FFCP PHASE1:Mm9::chrX:130646305..130646327,-: Difference between revisions
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|id=chrX:130646305..130646327,-
|short_description=p1@Nox1
|description=CAGE_peak_1_at_Nox1_5end
|association_with_transcript=-1bp_to_ENSMUST00000113275_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=237038 | |EntrezGene=237038 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=457 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CIZ9 | |UniProt=Q8CIZ9 | ||
|association_with_transcript=-1bp_to_ENSMUST00000113275_5end | |||
|cluster_id=chrX:130646305..130646327,- | |||
|description=CAGE_peak_1_at_Nox1_5end | |||
|id=chrX:130646305..130646327,- | |||
|ontology_enrichment_celltype=CL:0002563!4.49e-15!9;CL:0002251!4.49e-15!9;CL:0000239!1.24e-09!6;CL:0000677!1.24e-09!6;CL:0000212!1.24e-09!6;CL:0000584!1.24e-09!6;CL:0000066!5.41e-09!25;CL:0002076!1.92e-08!15;CL:0000075!3.46e-08!7;CL:0000473!4.51e-08!3;CL:0000627!4.51e-08!3;CL:0000682!4.51e-08!3;CL:0002250!4.34e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,3.32e-15,3;CL:0002563,7.67e-13,9;CL:0002251,7.67e-13,9;CL:0000239,8.99e-13,6;CL:0000677,8.99e-13,6;CL:0000584,8.99e-13,6;CL:0000066,3.79e-11,25;CL:0000075,5.64e-11,7;CL:0002076,1.21e-07,15;CL:0000473,8.68e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.42e-27!15;UBERON:0001242!4.53e-23!13;UBERON:0000060!4.53e-23!13;UBERON:0001262!4.53e-23!13;UBERON:0004786!4.53e-23!13;UBERON:0000160!3.01e-18!43;UBERON:0004923!9.21e-16!24;UBERON:0003350!4.49e-15!9;UBERON:0004808!4.49e-15!9;UBERON:0001277!4.49e-15!9;UBERON:0005409!2.17e-13!59;UBERON:0001007!4.05e-13!128;UBERON:0001555!4.05e-13!128;UBERON:0007026!4.05e-13!128;UBERON:0004119!8.56e-13!130;UBERON:0000925!8.56e-13!130;UBERON:0006595!8.56e-13!130;UBERON:0000485!4.67e-12!11;UBERON:0004921!3.28e-11!126;UBERON:0004185!3.28e-11!126;UBERON:0000331!6.49e-08!3;UBERON:0002116!6.49e-08!3;UBERON:0001204!6.49e-08!3;UBERON:0001168!6.49e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,7.08e-30,15;UBERON:0000160,2.73e-23,31;UBERON:0001242,4.01e-22,13;UBERON:0001262,4.01e-22,13;UBERON:0004786,4.01e-22,13;UBERON:0004923,3.70e-18,24;UBERON:0005409,2.50e-17,47;UBERON:0000331,7.10e-15,3;UBERON:0002116,7.10e-15,3;UBERON:0001204,7.10e-15,3;UBERON:0001168,7.10e-15,3;UBERON:0003350,7.67e-13,9;UBERON:0004808,7.67e-13,9;UBERON:0001277,7.67e-13,9;UBERON:0002108,2.72e-11,4;UBERON:0000485,1.75e-10,11;UBERON:0001962,1.79e-10,2;UBERON:0001961,1.79e-10,2;UBERON:0001744,1.79e-10,2;UBERON:0001155,2.47e-10,2;UBERON:0000059,2.47e-10,2;UBERON:0001007,6.56e-08,116;UBERON:0001555,6.56e-08,116;UBERON:0007026,6.56e-08,116;UBERON:0004119,9.88e-08,118;UBERON:0000925,9.88e-08,118;UBERON:0006595,9.88e-08,118;UBERON:0002465,2.92e-07,3 | |||
|phase1_expression=0,3.14077866875425,1.36499771816861,0,0.500895729946347,4.19698179779725,17.5209480446644,0,0.985521055061667,0.234064526321993,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.51983330145495,4.81759490241057,4.01962374880514,7.75371593086335,9.04979177280734,3.23039813075836,2.77233142735924,51.4414784720307,0,0,0,2.59966457776147,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,1.25667604400135,0.596869416123452,0.779856348476481,0,3.8904848977445,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1099679167598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.14077866875425,1.36499771816861,0,0.500895729946347,4.19698179779725,17.5209480446644,0,0.985521055061667,0.234064526321993,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,3.51983330145495,4.81759490241057,4.01962374880514,7.75371593086335,9.04979177280734,3.23039813075836,2.77233142735924,51.4414784720307,0,0,0,2.59966457776147,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,1.25667604400135,0.596869416123452,0.779856348476481,0,3.8904848977445,2.19055400579804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1099679167598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Nox1 | |||
}} | }} |
Latest revision as of 14:07, 1 October 2015
Short description: | p1@Nox1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nox1_5end |
Coexpression cluster: | MCL_coexpression_mm9:457 |
Association with transcript: | -1bp_to_ENSMUST00000113275_5end |
EntrezGene: | Nox1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 3.32e-15 | 3 |
intestinal epithelial cell | 7.67e-13 | 9 |
epithelial cell of alimentary canal | 7.67e-13 | 9 |
brush border epithelial cell | 8.99e-13 | 6 |
gut absorptive cell | 8.99e-13 | 6 |
enterocyte | 8.99e-13 | 6 |
epithelial cell | 3.79e-11 | 25 |
columnar/cuboidal epithelial cell | 5.64e-11 | 7 |
endo-epithelial cell | 1.21e-07 | 15 |
defensive cell | 8.68e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 7.08e-30 | 15 |
intestine | 2.73e-23 | 31 |
intestinal mucosa | 4.01e-22 | 13 |
wall of intestine | 4.01e-22 | 13 |
gastrointestinal system mucosa | 4.01e-22 | 13 |
organ component layer | 3.70e-18 | 24 |
gastrointestinal system | 2.50e-17 | 47 |
ileal mucosa | 7.10e-15 | 3 |
ileum | 7.10e-15 | 3 |
mucosa of small intestine | 7.10e-15 | 3 |
wall of small intestine | 7.10e-15 | 3 |
epithelium of mucosa | 7.67e-13 | 9 |
gastrointestinal system epithelium | 7.67e-13 | 9 |
intestinal epithelium | 7.67e-13 | 9 |
small intestine | 2.72e-11 | 4 |
simple columnar epithelium | 1.75e-10 | 11 |
gut-associated lymphoid tissue | 1.79e-10 | 2 |
mucosa-associated lymphoid tissue | 1.79e-10 | 2 |
lymphoid tissue | 1.79e-10 | 2 |
colon | 2.47e-10 | 2 |
large intestine | 2.47e-10 | 2 |
digestive system | 6.56e-08 | 116 |
digestive tract | 6.56e-08 | 116 |
primitive gut | 6.56e-08 | 116 |
endoderm-derived structure | 9.88e-08 | 118 |
endoderm | 9.88e-08 | 118 |
presumptive endoderm | 9.88e-08 | 118 |
lymphoid system | 2.92e-07 | 3 |