FFCP PHASE1:Hg19::chr14:57277098..57277116,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5015 | |EntrezGene=5015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8522 | |HGNC=8522 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_uc010aou.2_5end | |||
|cluster_id=chr14:57277098..57277116,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_3_at_OTX2_5end | |||
|id=chr14:57277098..57277116,- | |||
|ontology_enrichment_celltype=CL:0002322!3.41e-20!5;CL:0002586!4.81e-14!3;CL:0000149!1.22e-10!4;CL:0000147!1.63e-10!14;CL:0000128!1.55e-09!7;CL:0000126!1.55e-09!7;CL:0000127!1.55e-09!7;CL:0002453!1.55e-09!7;CL:0002549!2.14e-09!2;CL:0002319!1.21e-08!25;CL:0000243!2.05e-08!15;CL:0000125!2.05e-08!15;CL:0000030!2.05e-08!15;CL:0000339!2.05e-08!15;CL:0000333!7.08e-08!41;CL:0000095!1.85e-07!17;CL:0000123!1.85e-07!17;CL:0000133!2.51e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002586;1.05e-30;3!CL:0000149;3.29e-23;4!CL:0000147;1.12e-11;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.00e-30,3;CL:0000149,3.17e-23,4;CL:0000147,1.10e-11,14 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.08e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;3.67e-08;11!DOID:3095;2.51e-07;22!DOID:2994;2.51e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.86e-08,11;DOID:3095,2.55e-07,22;DOID:2994,2.55e-07,22 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000966;2.10e-50;5!UBERON:0005388;2.10e-50;5!UBERON:0001802;2.10e-50;5!UBERON:0001781;1.05e-30;3!UBERON:0001782;1.05e-30;3!UBERON:0001905;1.12e-21;2!UBERON:0002757;1.12e-21;2!UBERON:0010134;1.12e-21;2!UBERON:0005408;1.12e-21;2!UBERON:0001899;1.12e-21;2!UBERON:0000970;8.66e-18;20!UBERON:0002104;6.34e-17;21!UBERON:0000020;2.02e-15;23!UBERON:0001032;9.20e-15;24!UBERON:0004456;9.20e-15;24!UBERON:0001896;3.50e-14;3!UBERON:0005290;3.50e-14;3!UBERON:0000019;2.92e-13;19!UBERON:0000047;2.92e-13;19!UBERON:0004088;2.92e-13;19!UBERON:0010230;2.92e-13;19!UBERON:0001456;5.48e-12;21!UBERON:0003296;2.55e-11;4!UBERON:0010133;2.55e-11;4!UBERON:0002784;2.55e-11;4!UBERON:0007625;8.31e-09;11!UBERON:0004733;6.05e-08;12!UBERON:0002028;6.05e-08;12!UBERON:0002298;1.55e-07;6!UBERON:0004732;2.27e-07;13!UBERON:0001894;7.90e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.82e-42,6;UBERON:0005388,4.82e-42,6;UBERON:0001802,4.82e-42,6;UBERON:0001782,1.00e-30,3;UBERON:0005424,1.00e-30,3;UBERON:0001781,3.17e-23,4;UBERON:0001905,1.12e-21,2;UBERON:0002757,1.12e-21,2;UBERON:0010134,1.12e-21,2;UBERON:0005408,1.12e-21,2;UBERON:0001899,1.12e-21,2;UBERON:0000970,6.25e-17,21;UBERON:0002104,6.25e-17,21;UBERON:0000020,9.09e-15,24;UBERON:0001032,9.09e-15,24;UBERON:0004456,9.09e-15,24;UBERON:0001896,2.96e-14,3;UBERON:0005290,2.96e-14,3;UBERON:0010096,2.96e-14,3;UBERON:0000019,1.34e-12,20;UBERON:0000047,1.34e-12,20;UBERON:0010312,1.34e-12,20;UBERON:0004088,1.34e-12,20;UBERON:0010230,1.34e-12,20;UBERON:0003072,1.34e-12,20;UBERON:0004128,1.34e-12,20;UBERON:0003071,1.34e-12,20;UBERON:0002346,2.38e-12,86;UBERON:0001456,1.92e-11,22;UBERON:0003296,2.55e-11,4;UBERON:0010133,2.55e-11,4;UBERON:0002784,2.55e-11,4;UBERON:0003075,1.03e-10,82;UBERON:0007284,1.03e-10,82;UBERON:0004121,4.20e-09,171;UBERON:0000924,4.20e-09,171;UBERON:0006601,4.20e-09,171;UBERON:0007625,8.20e-09,11;UBERON:0000955,3.02e-08,68;UBERON:0006238,3.02e-08,68;UBERON:0010371,3.64e-08,104;UBERON:0005085,4.45e-08,31;UBERON:0004733,5.83e-08,12;UBERON:0002028,5.83e-08,12;UBERON:0007277,5.83e-08,12;UBERON:0001016,1.31e-07,89;UBERON:0002298,1.43e-07,6;UBERON:0004732,2.19e-07,13;UBERON:0003056,2.33e-07,61;UBERON:0001894,7.90e-07,7;UBERON:0006222,7.90e-07,7;UBERON:0001017,8.43e-07,81 | |||
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| ||
|short_description=p3@OTX2 | |||
}} | }} |
Latest revision as of 17:45, 24 September 2015
Short description: | p3@OTX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_OTX2_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -1bp_to_uc010aou.2_5end |
EntrezGene: | OTX2 |
HGNC: | 8522 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.00e-30 | 3 |
visual pigment cell | 3.17e-23 | 4 |
pigment cell | 1.10e-11 | 14 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.86e-08 | 11 |
germ cell and embryonal cancer | 2.55e-07 | 22 |
germ cell cancer | 2.55e-07 | 22 |