FFCP PHASE1:Hg19::chr10:76995689..76995737,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:76995689..76995737,- to FFCP PHASE1:Hg19::chr10:76995689..76995737,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=118881 | |EntrezGene=118881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26309 | |HGNC=26309 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZW4 | |UniProt=F5GZW4 | ||
|association_with_transcript=0bp_to_ENST00000494596,ENST00000536650,uc001jxc.1_5end | |||
|cluster_id=chr10:76995689..76995737,- | |||
|description=CAGE_peak_1_at_COMTD1_5end | |||
|id=chr10:76995689..76995737,- | |||
|ontology_enrichment_celltype=CL:0000066!3.22e-33!254;CL:0000223!1.96e-11!59;CL:0002076!6.32e-10!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.15e-08;42!CL:1000497;6.35e-07;17!CL:0002518;6.35e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.27e-34,253;CL:0000223,7.78e-12,58;CL:0002076,2.30e-10,42;CL:1000497,7.18e-07,17;CL:0002518,7.18e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.92e-20!106;DOID:162!5.78e-14!235;DOID:14566!7.23e-14!239;DOID:0050687!1.34e-13!143 | |||
|ontology_enrichment_disease_v019=DOID:305;8.13e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.01e-20,106;DOID:162,5.07e-14,235;DOID:14566,6.35e-14,239;DOID:0050687,1.25e-13,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.87e-17!169;UBERON:0000925!1.87e-17!169;UBERON:0006595!1.87e-17!169;UBERON:0004921!2.11e-16!129;UBERON:0004185!2.11e-16!129;UBERON:0001007!3.30e-14!155;UBERON:0001555!3.30e-14!155;UBERON:0007026!3.30e-14!155;UBERON:0000077!3.62e-14!130;UBERON:0001041!3.78e-14!98;UBERON:0001004!1.22e-12!72;UBERON:0000065!1.08e-10!53;UBERON:0000072!2.75e-10!46;UBERON:0005177!5.27e-10!107;UBERON:0003104!5.54e-10!238;UBERON:0009142!5.54e-10!238;UBERON:0008947!5.64e-09!38;UBERON:0003258!5.64e-09!38;UBERON:0001048!8.79e-09!168;UBERON:0002113!2.77e-08!27;UBERON:0003918!2.77e-08!27;UBERON:0005095!2.77e-08!27;UBERON:0007687!2.77e-08!27;UBERON:0009569!3.36e-08!113;UBERON:0000466!7.64e-08!126;UBERON:0006554!7.74e-08!44;UBERON:0001008!1.21e-07!45;UBERON:0000063!6.26e-07!97;UBERON:0005172!9.35e-07!55;UBERON:0005173!9.35e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.04e-09;30!UBERON:0001008;4.04e-09;30!UBERON:0002113;8.76e-09;24!UBERON:0011143;8.76e-09;24!UBERON:0000072;1.00e-07;37!UBERON:0000065;1.28e-07;44!UBERON:0004921;7.95e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.65e-16,160;UBERON:0000925,3.65e-16,160;UBERON:0006595,3.65e-16,160;UBERON:0004921,6.65e-16,118;UBERON:0001041,8.59e-14,87;UBERON:0001007,1.92e-13,145;UBERON:0001555,1.92e-13,145;UBERON:0007026,1.92e-13,145;UBERON:0005177,5.91e-12,101;UBERON:0001004,8.80e-12,74;UBERON:0000065,5.38e-10,54;UBERON:0006554,1.00e-09,47;UBERON:0000072,1.40e-09,47;UBERON:0001008,1.70e-09,48;UBERON:0002113,3.35e-09,26;UBERON:0003918,3.35e-09,26;UBERON:0011143,3.35e-09,26;UBERON:0005095,3.35e-09,26;UBERON:0007687,3.35e-09,26;UBERON:0008947,6.05e-09,38;UBERON:0003258,6.05e-09,38;UBERON:0009569,2.21e-08,112;UBERON:0001048,1.56e-07,160;UBERON:0005172,2.89e-07,54;UBERON:0005173,2.89e-07,54;UBERON:0003103,7.35e-07,68 | |||
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| ||
|short_description=p1@COMTD1 | |||
}} | }} |
Latest revision as of 09:12, 19 September 2015
Short description: | p1@COMTD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COMTD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000494596, ENST00000536650, uc001jxc.1_5end |
EntrezGene: | COMTD1 |
HGNC: | 26309 |
UniProt: | F5GZW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.27e-34 | 253 |
endodermal cell | 7.78e-12 | 58 |
endo-epithelial cell | 2.30e-10 | 42 |
kidney cell | 7.18e-07 | 17 |
kidney epithelial cell | 7.18e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.65e-16 | 160 |
endoderm | 3.65e-16 | 160 |
presumptive endoderm | 3.65e-16 | 160 |
subdivision of digestive tract | 6.65e-16 | 118 |
foregut | 8.59e-14 | 87 |
digestive system | 1.92e-13 | 145 |
digestive tract | 1.92e-13 | 145 |
primitive gut | 1.92e-13 | 145 |
trunk region element | 5.91e-12 | 101 |
respiratory system | 8.80e-12 | 74 |
respiratory tract | 5.38e-10 | 54 |
urinary system structure | 1.00e-09 | 47 |
segment of respiratory tract | 1.40e-09 | 47 |
renal system | 1.70e-09 | 48 |
kidney | 3.35e-09 | 26 |
kidney mesenchyme | 3.35e-09 | 26 |
upper urinary tract | 3.35e-09 | 26 |
kidney rudiment | 3.35e-09 | 26 |
kidney field | 3.35e-09 | 26 |
respiratory primordium | 6.05e-09 | 38 |
endoderm of foregut | 6.05e-09 | 38 |
subdivision of trunk | 2.21e-08 | 112 |
primordium | 1.56e-07 | 160 |
abdomen element | 2.89e-07 | 54 |
abdominal segment element | 2.89e-07 | 54 |
compound organ | 7.35e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.01e-20 | 106 |
cancer | 5.07e-14 | 235 |
disease of cellular proliferation | 6.35e-14 | 239 |
cell type cancer | 1.25e-13 | 143 |