FFCP PHASE1:Hg19::chr10:105253535..105253604,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:105253535..105253604,+ to FFCP PHASE1:Hg19::chr10:105253535..105253604,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9148 | |EntrezGene=9148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7761 | |HGNC=7761 | ||
|TSSclassifier=strong | |||
|UniProt=B4DS86,O76050 | |UniProt=B4DS86,O76050 | ||
|association_with_transcript=-130bp_to_NM_004210,uc001kxh.2_5end | |||
|cluster_id=chr10:105253535..105253604,+ | |||
|coexpression_cluster_id=C1559 | |||
|description=CAGE_peak_5_at_NEURL_5end | |||
|id=chr10:105253535..105253604,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.55e-07;3!CL:0002322;7.69e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.60e-07,3;CL:0002322,9.44e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.57e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.96e-41!57;UBERON:0005068!7.96e-41!57;UBERON:0006241!7.96e-41!57;UBERON:0007135!7.96e-41!57;UBERON:0002780!6.87e-37!41;UBERON:0001890!6.87e-37!41;UBERON:0006240!6.87e-37!41;UBERON:0001017!6.10e-36!82;UBERON:0003080!1.13e-35!42;UBERON:0005743!1.05e-34!86;UBERON:0002616!9.26e-34!59;UBERON:0000955!2.12e-33!69;UBERON:0006238!2.12e-33!69;UBERON:0001869!2.77e-32!32;UBERON:0000073!5.88e-32!94;UBERON:0001016!5.88e-32!94;UBERON:0001893!8.76e-32!34;UBERON:0002020!9.45e-32!34;UBERON:0003528!9.45e-32!34;UBERON:0002791!1.22e-30!33;UBERON:0003075!3.47e-29!86;UBERON:0007284!3.47e-29!86;UBERON:0002619!1.93e-28!22;UBERON:0007023!3.03e-28!115;UBERON:0002346!3.70e-28!90;UBERON:0001950!3.63e-26!20;UBERON:0000956!4.50e-24!25;UBERON:0000203!4.50e-24!25;UBERON:0003056!9.48e-24!61;UBERON:0000033!8.43e-18!123;UBERON:0004121!4.23e-17!169;UBERON:0000924!7.37e-17!173;UBERON:0006601!7.37e-17!173;UBERON:0000153!8.71e-17!129;UBERON:0007811!8.71e-17!129;UBERON:0001871!6.48e-11!7;UBERON:0000064!1.13e-09!219;UBERON:0002420!1.24e-09!9;UBERON:0007245!1.24e-09!9;UBERON:0010009!1.24e-09!9;UBERON:0010011!1.24e-09!9;UBERON:0000454!1.24e-09!9;UBERON:0002308!4.62e-09!9;UBERON:0000125!4.62e-09!9;UBERON:0000200!1.65e-08!6;UBERON:0000025!6.45e-08!194;UBERON:0002021!1.18e-07!5;UBERON:0000349!1.22e-07!5;UBERON:0001872!2.53e-07!5;UBERON:0009663!3.37e-07!7;UBERON:0003076!5.34e-07!15;UBERON:0003057!5.34e-07!15;UBERON:0000062!5.68e-07!511;UBERON:0000922!6.20e-07!612;UBERON:0000483!6.83e-07!309;UBERON:0004111!9.29e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.91e-52;32!UBERON:0002619;8.65e-50;22!UBERON:0003528;1.59e-49;34!UBERON:0002020;1.59e-49;34!UBERON:0002791;6.99e-49;32!UBERON:0001893;1.73e-46;34!UBERON:0002780;2.25e-46;41!UBERON:0001890;2.25e-46;41!UBERON:0001950;9.84e-46;20!UBERON:0000956;3.47e-43;25!UBERON:0000203;3.47e-43;25!UBERON:0000073;3.54e-33;53!UBERON:0002616;3.54e-33;53!UBERON:0000955;5.75e-25;68!UBERON:0001017;4.30e-24;75!UBERON:0001016;2.54e-20;83!UBERON:0002420;1.79e-16;9!UBERON:0007245;1.79e-16;9!UBERON:0010009;1.79e-16;9!UBERON:0010011;1.79e-16;9!UBERON:0000454;1.79e-16;9!UBERON:0001871;2.78e-16;6!UBERON:0000125;2.12e-15;9!UBERON:0002308;2.12e-15;9!UBERON:0000200;4.89e-14;6!UBERON:0002021;1.69e-12;5!UBERON:0000349;2.15e-12;5!UBERON:0009663;4.18e-12;7!UBERON:0001872;6.80e-12;5!UBERON:0000369;8.83e-11;4!UBERON:0002435;8.83e-11;4!UBERON:0000204;8.83e-11;4!UBERON:0001894;8.92e-11;7!UBERON:0007023;1.08e-10;114!UBERON:0003296;6.53e-09;4!UBERON:0010133;6.53e-09;4!UBERON:0005383;1.64e-08;3!UBERON:0005382;1.64e-08;3!UBERON:0011216;5.95e-08;132!UBERON:0001870;9.74e-08;3!UBERON:0003124;3.55e-07;3!UBERON:0000920;3.55e-07;3!UBERON:0000922;5.43e-07;49!UBERON:0000473;7.66e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,8.21e-64,41;UBERON:0001890,8.21e-64,41;UBERON:0003080,8.21e-64,41;UBERON:0006240,8.21e-64,41;UBERON:0000073,1.81e-61,53;UBERON:0002616,1.81e-61,53;UBERON:0001049,1.70e-60,56;UBERON:0005068,1.70e-60,56;UBERON:0006241,1.70e-60,56;UBERON:0007135,1.70e-60,56;UBERON:0001869,4.64e-58,32;UBERON:0003528,1.78e-57,34;UBERON:0002020,1.78e-57,34;UBERON:0001893,3.51e-54,34;UBERON:0002791,5.43e-54,32;UBERON:0000955,1.01e-52,68;UBERON:0006238,1.01e-52,68;UBERON:0001017,3.26e-51,81;UBERON:0002619,8.10e-50,22;UBERON:0001016,7.76e-47,89;UBERON:0001950,1.02e-45,20;UBERON:0000956,3.28e-43,25;UBERON:0000203,3.28e-43,25;UBERON:0003056,1.55e-39,61;UBERON:0003075,1.67e-37,82;UBERON:0007284,1.67e-37,82;UBERON:0002346,3.38e-35,86;UBERON:0007023,5.27e-30,114;UBERON:0010371,9.00e-29,104;UBERON:0004121,1.21e-22,171;UBERON:0000924,1.21e-22,171;UBERON:0006601,1.21e-22,171;UBERON:0010314,1.43e-22,132;UBERON:0011216,1.83e-17,223;UBERON:0002420,1.99e-16,9;UBERON:0007245,1.99e-16,9;UBERON:0010009,1.99e-16,9;UBERON:0010011,1.99e-16,9;UBERON:0000454,1.99e-16,9;UBERON:0001871,2.61e-16,6;UBERON:0000125,2.17e-15,9;UBERON:0002308,2.17e-15,9;UBERON:0000200,5.43e-14,6;UBERON:0002021,1.80e-12,5;UBERON:0000349,1.93e-12,5;UBERON:0000025,1.99e-12,192;UBERON:0009663,4.62e-12,7;UBERON:0001872,7.05e-12,5;UBERON:0000369,8.96e-11,4;UBERON:0002435,8.96e-11,4;UBERON:0000204,8.96e-11,4;UBERON:0010082,8.96e-11,4;UBERON:0001894,9.03e-11,7;UBERON:0006222,9.03e-11,7;UBERON:0004111,1.65e-09,240;UBERON:0003296,6.21e-09,4;UBERON:0010133,6.21e-09,4;UBERON:0005383,1.68e-08,3;UBERON:0005382,1.68e-08,3;UBERON:0001870,1.06e-07,3;UBERON:0000920,4.60e-07,3;UBERON:0000473,7.34e-07,8 | |||
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| ||
|short_description=p5@NEURL | |||
}} | }} |
Latest revision as of 03:41, 16 September 2015
Short description: | p5@NEURL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NEURL_5end |
Coexpression cluster: | C1559_large_amygdala_pineal_temporal_medial_olfactory_cerebellum |
Association with transcript: | -130bp_to_NM_004210, uc001kxh.2_5end |
EntrezGene: | NEURL |
HGNC: | 7761 |
UniProt: | B4DS86O76050 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.60e-07 | 3 |
embryonic stem cell | 9.44e-07 | 5 |