FFCP PHASE1:Mm9::chrX:7317332..7317344,-: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:7317332..7317344,-
|short_description=p3@Ccdc120
|description=CAGE_peak_3_at_Ccdc120_5end
|association_with_transcript=0bp_to_ENSMUST00000128289,ENSMUST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=54648 | |EntrezGene=54648 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=A2AEV8 | |UniProt=A2AEV8 | ||
|association_with_transcript=0bp_to_ENSMUST00000128289,ENSMUST00000156787_5end | |||
|cluster_id=chrX:7317332..7317344,- | |||
|description=CAGE_peak_3_at_Ccdc120_5end | |||
|id=chrX:7317332..7317344,- | |||
|ontology_enrichment_celltype=CL:0000239!7.70e-07!6;CL:0000677!7.70e-07!6;CL:0000212!7.70e-07!6;CL:0000584!7.70e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.36e-14,6;CL:0000677,4.36e-14,6;CL:0000584,4.36e-14,6;CL:0000075,5.76e-12,7;CL:0002563,3.90e-09,9;CL:0002251,3.90e-09,9;CL:0000066,8.43e-08,25;CL:0000682,1.01e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.68e-17!43;UBERON:0005409!6.30e-15!59;UBERON:0004119!2.57e-13!130;UBERON:0000925!2.57e-13!130;UBERON:0006595!2.57e-13!130;UBERON:0001007!2.11e-12!128;UBERON:0001555!2.11e-12!128;UBERON:0007026!2.11e-12!128;UBERON:0004921!3.06e-11!126;UBERON:0004185!3.06e-11!126;UBERON:0000344!2.00e-09!15;UBERON:0001242!9.04e-08!13;UBERON:0000060!9.04e-08!13;UBERON:0001262!9.04e-08!13;UBERON:0004786!9.04e-08!13;UBERON:0004923!3.86e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.75e-26,31;UBERON:0005409,1.19e-15,47;UBERON:0000344,3.37e-14,15;UBERON:0004923,6.53e-12,24;UBERON:0000014,9.11e-11,5;UBERON:0001003,9.11e-11,5;UBERON:0002097,9.11e-11,5;UBERON:0002199,9.11e-11,5;UBERON:0007029,9.11e-11,5;UBERON:0007376,9.11e-11,5;UBERON:0002416,9.11e-11,5;UBERON:0007383,9.11e-11,5;UBERON:0001242,1.13e-10,13;UBERON:0001262,1.13e-10,13;UBERON:0004786,1.13e-10,13;UBERON:0003350,3.90e-09,9;UBERON:0004808,3.90e-09,9;UBERON:0001277,3.90e-09,9;UBERON:0004119,1.25e-07,118;UBERON:0000925,1.25e-07,118;UBERON:0006595,1.25e-07,118;UBERON:0000485,2.46e-07,11;UBERON:0001007,4.65e-07,116;UBERON:0001555,4.65e-07,116;UBERON:0007026,4.65e-07,116 | |||
|phase1_expression=0,4.18770489167233,2.27499619694768,3.0246421130683,7.01254021924886,1.6787927191189,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,2.3998863419011,2.75291137280604,3.44539178469012,3.01533397311352,1.72376986148711,1.90023419456374,0.756090389279792,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,5.439770669662,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.91347103775248,0,0,0,0,0,0,0,0,3.95511948374998,0,0,0,0,0,0,0,0.209446706813455,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.17340679996253,0,0,0.128867461322093,0.201683524623343,0.889512175379481,1.52180500890047,1.89811624617805,1.81168850196412,1.75934646160189,2.78539060857611,3.11942539390592,2.69645822596266,3.45820879799511,3.38540164532424,0,0,0,0,0,0.49095073923223,0.252946148497029,0.147610147979602,0,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0.575392274901621,1.94562272130042,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,1.95133647857799,0.788175720530955,0.221464689648775,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.565815239267694,0.590603785761546,1.22974059177571,2.58428293168221,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,1.90648863777438,0,1.97863503529776,1.29171541356724,1.02531972377865,2.14870219205646,2.9545361954111,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.41326727862668,0.523511883968059,0.777689839750757,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0.453460767230423,0.443971906748129,0.538283139656854,1.00730769818447,0.772758376128762,1.50145980360946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0.760437899670719,0.188626341386076,0.187283014939765,0.384150914429216,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0.771626443924566,0.249810577937946,0.233931608445408,0.859484216193193,0.191288332068843,0,0 | |phase1_expression=0,4.18770489167233,2.27499619694768,3.0246421130683,7.01254021924886,1.6787927191189,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,2.3998863419011,2.75291137280604,3.44539178469012,3.01533397311352,1.72376986148711,1.90023419456374,0.756090389279792,0.665191531965914,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,5.439770669662,0,0,0,0,0,0,0,0,0,0,0,0.432982082022428,0.253359865475099,0.505524445014783,0.91347103775248,0,0,0,0,0,0,0,0,3.95511948374998,0,0,0,0,0,0,0,0.209446706813455,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0.348252166522167,0.61734640922383,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.62586296177317,3.17340679996253,0,0,0.128867461322093,0.201683524623343,0.889512175379481,1.52180500890047,1.89811624617805,1.81168850196412,1.75934646160189,2.78539060857611,3.11942539390592,2.69645822596266,3.45820879799511,3.38540164532424,0,0,0,0,0,0.49095073923223,0.252946148497029,0.147610147979602,0,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0,0,0,0,0.575392274901621,1.94562272130042,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0,0,0,0,0,0,0.234690248288502,0,0.238043640886014,1.95133647857799,0.788175720530955,0.221464689648775,0,0,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0.565815239267694,0.590603785761546,1.22974059177571,2.58428293168221,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0,0,0.23467170806371,1.90648863777438,0,1.97863503529776,1.29171541356724,1.02531972377865,2.14870219205646,2.9545361954111,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.539457385539283,0.41326727862668,0.523511883968059,0.777689839750757,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0.453460767230423,0.443971906748129,0.538283139656854,1.00730769818447,0.772758376128762,1.50145980360946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0,0,0.760437899670719,0.188626341386076,0.187283014939765,0.384150914429216,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0,0,0.177475806159338,0.238436189947321,0.436039249896986,0.0941093804153306,0,0,0,0.271608227691724,0,0.118635018124174,0.0985044823755635,0,0,0.771626443924566,0.249810577937946,0.233931608445408,0.859484216193193,0.191288332068843,0,0 | ||
|short_description=p3@Ccdc120 | |||
}} | }} |
Latest revision as of 00:32, 2 October 2015
Short description: | p3@Ccdc120 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ccdc120_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000128289, ENSMUST00000156787_5end |
EntrezGene: | Ccdc120 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.36e-14 | 6 |
gut absorptive cell | 4.36e-14 | 6 |
enterocyte | 4.36e-14 | 6 |
columnar/cuboidal epithelial cell | 5.76e-12 | 7 |
intestinal epithelial cell | 3.90e-09 | 9 |
epithelial cell of alimentary canal | 3.90e-09 | 9 |
epithelial cell | 8.43e-08 | 25 |
M cell of gut | 1.01e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.75e-26 | 31 |
gastrointestinal system | 1.19e-15 | 47 |
mucosa | 3.37e-14 | 15 |
organ component layer | 6.53e-12 | 24 |
zone of skin | 9.11e-11 | 5 |
skin epidermis | 9.11e-11 | 5 |
skin of body | 9.11e-11 | 5 |
integument | 9.11e-11 | 5 |
surface | 9.11e-11 | 5 |
outer epithelium | 9.11e-11 | 5 |
integumental system | 9.11e-11 | 5 |
enveloping layer of ectoderm | 9.11e-11 | 5 |
intestinal mucosa | 1.13e-10 | 13 |
wall of intestine | 1.13e-10 | 13 |
gastrointestinal system mucosa | 1.13e-10 | 13 |
epithelium of mucosa | 3.90e-09 | 9 |
gastrointestinal system epithelium | 3.90e-09 | 9 |
intestinal epithelium | 3.90e-09 | 9 |
endoderm-derived structure | 1.25e-07 | 118 |
endoderm | 1.25e-07 | 118 |
presumptive endoderm | 1.25e-07 | 118 |
simple columnar epithelium | 2.46e-07 | 11 |
digestive system | 4.65e-07 | 116 |
digestive tract | 4.65e-07 | 116 |
primitive gut | 4.65e-07 | 116 |