FFCP PHASE1:Hg19::chr10:123923111..123923160,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:123923111..123923160,+ to FFCP PHASE1:Hg19::chr10:123923111..123923160,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10579 | |EntrezGene=10579 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11523 | |HGNC=11523 | ||
|TSSclassifier=strong | |||
|UniProt=Q4VXL8,O95359 | |UniProt=Q4VXL8,O95359 | ||
|association_with_transcript=6bp_to_ENST00000368999,NM_006997,NM_206860,uc001lfz.2,uc001lga.2,uc009xzy.2_5end | |||
|cluster_id=chr10:123923111..123923160,+ | |||
|description=CAGE_peak_4_at_TACC2_5end | |||
|id=chr10:123923111..123923160,+ | |||
|ontology_enrichment_celltype=CL:0000047!1.85e-10!8;CL:0002319!9.62e-10!25;CL:0000133!1.43e-09!59;CL:0000540!2.97e-08!6;CL:0000031!2.97e-08!6;CL:0000404!2.97e-08!6;CL:0002322!7.34e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.02e-12;6!CL:0000404;1.02e-12;6!CL:0002321;2.60e-11;15!CL:0002322;2.17e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.02e-16,8;CL:0000540,9.71e-13,6;CL:0000031,9.71e-13,6;CL:0000404,9.71e-13,6;CL:0002322,2.01e-10,5;CL:0000133,1.90e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.85e-13;82!CL:0000031;1.02e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;4.53e-10;22!DOID:2994;4.53e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.36e-10,22;DOID:2994,4.36e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.72e-59!94;UBERON:0001016!1.72e-59!94;UBERON:0001017!5.10e-59!82;UBERON:0005743!2.93e-58!86;UBERON:0001049!1.29e-49!57;UBERON:0005068!1.29e-49!57;UBERON:0006241!1.29e-49!57;UBERON:0007135!1.29e-49!57;UBERON:0002616!1.09e-46!59;UBERON:0000955!4.36e-46!69;UBERON:0006238!4.36e-46!69;UBERON:0003075!5.31e-45!86;UBERON:0007284!5.31e-45!86;UBERON:0002346!2.23e-43!90;UBERON:0002780!9.58e-39!41;UBERON:0001890!9.58e-39!41;UBERON:0006240!9.58e-39!41;UBERON:0003080!1.95e-37!42;UBERON:0003056!5.90e-36!61;UBERON:0004121!5.88e-34!169;UBERON:0000924!1.92e-33!173;UBERON:0006601!1.92e-33!173;UBERON:0001893!1.59e-32!34;UBERON:0002020!1.63e-32!34;UBERON:0003528!1.63e-32!34;UBERON:0000153!1.30e-31!129;UBERON:0007811!1.30e-31!129;UBERON:0002791!1.72e-31!33;UBERON:0001869!2.54e-31!32;UBERON:0000033!1.46e-30!123;UBERON:0007023!6.36e-29!115;UBERON:0000956!2.95e-25!25;UBERON:0000203!2.95e-25!25;UBERON:0002619!1.60e-23!22;UBERON:0001950!9.08e-22!20;UBERON:0000025!3.20e-16!194;UBERON:0000119!4.32e-15!312;UBERON:0000477!8.86e-14!286;UBERON:0000483!1.07e-13!309;UBERON:0000922!5.58e-13!612;UBERON:0003076!6.52e-13!15;UBERON:0003057!6.52e-13!15;UBERON:0004111!1.26e-12!241;UBERON:0000064!3.52e-12!219;UBERON:0000475!2.06e-11!365;UBERON:0004732!2.13e-11!13;UBERON:0000468!3.44e-11!659;UBERON:0004733!1.08e-10!12;UBERON:0002028!1.08e-10!12;UBERON:0007277!1.08e-10!12;UBERON:0000481!1.14e-10!347;UBERON:0002050!6.37e-10!605;UBERON:0005423!6.37e-10!605;UBERON:0000923!1.46e-09!604;UBERON:0005291!1.46e-09!604;UBERON:0006598!1.46e-09!604;UBERON:0002532!1.46e-09!604;UBERON:0000467!2.06e-09!625;UBERON:0000480!2.55e-09!626;UBERON:0001871!6.64e-09!7;UBERON:0002420!8.75e-09!9;UBERON:0007245!8.75e-09!9;UBERON:0010009!8.75e-09!9;UBERON:0010011!8.75e-09!9;UBERON:0000454!8.75e-09!9;UBERON:0002308!1.15e-08!9;UBERON:0000125!1.15e-08!9;UBERON:0002680!2.20e-08!9;UBERON:0001895!2.20e-08!9;UBERON:0010092!2.20e-08!9;UBERON:0001894!1.52e-07!7;UBERON:0006222!1.52e-07!7;UBERON:0000062!1.91e-07!511;UBERON:0000200!2.12e-07!6;UBERON:0009663!5.01e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.46e-41;32!UBERON:0001893;2.18e-39;34!UBERON:0003528;2.30e-39;34!UBERON:0002020;2.30e-39;34!UBERON:0002791;6.65e-39;32!UBERON:0002780;1.63e-38;41!UBERON:0001890;1.63e-38;41!UBERON:0002619;2.22e-38;22!UBERON:0000956;4.74e-36;25!UBERON:0000203;4.74e-36;25!UBERON:0001950;1.90e-35;20!UBERON:0000073;3.21e-35;53!UBERON:0002616;3.21e-35;53!UBERON:0001017;2.30e-24;75!UBERON:0000955;2.99e-24;68!UBERON:0001016;9.78e-23;83!UBERON:0001871;2.27e-12;6!UBERON:0000922;2.34e-11;49!UBERON:0004732;2.69e-11;13!UBERON:0000200;2.80e-11;6!UBERON:0002420;4.74e-11;9!UBERON:0007245;4.74e-11;9!UBERON:0010009;4.74e-11;9!UBERON:0010011;4.74e-11;9!UBERON:0000454;4.74e-11;9!UBERON:0000125;6.90e-11;9!UBERON:0002308;6.90e-11;9!UBERON:0004733;3.60e-10;12!UBERON:0002028;3.60e-10;12!UBERON:0001872;5.17e-10;5!UBERON:0011216;5.21e-10;132!UBERON:0002021;9.27e-10;5!UBERON:0002298;1.04e-09;6!UBERON:0001894;3.40e-09;7!UBERON:0000349;4.33e-09;5!UBERON:0007023;9.89e-09;114!UBERON:0009663;3.41e-08;7!UBERON:0000369;2.39e-07;4!UBERON:0002435;2.39e-07;4!UBERON:0000204;2.39e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.28e-74,89;UBERON:0001017,9.03e-71,81;UBERON:0001049,6.94e-64,56;UBERON:0005068,6.94e-64,56;UBERON:0006241,6.94e-64,56;UBERON:0007135,6.94e-64,56;UBERON:0000073,2.58e-62,53;UBERON:0002616,2.58e-62,53;UBERON:0000955,2.28e-54,68;UBERON:0006238,2.28e-54,68;UBERON:0002780,1.31e-53,41;UBERON:0001890,1.31e-53,41;UBERON:0003080,1.31e-53,41;UBERON:0006240,1.31e-53,41;UBERON:0003075,1.88e-50,82;UBERON:0007284,1.88e-50,82;UBERON:0002346,2.66e-49,86;UBERON:0001869,3.49e-46,32;UBERON:0001893,1.13e-45,34;UBERON:0003528,1.17e-45,34;UBERON:0002020,1.17e-45,34;UBERON:0003056,2.17e-44,61;UBERON:0002791,8.03e-43,32;UBERON:0004121,5.64e-40,171;UBERON:0000924,5.64e-40,171;UBERON:0006601,5.64e-40,171;UBERON:0010371,1.16e-39,104;UBERON:0002619,2.59e-38,22;UBERON:0000956,5.03e-36,25;UBERON:0000203,5.03e-36,25;UBERON:0001950,2.28e-35,20;UBERON:0011216,2.34e-28,223;UBERON:0010314,1.31e-26,132;UBERON:0007023,7.54e-24,114;UBERON:0000025,4.29e-13,192;UBERON:0001871,2.81e-12,6;UBERON:0003076,1.06e-11,15;UBERON:0003057,1.06e-11,15;UBERON:0000200,2.56e-11,6;UBERON:0004732,3.10e-11,13;UBERON:0002420,3.53e-11,9;UBERON:0007245,3.53e-11,9;UBERON:0010009,3.53e-11,9;UBERON:0010011,3.53e-11,9;UBERON:0000454,3.53e-11,9;UBERON:0000125,5.35e-11,9;UBERON:0002308,5.35e-11,9;UBERON:0004733,4.15e-10,12;UBERON:0002028,4.15e-10,12;UBERON:0007277,4.15e-10,12;UBERON:0001872,4.72e-10,5;UBERON:0002021,9.38e-10,5;UBERON:0002298,1.33e-09,6;UBERON:0001894,3.56e-09,7;UBERON:0006222,3.56e-09,7;UBERON:0000119,3.87e-09,309;UBERON:0000349,4.19e-09,5;UBERON:0000922,1.04e-08,592;UBERON:0009663,2.56e-08,7;UBERON:0004111,2.68e-08,240;UBERON:0000483,8.92e-08,306;UBERON:0000369,1.96e-07,4;UBERON:0002435,1.96e-07,4;UBERON:0000204,1.96e-07,4;UBERON:0010082,1.96e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0.738726348460727,0.816002764977012,0.313454721478088,0.286235987131057,2.73748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,1.32348744029695,1.77383517970051,0.790513071238134,1.17881167947941,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0,1.46437234528902,0,0,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0.491337269247072,0,0,0,0,0.718618141816238,0,0.250237039743928,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,13.2951339681259,14.0481554420774,13.9432731443422,9.95146128147556,13.6253259472839,8.02950189966826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0,0.343135620597051,0,0,0,0,0,0,1.44331342025273,3.59384255422738,0.117408694235822,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,17.2681869891856,3.05172048183296,9.75399201418635,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0,0.179060963239896,0,0,0,0,13.2129204595681,57.2615356973536,29.3849748855524,35.6809645162163,25.5175500661265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783204629850962,1.37257369524342,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0,0.784349769176855,1.46139224653261,0.316654886678627,0,0,0.215915916102139,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.255679882248303,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,2.232950216158,0,0,0.767693373934002,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97073823883149,5.06409899077846,0,0,0.422250816255987,0.19924798825107,0,2.51932747854276,0,0,0,0,0,0,0.0986434056369336,0,0,9.69332746095218,5.47331779154922,31.9382076801911,0,0,0,0,0,0,0,0.874813840149763,1.73624994933292,1.77148277162768,3.49729672013683,4.5774520895125,8.18286523491062,4.43321428430321,3.72955175161753,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4441205797345,0,0,0,1.14581926067151,0,3.27970224015475,0,0,0,1.57833761139756,1.20990716048664,25.4040392153307,0.063186579628488,1.9542044523884,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.775912131907355,0,1.12990370390266,0,0,8.10378188235247,0,0,0,0,0,0,5.49103993158287,0,0,0,0,0.209205692624666,0,0.288950589901519,1.80126086612937,1.36905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.604651252380536,0,0,0,0,0,0,0,3.97614844904652,5.31193283835145,14.3070302133867,14.9917985890985,17.863934535255,0,0,9.29468216867777,0,0,0.577000469484979,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,4.00777164720807,2.38018683136842,0,0,0,2.20086027139532,0,0,0,0,0,0,0,0,0,0,9.74674997963685,6.22333951000012,6.50992839673799,1.14681839138014,2.44043913381075,4.28465180295546,0,0,0,0,0,1.40500471742064,5.50699908721136,0,0,0,0.947015026375446,0,0,0,0.453692771289717,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.77466337143481,0,0,0,0,0,0,0,0,0,0,0,0,0,12.9173315016688,17.2519698234691,3.61711666268562,21.2958794474427,0,1.70059936081346,0,0,0,0,11.2079904759966,0.352675943690684,0,8.4140284876362,4.25089728976755,5.74681892605745,10.87116730476,21.9302375712895,8.09139853831349,5.81312324274664,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,9.59033701581204,7.02970288752463,8.47415865654855,9.38553990869821,27.8957152599292,0,0,0,0,6.42842203053944,0.336283722218824,57.0547667982434,47.8090601837725,0,0,0,3.19457744991109,8.81355165742178,0,0,0.078493092850514,6.75597036638808,0,1.82631744101899,0,0,1.42953088353313,0.790068058663633,0,1.04314963381548,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,27.1369777616043,0,0,0,3.07833446887202,31.8531599925681,0.154348316215889,1.31135736302374,0,0.245148321753905,0,2.1593931382644,0.594092800654172,5.9171801861676,0.169927114687817,0,0.128915775947154,0.0999411559249289,0,0,0,0.730336388246517,0,0.573358332605805,0,9.2468426659644,21.8175345170189,2.1161073620616,0,0,0,4.03732559472253,8.08565232531347,2.28057301820587,18.2560005238147,74.8208734743569,33.3578485311487,8.77476387523313,0.0757786982182394,0,2.48750831837634,1.34462894620464,0.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| ||
|short_description=p4@TACC2 | |||
}} | }} |
Latest revision as of 20:00, 16 September 2015
Short description: | p4@TACC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TACC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 6bp_to_ENST00000368999, NM_006997, NM_206860, uc001lfz.2, uc001lga.2, uc009xzy.2_5end |
EntrezGene: | TACC2 |
HGNC: | 11523 |
UniProt: | Q4VXL8O95359 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.02e-16 | 8 |
neuron | 9.71e-13 | 6 |
neuroblast | 9.71e-13 | 6 |
electrically signaling cell | 9.71e-13 | 6 |
embryonic stem cell | 2.01e-10 | 5 |
neurectodermal cell | 1.90e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.36e-10 | 22 |
germ cell cancer | 4.36e-10 | 22 |