FFCP PHASE1:Hg19::chr12:123627611..123627613,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:123627611..123627613,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_at_chr12:123627611..123627613,- | |||
|id=chr12:123627611..123627613,- | |||
|ontology_enrichment_celltype=CL:0000083!7.29e-09!4;CL:0000223!1.66e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1793!7.29e-09!4;DOID:305!1.23e-08!106;DOID:0050687!4.63e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.47e-11!7;UBERON:0005057!1.12e-10!26;UBERON:0004921!1.70e-09!129;UBERON:0004185!1.70e-09!129;UBERON:0002370!2.17e-09!4;UBERON:0005058!2.17e-09!4;UBERON:0009113!2.17e-09!4;UBERON:0003295!2.17e-09!4;UBERON:0005562!2.17e-09!4;UBERON:0001007!9.16e-09!155;UBERON:0001555!9.16e-09!155;UBERON:0007026!9.16e-09!155;UBERON:0000949!5.28e-08!45;UBERON:0001041!5.49e-08!98;UBERON:0000974!5.86e-08!10;UBERON:0004119!8.04e-08!169;UBERON:0000925!8.04e-08!169;UBERON:0006595!8.04e-08!169;UBERON:0005409!1.89e-07!35;UBERON:0001557!4.55e-07!19;UBERON:0000077!9.81e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.68e-99;2!UBERON:0005058;5.68e-99;2!UBERON:0009113;5.68e-99;2!UBERON:0004177;1.81e-40;5!UBERON:0005057;1.81e-40;5!UBERON:0002368;1.04e-11;33!UBERON:0000949;4.03e-09;43!UBERON:0000077;1.98e-08;27!UBERON:0002405;1.98e-08;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.11e-50,4;UBERON:0005058,3.11e-50,4;UBERON:0009113,3.11e-50,4;UBERON:0003295,3.11e-50,4;UBERON:0005562,3.11e-50,4;UBERON:0003351,5.98e-34,6;UBERON:0004177,2.74e-29,7;UBERON:0005057,2.74e-29,7;UBERON:0000974,6.99e-21,10;UBERON:0003408,6.99e-21,10;UBERON:0001042,6.99e-21,10;UBERON:0009145,6.99e-21,10;UBERON:0006562,4.28e-19,11;UBERON:0009722,4.28e-19,11;UBERON:0007690,4.28e-19,11;UBERON:0002368,1.18e-13,35;UBERON:0008814,4.07e-12,18;UBERON:0001557,1.55e-11,19;UBERON:0000949,7.94e-11,45;UBERON:0003929,3.61e-09,54;UBERON:0002530,1.83e-08,59;UBERON:0004807,3.65e-08,28;UBERON:0000077,6.44e-08,29 | |||
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|short_description=p@chr12:123627611..123627613,- | |||
}} | }} |
Latest revision as of 06:13, 24 July 2015
Short description: | p@chr12:123627611..123627613, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:123627611..123627613, - |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.11e-50 | 4 |
hemolymphoid system gland | 3.11e-50 | 4 |
thymic region | 3.11e-50 | 4 |
pharyngeal gland | 3.11e-50 | 4 |
thymus primordium | 3.11e-50 | 4 |
pharyngeal epithelium | 5.98e-34 | 6 |
hemopoietic organ | 2.74e-29 | 7 |
immune organ | 2.74e-29 | 7 |
neck | 6.99e-21 | 10 |
gland of gut | 6.99e-21 | 10 |
chordate pharynx | 6.99e-21 | 10 |
pharyngeal region of foregut | 6.99e-21 | 10 |
pharynx | 4.28e-19 | 11 |
entire pharyngeal arch endoderm | 4.28e-19 | 11 |
early pharyngeal endoderm | 4.28e-19 | 11 |
endocrine gland | 1.18e-13 | 35 |
pharyngeal arch system | 4.07e-12 | 18 |
upper respiratory tract | 1.55e-11 | 19 |
endocrine system | 7.94e-11 | 45 |
gut epithelium | 3.61e-09 | 54 |
gland | 1.83e-08 | 59 |
respiratory system epithelium | 3.65e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.44e-08 | 29 |