FFCP PHASE1:Hg19::chr13:23367690..23367696,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:23367690..23367696,+ | |||
|coexpression_cluster_id=C112 | |||
|description=CAGE_peak_at_chr13:23367690..23367696,+ | |||
|id=chr13:23367690..23367696,+ | |||
|ontology_enrichment_celltype=CL:0000322!2.42e-14!3;CL:0000223!8.04e-10!59;CL:0000181!6.42e-08!12;CL:0000417!6.42e-08!12;CL:0000668!6.42e-08!12;CL:0000414!6.42e-08!12;CL:0000412!6.42e-08!12;CL:0000182!6.42e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0002178;1.19e-09;3!CL:0000322;1.67e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.19e-09,3;CL:0000322,1.67e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;4.65e-08;30 | |||
|ontology_enrichment_disease=DOID:3910!5.20e-21!2;DOID:305!7.11e-14!106;DOID:1325!1.40e-13!7;DOID:3904!1.40e-13!7;DOID:3119!5.93e-12!14;DOID:3371!9.57e-12!1;DOID:4549!9.57e-12!1;DOID:5861!9.57e-12!1;DOID:6496!9.57e-12!1;DOID:0050687!1.60e-11!143;DOID:0050619!3.28e-11!1;DOID:1357!3.28e-11!1;DOID:3905!1.10e-10!9;DOID:0050615!2.86e-10!16;DOID:162!1.03e-09!235;DOID:14566!1.86e-09!239;DOID:3908!5.72e-09!5;DOID:0050686!1.07e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:3371;2.78e-26;1!DOID:4549;2.78e-26;1!DOID:5861;2.78e-26;1!DOID:6496;2.78e-26;1!DOID:3119;9.68e-17;14!DOID:1325;4.69e-15;7!DOID:3904;4.69e-15;7!DOID:3493;8.28e-14;2!DOID:4929;9.40e-14;2!DOID:3910;1.37e-13;2!DOID:3905;6.16e-12;9!DOID:1324;1.54e-07;15!DOID:5409;1.69e-07;4!DOID:0050615;4.02e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.78e-26,1;DOID:4549,2.78e-26,1;DOID:5861,2.78e-26,1;DOID:6496,2.78e-26,1;DOID:3119,9.68e-17,14;DOID:1325,4.69e-15,7;DOID:3904,4.69e-15,7;DOID:3493,8.28e-14,2;DOID:4929,9.40e-14,2;DOID:3910,1.37e-13,2;DOID:3905,6.16e-12,9;DOID:1324,1.54e-07,15;DOID:5409,1.69e-07,4;DOID:0050615,4.02e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0004903!5.20e-21!2;UBERON:0002173!5.20e-21!2;UBERON:0002186!5.20e-21!2;UBERON:0007499!9.66e-19!25;UBERON:0009856!5.36e-18!26;UBERON:0004821!2.42e-14!3;UBERON:0003215!2.42e-14!3;UBERON:0002299!2.42e-14!3;UBERON:0006524!2.42e-14!3;UBERON:0008874!2.42e-14!3;UBERON:0002169!2.42e-14!3;UBERON:0004894!2.42e-14!3;UBERON:0009497!8.47e-14!25;UBERON:0000015!8.47e-14!25;UBERON:0002423!8.47e-14!25;UBERON:0006235!8.47e-14!25;UBERON:0004161!8.47e-14!25;UBERON:0002294!2.34e-13!7;UBERON:0001173!2.34e-13!7;UBERON:0004912!2.34e-13!7;UBERON:0004913!1.18e-11!1;UBERON:0003703!1.18e-11!1;UBERON:0001174!1.18e-11!1;UBERON:0004914!1.18e-11!1;UBERON:0001764!3.28e-11!1;UBERON:0001825!3.28e-11!1;UBERON:0008835!3.80e-11!22;UBERON:0003894!3.80e-11!22;UBERON:0002394!5.44e-11!4;UBERON:0003928!5.44e-11!4;UBERON:0005911!1.17e-10!82;UBERON:0009854!1.17e-10!23;UBERON:0004921!3.09e-09!129;UBERON:0004185!3.09e-09!129;UBERON:0000077!3.15e-09!130;UBERON:0001041!8.45e-09!98;UBERON:0001007!8.68e-09!155;UBERON:0001555!8.68e-09!155;UBERON:0007026!8.68e-09!155;UBERON:0003929!2.96e-08!54;UBERON:0000060!4.92e-08!12;UBERON:0004119!6.79e-08!169;UBERON:0000925!6.79e-08!169;UBERON:0006595!6.79e-08!169;UBERON:0005409!6.15e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;4.61e-26;1!UBERON:0003703;4.61e-26;1!UBERON:0001174;4.61e-26;1!UBERON:0004914;4.61e-26;1!UBERON:0005795;9.79e-26;1!UBERON:0000945;5.44e-21;5!UBERON:0010039;5.44e-21;5!UBERON:0004903;1.37e-13;2!UBERON:0002173;1.37e-13;2!UBERON:0002186;1.37e-13;2!UBERON:0000058;7.30e-11;10!UBERON:0005409;1.81e-10;22!UBERON:0002418;1.10e-09;3!UBERON:0004755;1.10e-09;3!UBERON:0002114;1.30e-09;2!UBERON:0004821;1.67e-09;3!UBERON:0007499;1.67e-09;3!UBERON:0003215;1.67e-09;3!UBERON:0010368;1.67e-09;3!UBERON:0009911;1.67e-09;3!UBERON:0002299;1.67e-09;3!UBERON:0006524;1.67e-09;3!UBERON:0008874;1.67e-09;3!UBERON:0002169;1.67e-09;3!UBERON:0004894;1.67e-09;3!UBERON:0001041;3.90e-08;14!UBERON:0002394;1.59e-07;4!UBERON:0003928;1.59e-07;4!UBERON:0009856;1.92e-07;4!UBERON:0004921;2.20e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,4.61e-26,1;UBERON:0003703,4.61e-26,1;UBERON:0001174,4.61e-26,1;UBERON:0004914,4.61e-26,1;UBERON:0004903,1.37e-13,2;UBERON:0002173,1.37e-13,2;UBERON:0002186,1.37e-13,2;UBERON:0000945,1.61e-13,8;UBERON:0010039,1.61e-13,8;UBERON:0001041,2.36e-10,87;UBERON:0002418,1.10e-09,3;UBERON:0004755,1.10e-09,3;UBERON:0002114,1.30e-09,2;UBERON:0007499,1.52e-09,25;UBERON:0004821,1.67e-09,3;UBERON:0003215,1.67e-09,3;UBERON:0010368,1.67e-09,3;UBERON:0009911,1.67e-09,3;UBERON:0002299,1.67e-09,3;UBERON:0006524,1.67e-09,3;UBERON:0008874,1.67e-09,3;UBERON:0002169,1.67e-09,3;UBERON:0004894,1.67e-09,3;UBERON:0005409,2.45e-09,25;UBERON:0009856,3.35e-09,26;UBERON:0004921,1.41e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,130.61906750342,0,0,0,0,0,0.0801588202515337,0,0,0,175.699138518515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5677673284488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2559434524352,0,0,0,0,0,0,0,0,8.24506398884408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62758471326295,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,130.61906750342,0,0,0,0,0,0.0801588202515337,0,0,0,175.699138518515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5677673284488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2559434524352,0,0,0,0,0,0,0,0,8.24506398884408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62758471326295,0,0,0 | ||
|short_description=p@chr13:23367690..23367696,+ | |||
}} | }} |
Latest revision as of 15:05, 24 July 2015
Short description: | p@chr13:23367690..23367696, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:23367690..23367696, + |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.19e-09 | 3 |
pneumocyte | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 4.61e-26 | 1 |
extrahepatic bile duct | 4.61e-26 | 1 |
common bile duct | 4.61e-26 | 1 |
duodenal papilla | 4.61e-26 | 1 |
bronchoalveolar duct junction | 1.37e-13 | 2 |
alveolar duct | 1.37e-13 | 2 |
bronchiole | 1.37e-13 | 2 |
stomach | 1.61e-13 | 8 |
food storage organ | 1.61e-13 | 8 |
foregut | 2.36e-10 | 87 |
cartilage tissue | 1.10e-09 | 3 |
skeletal tissue | 1.10e-09 | 3 |
duodenum | 1.30e-09 | 2 |
epithelial sac | 1.52e-09 | 25 |
pulmonary alveolus epithelium | 1.67e-09 | 3 |
alveolus | 1.67e-09 | 3 |
pulmonary lobule | 1.67e-09 | 3 |
lobule | 1.67e-09 | 3 |
alveolus of lung | 1.67e-09 | 3 |
alveolar system | 1.67e-09 | 3 |
pulmonary acinus | 1.67e-09 | 3 |
alveolar sac | 1.67e-09 | 3 |
alveolar wall | 1.67e-09 | 3 |
gastrointestinal system | 2.45e-09 | 25 |
sac | 3.35e-09 | 26 |
subdivision of digestive tract | 1.41e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.78e-26 | 1 |
extraosseous chondrosarcoma | 2.78e-26 | 1 |
myxoid chondrosarcoma | 2.78e-26 | 1 |
extraskeletal myxoid chondrosarcoma | 2.78e-26 | 1 |
gastrointestinal system cancer | 9.68e-17 | 14 |
bronchus cancer | 4.69e-15 | 7 |
bronchogenic carcinoma | 4.69e-15 | 7 |
signet ring cell adenocarcinoma | 8.28e-14 | 2 |
tubular adenocarcinoma | 9.40e-14 | 2 |
lung adenocarcinoma | 1.37e-13 | 2 |
lung carcinoma | 6.16e-12 | 9 |
lung cancer | 1.54e-07 | 15 |
lung small cell carcinoma | 1.69e-07 | 4 |
respiratory system cancer | 4.02e-07 | 16 |