FFCP PHASE1:Hg19::chr11:61583968..61584057,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:61583968..61584057,+ to FFCP PHASE1:Hg19::chr11:61583968..61584057,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9415 | |EntrezGene=9415 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3575 | |HGNC=3575 | ||
|TSSclassifier=strong | |||
|UniProt=E5RHL3 | |UniProt=E5RHL3 | ||
|association_with_transcript=0bp_to_ENST00000517839_5end | |||
|cluster_id=chr11:61583968..61584057,+ | |||
|description=CAGE_peak_5_at_FADS2_5end | |||
|id=chr11:61583968..61584057,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.96e-40!254;CL:0002321!4.60e-25!248;CL:0000220!1.76e-24!246;CL:0000548!8.51e-16!679;CL:0000004!8.51e-16!679;CL:0000255!8.51e-16!679;CL:0000012!9.70e-16!682;CL:0000221!6.77e-12!71;CL:0000076!2.87e-11!62;CL:1000497!4.70e-10!18;CL:0002518!4.70e-10!18;CL:0000003!7.64e-10!722;CL:1000449!4.51e-09!16;CL:0002077!1.75e-08!33;CL:0000222!3.74e-08!119;CL:0000133!1.40e-07!59;CL:0000055!1.70e-07!180;CL:0000144!2.03e-07!625;CL:0002681!2.47e-07!13;CL:0002584!2.47e-07!13;CL:0002368!4.12e-07!13;CL:1000507!4.56e-07!12;CL:1000494!4.56e-07!12;CL:0000213!6.42e-07!57;CL:0000215!6.42e-07!57;CL:0002078!7.24e-07!44;CL:0002159!9.56e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.27e-11;17!CL:0002518;1.27e-11;17!CL:1000449;1.59e-10;15!CL:0002681;1.27e-08;12!CL:0002584;1.27e-08;12!CL:1000507;9.32e-08;10!CL:1000494;9.32e-08;10!CL:0002368;1.54e-07;13!CL:0002077;4.99e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.28e-41,253;CL:0002321,3.52e-24,250;CL:1000497,1.44e-11,17;CL:0002518,1.44e-11,17;CL:0000221,7.08e-11,72;CL:0000076,7.19e-11,63;CL:1000449,1.68e-10,15;CL:0002681,1.37e-08,12;CL:0002584,1.37e-08,12;CL:0000222,2.83e-08,121;CL:0002077,3.55e-08,34;CL:0000213,8.95e-08,58;CL:0000215,8.95e-08,58;CL:1000507,9.08e-08,10;CL:1000494,9.08e-08,10;CL:0002368,1.29e-07,13;CL:0002078,1.58e-07,45;CL:0000133,6.64e-07,59;CL:0000115,7.26e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.73e-09!143;DOID:305!2.00e-09!106;DOID:162!5.03e-08!235;DOID:14566!7.91e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.77e-09,106;DOID:0050687,2.53e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000483!3.00e-11!309;UBERON:0000119!3.85e-11!312;UBERON:0002100!2.26e-10!216;UBERON:0001048!4.93e-10!168;UBERON:0000475!1.01e-09!365;UBERON:0005085!2.08e-09!29;UBERON:0000481!2.71e-09!347;UBERON:0006554!4.35e-09!44;UBERON:0003104!4.39e-09!238;UBERON:0009142!4.39e-09!238;UBERON:0004211!4.51e-09!16;UBERON:0001285!4.51e-09!16;UBERON:0007684!4.51e-09!16;UBERON:0003220!4.51e-09!16;UBERON:0004208!4.51e-09!16;UBERON:0009569!8.37e-09!113;UBERON:0005177!1.29e-08!107;UBERON:0002113!1.44e-08!27;UBERON:0003918!1.44e-08!27;UBERON:0005095!1.44e-08!27;UBERON:0007687!1.44e-08!27;UBERON:0001008!2.20e-08!45;UBERON:0000063!3.23e-08!97;UBERON:0001851!3.27e-08!16;UBERON:0006555!4.05e-08!17;UBERON:0005103!4.05e-08!17;UBERON:0000083!4.05e-08!17;UBERON:0009201!4.05e-08!17;UBERON:0004819!4.05e-08!17;UBERON:0006553!4.05e-08!17;UBERON:0003074!4.05e-08!17;UBERON:0003060!4.05e-08!17;UBERON:0000080!6.12e-08!18;UBERON:0002120!6.12e-08!18;UBERON:0004875!6.12e-08!18;UBERON:0005721!6.12e-08!18;UBERON:0005754!6.12e-08!18;UBERON:0007297!6.12e-08!18;UBERON:0000064!9.14e-08!219;UBERON:0001737!1.83e-07!9;UBERON:0008947!2.01e-07!38;UBERON:0003258!2.01e-07!38;UBERON:0000353!2.01e-07!17;UBERON:0000058!2.46e-07!26;UBERON:0001225!2.47e-07!13;UBERON:0008987!2.47e-07!13;UBERON:0005256!3.26e-07!143;UBERON:0009773!4.56e-07!12;UBERON:0001231!4.56e-07!12;UBERON:0004810!4.56e-07!12;UBERON:0000065!6.66e-07!53;UBERON:0000489!7.72e-07!32;UBERON:0003914!8.49e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;5.33e-12;30!UBERON:0001008;5.33e-12;30!UBERON:0006555;1.59e-10;15!UBERON:0004819;1.59e-10;15!UBERON:0001285;1.59e-10;15!UBERON:0007684;1.59e-10;15!UBERON:0002113;3.56e-10;24!UBERON:0011143;3.56e-10;24!UBERON:0001851;1.88e-09;15!UBERON:0001225;1.27e-08;12!UBERON:0008987;1.27e-08;12!UBERON:0000353;2.80e-08;15!UBERON:0001737;4.47e-08;9!UBERON:0001557;4.47e-08;9!UBERON:0000489;8.59e-08;29!UBERON:0010371;8.96e-08;31!UBERON:0004211;9.32e-08;10!UBERON:0009773;9.32e-08;10!UBERON:0001231;9.32e-08;10!UBERON:0004810;9.32e-08;10!UBERON:0000072;3.87e-07;37!UBERON:0000065;6.21e-07;44 | |||
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| ||
|short_description=p5@FADS2 | |||
}} | }} |
Latest revision as of 17:05, 18 September 2015
Short description: | p5@FADS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FADS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000517839_5end |
EntrezGene: | FADS2 |
HGNC: | 3575 |
UniProt: | E5RHL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.28e-41 | 253 |
embryonic cell | 3.52e-24 | 250 |
kidney cell | 1.44e-11 | 17 |
kidney epithelial cell | 1.44e-11 | 17 |
ectodermal cell | 7.08e-11 | 72 |
squamous epithelial cell | 7.19e-11 | 63 |
epithelial cell of nephron | 1.68e-10 | 15 |
kidney cortical cell | 1.37e-08 | 12 |
renal cortical epithelial cell | 1.37e-08 | 12 |
mesodermal cell | 2.83e-08 | 121 |
ecto-epithelial cell | 3.55e-08 | 34 |
lining cell | 8.95e-08 | 58 |
barrier cell | 8.95e-08 | 58 |
kidney tubule cell | 9.08e-08 | 10 |
nephron tubule epithelial cell | 9.08e-08 | 10 |
respiratory epithelial cell | 1.29e-07 | 13 |
meso-epithelial cell | 1.58e-07 | 45 |
neurectodermal cell | 6.64e-07 | 59 |
endothelial cell | 7.26e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.68e-10 | 15 |
renal tubule | 1.68e-10 | 15 |
nephron tubule | 1.68e-10 | 15 |
nephron | 1.68e-10 | 15 |
uriniferous tubule | 1.68e-10 | 15 |
nephrogenic mesenchyme | 1.68e-10 | 15 |
cortex | 1.72e-09 | 15 |
excretory tube | 2.74e-09 | 16 |
kidney epithelium | 2.74e-09 | 16 |
trunk region element | 3.57e-09 | 101 |
kidney | 3.66e-09 | 26 |
kidney mesenchyme | 3.66e-09 | 26 |
upper urinary tract | 3.66e-09 | 26 |
kidney rudiment | 3.66e-09 | 26 |
kidney field | 3.66e-09 | 26 |
urinary system structure | 4.55e-09 | 47 |
epithelium | 7.85e-09 | 306 |
trunk | 9.17e-09 | 199 |
primordium | 1.14e-08 | 160 |
cortex of kidney | 1.37e-08 | 12 |
renal parenchyma | 1.37e-08 | 12 |
cell layer | 1.40e-08 | 309 |
renal system | 1.51e-08 | 48 |
ectodermal placode | 2.64e-08 | 31 |
parenchyma | 3.74e-08 | 15 |
larynx | 5.35e-08 | 9 |
nephron tubule epithelium | 9.08e-08 | 10 |
subdivision of trunk | 1.08e-07 | 112 |
respiratory primordium | 2.74e-07 | 38 |
endoderm of foregut | 2.74e-07 | 38 |
cavitated compound organ | 3.83e-07 | 31 |
abdomen element | 7.06e-07 | 54 |
abdominal segment element | 7.06e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.77e-09 | 106 |
cell type cancer | 2.53e-08 | 143 |