FFCP PHASE1:Hg19::chr11:116707862..116707876,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:116707862..116707876,- to FFCP PHASE1:Hg19::chr11:116707862..116707876,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=335 | |EntrezGene=335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=600 | |HGNC=600 | ||
|TSSclassifier=strong | |||
|UniProt=P02647 | |UniProt=P02647 | ||
|association_with_transcript=-3bp_to_M29068_5end | |||
|cluster_id=chr11:116707862..116707876,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_APOA1_5end | |||
|id=chr11:116707862..116707876,- | |||
|ontology_enrichment_celltype=CL:0000181!2.66e-26!12;CL:0000417!2.66e-26!12;CL:0000668!2.66e-26!12;CL:0000414!2.66e-26!12;CL:0000412!2.66e-26!12;CL:0000182!2.66e-26!12;CL:0000223!1.24e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.65e-40;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.66e-40,12;CL:0000223,1.11e-12,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.17e-32;11!UBERON:0009497;4.75e-27;13!UBERON:0001041;1.58e-11;30!UBERON:0003104;3.40e-11;31!CL:0000223;2.46e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.21e-27!19;UBERON:0006925!5.21e-27!19;UBERON:0008836!5.21e-27!19;UBERON:0005057!1.03e-23!26;UBERON:0008835!3.95e-23!22;UBERON:0003894!3.95e-23!22;UBERON:0009854!4.62e-22!23;UBERON:0007499!3.51e-20!25;UBERON:0009497!3.51e-20!25;UBERON:0000015!3.51e-20!25;UBERON:0002423!3.51e-20!25;UBERON:0006235!3.51e-20!25;UBERON:0004161!3.51e-20!25;UBERON:0009856!2.39e-19!26;UBERON:0002365!5.43e-16!31;UBERON:0002330!5.43e-16!31;UBERON:0002368!5.37e-14!35;UBERON:0003929!7.28e-13!54;UBERON:0000949!1.47e-10!45;UBERON:0005172!2.72e-10!55;UBERON:0005173!2.72e-10!55;UBERON:0004921!8.86e-10!129;UBERON:0004185!8.86e-10!129;UBERON:0002530!1.51e-09!59;UBERON:0002417!4.13e-09!61;UBERON:0000916!4.13e-09!61;UBERON:0001048!8.35e-09!168;UBERON:0003914!4.80e-08!118;UBERON:0005911!8.63e-08!82;UBERON:0002134!1.04e-07!1;UBERON:0005208!1.04e-07!1;UBERON:0005946!1.04e-07!1;UBERON:0005965!1.04e-07!1;UBERON:0002078!1.04e-07!1;UBERON:0001007!1.27e-07!155;UBERON:0001555!1.27e-07!155;UBERON:0007026!1.27e-07!155;UBERON:0000466!2.20e-07!126;UBERON:0004119!9.75e-07!169;UBERON:0000925!9.75e-07!169;UBERON:0006595!9.75e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.04e-41;19!UBERON:0006925;2.04e-41;19!UBERON:0002423;3.16e-31;25!UBERON:0002365;3.10e-24;31!UBERON:0002330;3.10e-24;31!UBERON:0002368;3.16e-21;33!UBERON:0002108;1.16e-18;4!UBERON:0000949;3.14e-15;43!UBERON:0000160;9.24e-14;17!UBERON:0001007;1.42e-11;81!UBERON:0005409;9.51e-11;22!UBERON:0002530;1.15e-09;57!UBERON:0005172;2.33e-09;52!UBERON:0005173;2.33e-09;52!UBERON:0002417;1.09e-08;58!UBERON:0000916;1.09e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.04e-41,19;UBERON:0006925,2.04e-41,19;UBERON:0008836,2.04e-41,19;UBERON:0008835,1.25e-35,22;UBERON:0003894,1.25e-35,22;UBERON:0009854,4.93e-34,23;UBERON:0007499,3.17e-31,25;UBERON:0009497,3.17e-31,25;UBERON:0000015,3.17e-31,25;UBERON:0002423,3.17e-31,25;UBERON:0006235,3.17e-31,25;UBERON:0004161,3.17e-31,25;UBERON:0009856,5.53e-30,26;UBERON:0002365,5.68e-25,31;UBERON:0002330,5.68e-25,31;UBERON:0002368,5.44e-22,35;UBERON:0003929,1.01e-20,54;UBERON:0002108,9.69e-19,4;UBERON:0000949,7.51e-17,45;UBERON:0004921,1.30e-16,118;UBERON:0002530,1.54e-15,59;UBERON:0005172,7.57e-14,54;UBERON:0005173,7.57e-14,54;UBERON:0000160,8.29e-14,17;UBERON:0001007,4.13e-13,145;UBERON:0001555,4.13e-13,145;UBERON:0007026,4.13e-13,145;UBERON:0005911,4.25e-13,82;UBERON:0002417,2.41e-12,60;UBERON:0000916,2.41e-12,60;UBERON:0004119,1.14e-11,160;UBERON:0000925,1.14e-11,160;UBERON:0006595,1.14e-11,160;UBERON:0005409,1.59e-09,25;UBERON:0011216,7.85e-09,223;UBERON:0001041,3.88e-08,87;UBERON:0005177,7.69e-07,101;UBERON:0005256,8.97e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2106041786197,15.725235466842,36.6289742142471,0,1.8448265781467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9688643235079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71521770914025,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,1.16495949527454,2.20592910460226,1.89556474276683,1.81989568406299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.5432965639932,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.52506200131,1.96703604453562,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,4.7612415646386,0,0,0,0,0,0,0,0,0,0,1.28823786971007,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2106041786197,15.725235466842,36.6289742142471,0,1.8448265781467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4865618636356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9688643235079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.71521770914025,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.0671834724867263,0,1.16495949527454,2.20592910460226,1.89556474276683,1.81989568406299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.5432965639932,7.95041333473328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.52506200131,1.96703604453562,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,4.7612415646386,0,0,0,0,0,0,0,0,0,0,1.28823786971007,1.07185652062471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@APOA1 | |||
}} | }} |
Latest revision as of 19:55, 15 September 2015
Short description: | p4@APOA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_APOA1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -3bp_to_M29068_5end |
EntrezGene: | APOA1 |
HGNC: | 600 |
UniProt: | P02647 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.66e-40 | 12 |
endodermal cell | 1.11e-12 | 58 |