CL:0000224!7.89e-09!4;CL:0002087!1.78e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000625;6.61e-09;11!CL:0000084;1.37e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.35e-09,11;CL:0000084,1.34e-08,25;CL:0000827,1.34e-08,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.41e-11!7;UBERON:0002370!2.35e-09!4;UBERON:0005058!2.35e-09!4;UBERON:0009113!2.35e-09!4;UBERON:0003295!2.35e-09!4;UBERON:0005562!2.35e-09!4;UBERON:0002372!4.15e-09!1;UBERON:0001961!4.15e-09!1;UBERON:0001744!4.15e-09!1;UBERON:0001735!4.15e-09!1;UBERON:0000974!4.30e-08!10;UBERON:0001042!6.44e-08!10;UBERON:0009145!6.44e-08!10;UBERON:0006562!3.08e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.19e-45;2!UBERON:0005058;3.19e-45;2!UBERON:0009113;3.19e-45;2!UBERON:0004177;2.08e-40;5!UBERON:0005057;2.08e-40;5!UBERON:0000341;2.19e-12;2!UBERON:0002106;1.08e-08;3!UBERON:0002114;1.35e-08;2!UBERON:0000077;4.59e-08;27!UBERON:0002405;4.59e-08;27!UBERON:0000922;9.16e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.23e-29,7;UBERON:0005057,4.23e-29,7;UBERON:0002370,3.29e-23,4;UBERON:0005058,3.29e-23,4;UBERON:0009113,3.29e-23,4;UBERON:0003295,3.29e-23,4;UBERON:0005562,3.29e-23,4;UBERON:0000974,1.20e-20,10;UBERON:0003351,7.79e-16,6;UBERON:0000341,2.07e-12,2;UBERON:0003408,6.78e-10,10;UBERON:0001042,6.78e-10,10;UBERON:0009145,6.78e-10,10;UBERON:0006562,4.43e-09,11;UBERON:0009722,4.43e-09,11;UBERON:0007690,4.43e-09,11;UBERON:0002106,1.12e-08,3;UBERON:0004854,1.12e-08,3;UBERON:0009034,1.12e-08,3;UBERON:0002095,1.12e-08,3;UBERON:0004782,1.12e-08,3;UBERON:0003281,1.12e-08,3;UBERON:0009664,1.12e-08,3;UBERON:0002296,1.12e-08,3;UBERON:0005602,1.12e-08,3;UBERON:0001179,1.12e-08,3;UBERON:0006293,1.12e-08,3;UBERON:0002114,1.51e-08,2;UBERON:0000077,1.52e-07,29 | |||
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|short_description=p@chr14:98632482..98632507,- | |||
}} | }} |
Latest revision as of 00:11, 25 July 2015
Short description: | p@chr14:98632482..98632507, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:98632482..98632507, - |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 6.35e-09 | 11 |
T cell | 1.34e-08 | 25 |
pro-T cell | 1.34e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 4.23e-29 | 7 |
immune organ | 4.23e-29 | 7 |
thymus | 3.29e-23 | 4 |
hemolymphoid system gland | 3.29e-23 | 4 |
thymic region | 3.29e-23 | 4 |
pharyngeal gland | 3.29e-23 | 4 |
thymus primordium | 3.29e-23 | 4 |
neck | 1.20e-20 | 10 |
pharyngeal epithelium | 7.79e-16 | 6 |
throat | 2.07e-12 | 2 |
gland of gut | 6.78e-10 | 10 |
chordate pharynx | 6.78e-10 | 10 |
pharyngeal region of foregut | 6.78e-10 | 10 |
pharynx | 4.43e-09 | 11 |
entire pharyngeal arch endoderm | 4.43e-09 | 11 |
early pharyngeal endoderm | 4.43e-09 | 11 |
spleen | 1.12e-08 | 3 |
gastrointestinal system mesentery | 1.12e-08 | 3 |
stomach region | 1.12e-08 | 3 |
mesentery | 1.12e-08 | 3 |
gastrointestinal system serosa | 1.12e-08 | 3 |
mesentery of stomach | 1.12e-08 | 3 |
gut mesentery | 1.12e-08 | 3 |
dorsal mesentery | 1.12e-08 | 3 |
dorsal mesogastrium | 1.12e-08 | 3 |
peritoneal cavity | 1.12e-08 | 3 |
spleen primordium | 1.12e-08 | 3 |
duodenum | 1.51e-08 | 2 |
mixed endoderm/mesoderm-derived structure | 1.52e-07 | 29 |