FFCP PHASE1:Mm9::chr6:38304547..38304565,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:38304547..38304565,-
|short_description=p1@Zc3hav1
|description=CAGE_peak_1_at_Zc3hav1_5end
|association_with_transcript=0bp_to_uc009bkb.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=78781 | |EntrezGene=78781 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1952 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009bkb.1_5end | |||
|cluster_id=chr6:38304547..38304565,- | |||
|description=CAGE_peak_1_at_Zc3hav1_5end | |||
|id=chr6:38304547..38304565,- | |||
|ontology_enrichment_celltype=CL:0000988!4.15e-13!32;CL:0002032!4.15e-13!32;CL:0000037!4.15e-13!32;CL:0000566!4.15e-13!32;CL:0000837!4.15e-13!32;CL:0002031!3.97e-12!25;CL:0002320!4.45e-11!46;CL:0000134!4.45e-11!46;CL:0000063!5.20e-09!66;CL:0000219!7.76e-09!54;CL:0000838!7.45e-08!12;CL:0000049!1.30e-07!19;CL:0000084!2.77e-07!11;CL:0000827!2.77e-07!11;CL:0000791!4.06e-07!9;CL:0000789!4.06e-07!9;CL:0002420!4.06e-07!9;CL:0002419!4.06e-07!9;CL:0000790!4.06e-07!9;CL:0000542!9.52e-07!13;CL:0000051!9.52e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.13e-13,32;CL:0002032,4.13e-13,32;CL:0000037,4.13e-13,32;CL:0000837,4.13e-13,32;CL:0002031,3.96e-12,25;CL:0002320,4.43e-11,46;CL:0000134,4.43e-11,46;CL:0000219,7.74e-09,54;CL:0000838,7.43e-08,12;CL:0000049,1.30e-07,19;CL:0000084,2.76e-07,11;CL:0000827,2.76e-07,11;CL:0000791,4.05e-07,9;CL:0000789,4.05e-07,9;CL:0002420,4.05e-07,9;CL:0002419,4.05e-07,9;CL:0000790,4.05e-07,9;CL:0000542,9.50e-07,13;CL:0000051,9.50e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.03e-17!48;UBERON:0002405!3.69e-17!70;UBERON:0002390!1.74e-16!45;UBERON:0003061!1.74e-16!45;UBERON:0004177!1.31e-11!29;UBERON:0005057!3.26e-11!51;UBERON:0002384!4.45e-11!46;UBERON:0003081!2.02e-10!88;UBERON:0000490!7.37e-10!66;UBERON:0006562!3.48e-09!24;UBERON:0001557!3.48e-09!24;UBERON:0001042!3.48e-09!24;UBERON:0008814!3.48e-09!24;UBERON:0009145!3.48e-09!24;UBERON:0002370!4.22e-09!23;UBERON:0000974!4.22e-09!23;UBERON:0004807!4.22e-09!23;UBERON:0005058!4.22e-09!23;UBERON:0003351!4.22e-09!23;UBERON:0009113!4.22e-09!23;UBERON:0003295!4.22e-09!23;UBERON:0009722!4.22e-09!23;UBERON:0005562!4.22e-09!23;UBERON:0007690!4.22e-09!23;UBERON:0003408!6.11e-09!24;UBERON:0000072!1.02e-08!27;UBERON:0003929!1.13e-08!55;UBERON:0004119!6.94e-08!130;UBERON:0000925!6.94e-08!130;UBERON:0006595!6.94e-08!130;UBERON:0005911!1.61e-07!69;UBERON:0001007!2.33e-07!128;UBERON:0001555!2.33e-07!128;UBERON:0007026!2.33e-07!128;UBERON:0000926!2.41e-07!193;UBERON:0004120!2.41e-07!193;UBERON:0006603!2.41e-07!193;UBERON:0004921!3.99e-07!126;UBERON:0004185!3.99e-07!126;UBERON:0002204!7.89e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.01e-17,48;UBERON:0002405,3.01e-17,48;UBERON:0002390,1.73e-16,45;UBERON:0003061,1.73e-16,45;UBERON:0000077,6.95e-13,35;UBERON:0004177,1.30e-11,29;UBERON:0005057,1.30e-11,29;UBERON:0000926,1.97e-11,120;UBERON:0004120,1.97e-11,120;UBERON:0006603,1.97e-11,120;UBERON:0002384,4.43e-11,46;UBERON:0004119,1.11e-10,118;UBERON:0000925,1.11e-10,118;UBERON:0006595,1.11e-10,118;UBERON:0001007,4.64e-10,116;UBERON:0001555,4.64e-10,116;UBERON:0007026,4.64e-10,116;UBERON:0003081,6.15e-10,87;UBERON:0000490,7.43e-10,66;UBERON:0004921,8.48e-10,114;UBERON:0006562,3.47e-09,24;UBERON:0001557,3.47e-09,24;UBERON:0001042,3.47e-09,24;UBERON:0008814,3.47e-09,24;UBERON:0009145,3.47e-09,24;UBERON:0002370,4.21e-09,23;UBERON:0000974,4.21e-09,23;UBERON:0004807,4.21e-09,23;UBERON:0005058,4.21e-09,23;UBERON:0003351,4.21e-09,23;UBERON:0009113,4.21e-09,23;UBERON:0003295,4.21e-09,23;UBERON:0009722,4.21e-09,23;UBERON:0005562,4.21e-09,23;UBERON:0007690,4.21e-09,23;UBERON:0003408,6.10e-09,24;UBERON:0000072,1.01e-08,27;UBERON:0003929,1.13e-08,55;UBERON:0001041,1.06e-07,80;UBERON:0005911,1.61e-07,69;UBERON:0002204,7.97e-07,32 | |||
|phase1_expression=2.24208385946712,32.1057375028212,39.1299345875001,20.8700305801713,21.0376206577466,27.7000798654618,25.2301651843168,296.467150621859,222.586969721785,267.535753586039,75.8495599238987,79.213753882369,223.416952560223,247.836840857858,94.6031723556482,92.9361477319301,81.149177862865,87.2252887215527,82.2686601634433,84.02915105601,13.6919697143222,45.0780918452019,26.9035782813103,27.3587042976725,24.31738379312,26.988902313406,25.8457197695445,32.3206849028834,22.4227634958521,17.6421090831952,30.8205409810874,67.3132513867209,81.1885519611633,126.785344812351,8.66554859253824,11.137721239019,7.9626048942324,128.070679005494,75.0081930742848,95.2813214032313,142.352020103505,131.144733112022,115.551464021415,30.5929267680653,26.9662637043909,16.702754446713,19.559783608701,1.30815093828268,1.75748946187577,2.3331587888914,20.5780039789283,1.43752564364972,97.6494767256026,633.966512117915,589.172429896739,45.5349201783626,36.9628137520996,41.2537673821954,0.404632921719196,0.528990979272033,0.633831403506179,13.2149367506962,36.4610866405567,28.3468410943641,51.4210508534827,34.1030455174128,19.1744070731779,6.14749288514487,0.518448061542388,0.270011876663381,0,1.14260393761521,0.883474163806454,0.244981598429908,0.575072826109418,0,3.30347642998166,1.40456071893706,2.61131106535614,0,0.365950574409639,0,1.95428099300967,3.37657566019008,2.90316670775939,3.24091444021034,1.13897344639282,0.372798891650601,47.4803232199064,45.3429360640713,46.9580471696718,6.0229671388697,27.19885334831,3.77792234146472,6.49776417447669,4.48026887097336,15.0275529540974,25.0532574189745,18.4448063268037,17.666978725517,0.422530259330042,26.9485602570067,2.54805239706646,14.2213340630666,17.7522653629196,19.2553497761075,23.25412447068,16.6708464389828,154.844854421009,31.0244070645484,17.868988656912,19.7902560902892,23.9840117146301,21.8547828801303,25.0463946199051,18.7243221081216,51.4165532887498,15.4721311904305,45.9997487013935,17.794353494215,36.6596920644253,44.1236480353052,35.4144346314432,2.04946557908083,1.67557365450764,29.377561348988,60.2670076264779,38.3937747835781,47.0159840170339,1.49790639404823,2.74500361691176,0.251308704225729,1.73824320192276,2.04572365864264,2.0778804455956,1.78465389374533,9.77657892963036,40.3078584776701,19.9650979162603,7.99679052368601,1.82168620147785,0.689706313300419,1.26043490863744,5.57607825992146,2.31324097114515,2.8185018462667,3.27956035959051,8.01980449290949,2.58681591519411,1.70195472151037,1.23165786914764,3.72632745126877,8.34141747676794,12.8853301613202,19.7550850951626,9.75267907410617,55.4748417977455,34.2272716462571,39.2145629165918,12.0132948070591,9.85009451920604,6.48223421259654,4.02466050494857,5.3126342571799,5.39934895105824,7.44108623201305,6.70683503499048,8.75740067753771,7.89887279584706,7.38753588355929,11.3496333364198,11.5497990066013,17.124908992702,11.1391327571109,2.10289948564127,1.64647379806855,37.3373224771692,22.7427487330648,3.41261200856374,6.0381534683714,13.0156135935314,12.3026950020239,18.2349995952794,25.1097826468578,24.2009821387701,31.2928013975621,29.4062194296315,29.8434708061726,28.6597208065107,35.9527763461689,27.0172562343368,21.5072575114717,1.89667900953082,4.79843752960861,6.76246414038483,2.8511185898344,3.68509725618489,3.29638353484497,7.27220176928959,8.11855813887812,5.65195420228949,5.67626954040282,8.89357881261447,73.9123818322297,84.1272499084509,76.2282560984654,93.1127957173228,93.5767379839377,72.3137419059232,55.8130506654573,28.5357999124062,32.6728081693817,38.8174157623857,26.4220072844637,15.601883655728,12.1237861414614,9.50806291666135,6.27176577772377,38.6134167448204,3.03186258832776,3.7481944581666,2.71592137240301,6.57132695207806,11.0554129911598,14.9967493758189,22.6355031515047,22.3841904630791,19.9318220683897,21.2074842314458,37.6885623846197,31.2559817177271,24.87963807602,99.5222473999197,68.5321161611574,15.7364567366092,14.9005843004556,3.69266356971921,1.75817529888305,30.4918998400616,8.83648245215305,18.9304931649754,19.1314984705353,24.3428439438063,26.0475989768282,24.285055474981,23.2122755246843,29.9559919239422,26.0107713541068,23.7172666767914,2.89189184779626,36.7624820689416,9.61554259803178,11.4020871547503,23.7556977080451,6.63725691699814,4.61283208694465,2.41858845571801,4.71512699389745,4.72483028609236,10.1453598821496,16.2809824695979,8.36127577798263,9.9819265947722,8.84902922220285,6.32511651449993,7.21948802737308,19.0646179222121,1.98067203434441,1.68166288917581,1.92903331528433,2.6601035046341,2.85390108163313,4.11372551505302,2.74018454203139,47.1690133208058,40.4599255349897,27.1249929607603,34.4612268647693,41.01196438076,26.9598774428857,31.7530435048343,37.2599842421289,29.1480836629851,1.48340241608408,99.4468526243503,21.6706211361384,51.8544676635193,91.3587016472751,100.880340058117,108.898410446305,92.4682659166573,96.2865991986767,93.5613822655949,8.59203556213602,3.00519193902079,8.3360981522008,8.5324219249223,7.94535524854981,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| ||
|short_description=p1@Zc3hav1 | |||
}} | }} |
Latest revision as of 03:22, 27 September 2015
Short description: | p1@Zc3hav1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zc3hav1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1952 |
Association with transcript: | 0bp_to_uc009bkb.1_5end |
EntrezGene: | Zc3hav1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.13e-13 | 32 |
hematopoietic oligopotent progenitor cell | 4.13e-13 | 32 |
hematopoietic stem cell | 4.13e-13 | 32 |
hematopoietic multipotent progenitor cell | 4.13e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 3.96e-12 | 25 |
connective tissue cell | 4.43e-11 | 46 |
mesenchymal cell | 4.43e-11 | 46 |
motile cell | 7.74e-09 | 54 |
lymphoid lineage restricted progenitor cell | 7.43e-08 | 12 |
common myeloid progenitor | 1.30e-07 | 19 |
T cell | 2.76e-07 | 11 |
pro-T cell | 2.76e-07 | 11 |
mature alpha-beta T cell | 4.05e-07 | 9 |
alpha-beta T cell | 4.05e-07 | 9 |
immature T cell | 4.05e-07 | 9 |
mature T cell | 4.05e-07 | 9 |
immature alpha-beta T cell | 4.05e-07 | 9 |
lymphocyte | 9.50e-07 | 13 |
common lymphoid progenitor | 9.50e-07 | 13 |