FFCP PHASE1:Hg19::chr12:113574028..113574051,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:113574028..113574051,- to FFCP PHASE1:Hg19::chr12:113574028..113574051,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8437 | |EntrezGene=8437 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9873 | |HGNC=9873 | ||
|TSSclassifier=strong | |||
|UniProt=O95294,F8VQX1,Q59H24 | |UniProt=O95294,F8VQX1,Q59H24 | ||
|association_with_transcript=0bp_to_ENST00000261729,ENST00000418411,ENST00000546530,NM_001193520,NM_004658,uc001tun.1_5end | |||
|cluster_id=chr12:113574028..113574051,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_2_at_RASAL1_5end | |||
|id=chr12:113574028..113574051,- | |||
|ontology_enrichment_celltype=CL:0000557!6.81e-17!71;CL:0000839!9.56e-16!70;CL:0002057!2.57e-15!42;CL:0002009!3.55e-14!65;CL:0000860!7.00e-14!45;CL:0002031!3.19e-13!124;CL:0000738!6.19e-13!140;CL:0000766!8.39e-13!76;CL:0000990!2.39e-12!8;CL:0002194!2.71e-12!63;CL:0000576!2.71e-12!63;CL:0000040!2.71e-12!63;CL:0000559!2.71e-12!63;CL:0000763!1.74e-11!112;CL:0000049!1.74e-11!112;CL:0002032!7.07e-10!165;CL:0000837!7.07e-10!165;CL:0000451!8.33e-10!10;CL:0000037!1.12e-09!172;CL:0000566!1.12e-09!172;CL:0002087!2.69e-09!119;CL:0000453!2.96e-09!5;CL:0000988!1.53e-08!182;CL:0000840!4.65e-08!5;CL:0001029!4.65e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000840;8.65e-10;5!CL:0000860;1.54e-08;33!CL:0002057;1.54e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,8.46e-10,5;CL:0001029,8.46e-10,5;CL:0002009,3.42e-08,61;CL:0002194,3.10e-07,59;CL:0000576,3.10e-07,59;CL:0000040,3.10e-07,59;CL:0000559,3.10e-07,59;CL:0000557,3.21e-07,67 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.79e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.16e-51!57;UBERON:0005068!5.16e-51!57;UBERON:0006241!5.16e-51!57;UBERON:0007135!5.16e-51!57;UBERON:0002616!1.45e-41!59;UBERON:0001017!4.92e-40!82;UBERON:0002780!5.91e-40!41;UBERON:0001890!5.91e-40!41;UBERON:0006240!5.91e-40!41;UBERON:0000955!3.06e-39!69;UBERON:0006238!3.06e-39!69;UBERON:0003080!8.89e-39!42;UBERON:0005743!1.59e-37!86;UBERON:0001893!6.12e-37!34;UBERON:0002020!1.04e-36!34;UBERON:0003528!1.04e-36!34;UBERON:0007023!3.46e-35!115;UBERON:0002791!3.51e-35!33;UBERON:0000073!1.73e-34!94;UBERON:0001016!1.73e-34!94;UBERON:0001869!3.05e-33!32;UBERON:0003075!1.31e-32!86;UBERON:0007284!1.31e-32!86;UBERON:0002346!1.47e-30!90;UBERON:0002619!2.01e-28!22;UBERON:0001950!4.02e-28!20;UBERON:0000956!2.01e-24!25;UBERON:0000203!2.01e-24!25;UBERON:0003056!1.03e-23!61;UBERON:0000153!3.20e-18!129;UBERON:0007811!3.20e-18!129;UBERON:0000033!8.97e-18!123;UBERON:0002371!5.12e-14!80;UBERON:0002308!5.58e-14!9;UBERON:0000125!5.58e-14!9;UBERON:0004121!5.65e-14!169;UBERON:0002420!6.61e-14!9;UBERON:0007245!6.61e-14!9;UBERON:0010009!6.61e-14!9;UBERON:0010011!6.61e-14!9;UBERON:0000454!6.61e-14!9;UBERON:0000924!2.38e-13!173;UBERON:0006601!2.38e-13!173;UBERON:0003076!5.83e-13!15;UBERON:0003057!5.83e-13!15;UBERON:0002390!1.69e-12!102;UBERON:0003061!1.69e-12!102;UBERON:0000200!1.80e-12!6;UBERON:0001474!1.90e-12!86;UBERON:0001871!4.55e-12!7;UBERON:0002298!1.20e-11!8;UBERON:0002193!1.46e-10!112;UBERON:0009663!1.59e-10!7;UBERON:0004732!1.80e-10!13;UBERON:0004765!2.51e-10!101;UBERON:0001434!2.51e-10!101;UBERON:0000062!5.24e-10!511;UBERON:0004733!6.41e-09!12;UBERON:0002028!6.41e-09!12;UBERON:0007277!6.41e-09!12;UBERON:0000025!1.19e-08!194;UBERON:0002405!1.44e-08!115;UBERON:0001872!2.80e-07!5;UBERON:0006331!4.04e-07!3;UBERON:0000349!4.60e-07!5;UBERON:0002771!5.02e-07!3;UBERON:0000988!6.61e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.83e-54;34!UBERON:0003528;1.65e-51;34!UBERON:0002020;1.65e-51;34!UBERON:0002791;3.45e-50;32!UBERON:0001869;3.88e-50;32!UBERON:0002780;2.38e-47;41!UBERON:0001890;2.38e-47;41!UBERON:0002619;3.23e-45;22!UBERON:0001950;6.82e-44;20!UBERON:0000073;3.40e-41;53!UBERON:0002616;3.40e-41;53!UBERON:0000956;1.70e-39;25!UBERON:0000203;1.70e-39;25!UBERON:0000125;4.16e-26;9!UBERON:0002308;4.16e-26;9!UBERON:0001017;1.23e-25;75!UBERON:0000955;2.59e-25;68!UBERON:0000200;9.08e-23;6!UBERON:0002420;2.29e-20;9!UBERON:0007245;2.29e-20;9!UBERON:0010009;2.29e-20;9!UBERON:0010011;2.29e-20;9!UBERON:0000454;2.29e-20;9!UBERON:0009663;1.76e-19;7!UBERON:0001016;3.57e-18;83!UBERON:0002298;3.40e-15;6!UBERON:0001871;1.60e-13;6!UBERON:0001872;4.64e-13;5!UBERON:0001870;1.62e-12;3!UBERON:0000988;8.48e-12;3!UBERON:0007023;9.44e-12;114!UBERON:0004732;8.91e-10;13!UBERON:0005162;2.99e-09;2!UBERON:0000122;2.99e-09;2!UBERON:0000369;5.30e-09;4!UBERON:0002435;5.30e-09;4!UBERON:0000204;5.30e-09;4!UBERON:0001875;6.21e-09;2!UBERON:0006514;6.21e-09;2!UBERON:0001897;7.39e-09;2!UBERON:0010225;7.39e-09;2!UBERON:0011216;7.88e-09;132!UBERON:0002702;1.03e-08;2!UBERON:0002771;1.75e-08;2!UBERON:0002148;2.00e-08;2!UBERON:0006331;2.00e-08;2!UBERON:0009662;2.00e-08;2!UBERON:0000349;7.67e-08;5!UBERON:0002021;1.37e-07;5!UBERON:0004733;1.86e-07;12!UBERON:0002028;1.86e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.16e-71,56;UBERON:0005068,9.16e-71,56;UBERON:0006241,9.16e-71,56;UBERON:0007135,9.16e-71,56;UBERON:0000073,1.02e-70,53;UBERON:0002616,1.02e-70,53;UBERON:0002780,1.31e-66,41;UBERON:0001890,1.31e-66,41;UBERON:0003080,1.31e-66,41;UBERON:0006240,1.31e-66,41;UBERON:0001893,6.45e-64,34;UBERON:0003528,1.73e-63,34;UBERON:0002020,1.73e-63,34;UBERON:0000955,6.83e-60,68;UBERON:0006238,6.83e-60,68;UBERON:0002791,5.25e-57,32;UBERON:0001869,7.42e-57,32;UBERON:0001017,3.01e-55,81;UBERON:0001016,4.98e-52,89;UBERON:0003075,4.72e-49,82;UBERON:0007284,4.72e-49,82;UBERON:0002346,2.12e-46,86;UBERON:0003056,3.34e-46,61;UBERON:0002619,2.39e-45,22;UBERON:0001950,4.64e-44,20;UBERON:0000956,1.30e-39,25;UBERON:0000203,1.30e-39,25;UBERON:0007023,5.83e-38,114;UBERON:0010371,5.76e-37,104;UBERON:0010314,2.44e-29,132;UBERON:0000125,3.65e-26,9;UBERON:0002308,3.65e-26,9;UBERON:0004121,3.22e-23,171;UBERON:0000924,3.22e-23,171;UBERON:0006601,3.22e-23,171;UBERON:0000200,8.77e-23,6;UBERON:0002420,2.37e-20,9;UBERON:0007245,2.37e-20,9;UBERON:0010009,2.37e-20,9;UBERON:0010011,2.37e-20,9;UBERON:0000454,2.37e-20,9;UBERON:0009663,2.07e-19,7;UBERON:0011216,6.87e-17,223;UBERON:0002298,2.97e-15,6;UBERON:0000025,5.19e-15,192;UBERON:0001871,1.38e-13,6;UBERON:0001872,4.37e-13,5;UBERON:0001870,1.24e-12,3;UBERON:0000988,5.73e-12,3;UBERON:0004111,2.01e-10,240;UBERON:0004732,8.56e-10,13;UBERON:0005162,3.24e-09,2;UBERON:0000122,3.24e-09,2;UBERON:0000369,6.09e-09,4;UBERON:0002435,6.09e-09,4;UBERON:0000204,6.09e-09,4;UBERON:0010082,6.09e-09,4;UBERON:0001875,6.33e-09,2;UBERON:0006514,6.33e-09,2;UBERON:0001897,6.59e-09,2;UBERON:0010225,6.59e-09,2;UBERON:0002702,8.31e-09,2;UBERON:0002148,1.42e-08,2;UBERON:0006331,1.42e-08,2;UBERON:0009662,1.42e-08,2;UBERON:0002771,1.60e-08,2;UBERON:0000923,2.37e-08,560;UBERON:0010316,2.37e-08,560;UBERON:0005291,2.37e-08,560;UBERON:0006598,2.37e-08,560;UBERON:0010317,2.37e-08,560;UBERON:0002532,2.37e-08,560;UBERON:0003076,3.02e-08,15;UBERON:0003057,3.02e-08,15;UBERON:0002050,3.25e-08,564;UBERON:0000349,7.41e-08,5;UBERON:0005423,1.19e-07,581;UBERON:0002021,1.46e-07,5;UBERON:0004733,1.74e-07,12;UBERON:0002028,1.74e-07,12;UBERON:0007277,1.74e-07,12;UBERON:0000922,2.65e-07,592;UBERON:0000483,3.42e-07,306;UBERON:0000119,4.77e-07,309 | |||
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| ||
|short_description=p2@RASAL1 | |||
}} | }} |
Latest revision as of 12:08, 16 September 2015
Short description: | p2@RASAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RASAL1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000261729, ENST00000418411, ENST00000546530, NM_001193520, NM_004658, uc001tun.1_5end |
EntrezGene: | RASAL1 |
HGNC: | 9873 |
UniProt: | O95294F8VQX1Q59H24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 8.46e-10 | 5 |
common dendritic progenitor | 8.46e-10 | 5 |
macrophage dendritic cell progenitor | 3.42e-08 | 61 |
monopoietic cell | 3.10e-07 | 59 |
monocyte | 3.10e-07 | 59 |
monoblast | 3.10e-07 | 59 |
promonocyte | 3.10e-07 | 59 |
granulocyte monocyte progenitor cell | 3.21e-07 | 67 |