FFCP PHASE1:Mm9::chr4:98103495..98103511,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:98103495..98103511,+
|short_description=p12@Inadl
|description=CAGE_peak_12_at_Inadl_5end
|association_with_transcript=-121bp_to_uc008tue.1_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12695 | |EntrezGene=12695 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=84 | |||
|TSSclassifier=NA | |||
|UniProt=A2ADS9 | |UniProt=A2ADS9 | ||
|association_with_transcript=-121bp_to_uc008tue.1_5end | |||
|cluster_id=chr4:98103495..98103511,+ | |||
|description=CAGE_peak_12_at_Inadl_5end | |||
|id=chr4:98103495..98103511,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.66e-08!9;CL:0000789!1.66e-08!9;CL:0002420!1.66e-08!9;CL:0002419!1.66e-08!9;CL:0000790!1.66e-08!9;CL:0000084!6.74e-08!11;CL:0000827!6.74e-08!11;CL:0000624!2.05e-07!8;CL:0000838!4.79e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.66e-14,9;CL:0000789,2.66e-14,9;CL:0002420,2.66e-14,9;CL:0002419,2.66e-14,9;CL:0000790,2.66e-14,9;CL:0000084,1.09e-11,11;CL:0000827,1.09e-11,11;CL:0000624,1.04e-10,8;CL:0000838,1.05e-10,12;CL:0000542,7.12e-10,13;CL:0000051,7.12e-10,13;CL:0000738,1.61e-07,17;CL:0002087,1.61e-07,17;CL:0000815,6.50e-07,1;CL:0000792,6.50e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!9.84e-14!24;UBERON:0001557!9.84e-14!24;UBERON:0001042!9.84e-14!24;UBERON:0008814!9.84e-14!24;UBERON:0009145!9.84e-14!24;UBERON:0002370!5.20e-13!23;UBERON:0000974!5.20e-13!23;UBERON:0004807!5.20e-13!23;UBERON:0005058!5.20e-13!23;UBERON:0003351!5.20e-13!23;UBERON:0009113!5.20e-13!23;UBERON:0003295!5.20e-13!23;UBERON:0009722!5.20e-13!23;UBERON:0005562!5.20e-13!23;UBERON:0007690!5.20e-13!23;UBERON:0003408!3.13e-12!24;UBERON:0004177!1.46e-11!29;UBERON:0000072!1.53e-11!27;UBERON:0000065!4.47e-09!41;UBERON:0002390!8.10e-09!45;UBERON:0003061!8.10e-09!45;UBERON:0002193!8.68e-09!48;UBERON:0001004!1.05e-08!42;UBERON:0000063!1.25e-08!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.23e-21,23;UBERON:0000974,1.23e-21,23;UBERON:0004807,1.23e-21,23;UBERON:0005058,1.23e-21,23;UBERON:0003351,1.23e-21,23;UBERON:0009113,1.23e-21,23;UBERON:0003295,1.23e-21,23;UBERON:0009722,1.23e-21,23;UBERON:0005562,1.23e-21,23;UBERON:0007690,1.23e-21,23;UBERON:0006562,1.11e-20,24;UBERON:0003408,1.11e-20,24;UBERON:0001557,1.11e-20,24;UBERON:0001042,1.11e-20,24;UBERON:0008814,1.11e-20,24;UBERON:0009145,1.11e-20,24;UBERON:0000072,3.04e-18,27;UBERON:0004177,6.77e-17,29;UBERON:0005057,6.77e-17,29;UBERON:0000077,8.98e-14,35;UBERON:0007811,2.36e-13,36;UBERON:0000065,1.46e-11,41;UBERON:0001004,2.97e-11,42;UBERON:0002368,4.58e-11,60;UBERON:0000153,5.84e-11,43;UBERON:0002390,2.06e-10,45;UBERON:0003061,2.06e-10,45;UBERON:0002530,4.42e-10,65;UBERON:0002193,1.13e-09,48;UBERON:0002405,1.13e-09,48;UBERON:0000949,6.27e-09,72;UBERON:0003929,2.88e-08,55 | |||
|phase1_expression=0,0,0,0,0,0,0,3.35720640948098,0.84473233291,0.936258105287974,0,0.0797721589953364,2.22560948910567,1.22388563386596,0,0.202475267389826,0,0.315462165358238,0.411343300817216,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0.251793635951155,0.101376931219515,0.550640256485045,0,0,0,0,0,0,0,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0.441683036920787,0,0,0,0,0,0.359445373517761,0.599902730993408,0.254140454146129,0,0,0.125654352112864,0.347648640384553,0,0.20778804455956,0.162241263067758,0.305518091550949,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0.321101179975584,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,10.2131881726136,0,0,0,0,0.178368817602071,0.658196082408484,1.8267896946876,0,0,0,0,0,0.120625849856312,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0.27338845544205,0,1.01987057996313,1.39951452323658,0.690999869022119,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,2.52808896502543,0,0,0.25984164595559,0.537080087002444,0.596044064343795,1.56254084375959,0.590758108698309,1.41353029927407,2.28620419965,2.41982844328417,1.8516997340553,2.02044867444692,3.27255326108393,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.915758121336325,0.428736758158132,0,0,0,0,0,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,3.35720640948098,0.84473233291,0.936258105287974,0,0.0797721589953364,2.22560948910567,1.22388563386596,0,0.202475267389826,0,0.315462165358238,0.411343300817216,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0.683045484958446,0,0.251793635951155,0.101376931219515,0.550640256485045,0,0,0,0,0,0,0,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0,0.441683036920787,0,0,0,0,0,0.359445373517761,0.599902730993408,0.254140454146129,0,0,0.125654352112864,0.347648640384553,0,0.20778804455956,0.162241263067758,0.305518091550949,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.146199987425332,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0.321101179975584,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,10.2131881726136,0,0,0,0,0.178368817602071,0.658196082408484,1.8267896946876,0,0,0,0,0,0.120625849856312,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0.27338845544205,0,1.01987057996313,1.39951452323658,0.690999869022119,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,2.52808896502543,0,0,0.25984164595559,0.537080087002444,0.596044064343795,1.56254084375959,0.590758108698309,1.41353029927407,2.28620419965,2.41982844328417,1.8516997340553,2.02044867444692,3.27255326108393,0.226730383615211,0,0,0,0.19318959403219,0.375364950902364,0.915758121336325,0.428736758158132,0,0,0,0,0,0,0.755393897389701,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p12@Inadl | |||
}} | }} |
Latest revision as of 07:53, 27 September 2015
Short description: | p12@Inadl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Inadl_5end |
Coexpression cluster: | MCL_coexpression_mm9:84 |
Association with transcript: | -121bp_to_uc008tue.1_5end |
EntrezGene: | Inadl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.66e-14 | 9 |
alpha-beta T cell | 2.66e-14 | 9 |
immature T cell | 2.66e-14 | 9 |
mature T cell | 2.66e-14 | 9 |
immature alpha-beta T cell | 2.66e-14 | 9 |
T cell | 1.09e-11 | 11 |
pro-T cell | 1.09e-11 | 11 |
CD4-positive, alpha-beta T cell | 1.04e-10 | 8 |
lymphoid lineage restricted progenitor cell | 1.05e-10 | 12 |
lymphocyte | 7.12e-10 | 13 |
common lymphoid progenitor | 7.12e-10 | 13 |
leukocyte | 1.61e-07 | 17 |
nongranular leukocyte | 1.61e-07 | 17 |
regulatory T cell | 6.50e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.23e-21 | 23 |
neck | 1.23e-21 | 23 |
respiratory system epithelium | 1.23e-21 | 23 |
hemolymphoid system gland | 1.23e-21 | 23 |
pharyngeal epithelium | 1.23e-21 | 23 |
thymic region | 1.23e-21 | 23 |
pharyngeal gland | 1.23e-21 | 23 |
entire pharyngeal arch endoderm | 1.23e-21 | 23 |
thymus primordium | 1.23e-21 | 23 |
early pharyngeal endoderm | 1.23e-21 | 23 |
pharynx | 1.11e-20 | 24 |
gland of gut | 1.11e-20 | 24 |
upper respiratory tract | 1.11e-20 | 24 |
chordate pharynx | 1.11e-20 | 24 |
pharyngeal arch system | 1.11e-20 | 24 |
pharyngeal region of foregut | 1.11e-20 | 24 |
segment of respiratory tract | 3.04e-18 | 27 |
hemopoietic organ | 6.77e-17 | 29 |
immune organ | 6.77e-17 | 29 |
mixed endoderm/mesoderm-derived structure | 8.98e-14 | 35 |
craniocervical region | 2.36e-13 | 36 |
respiratory tract | 1.46e-11 | 41 |
respiratory system | 2.97e-11 | 42 |
endocrine gland | 4.58e-11 | 60 |
anterior region of body | 5.84e-11 | 43 |
hematopoietic system | 2.06e-10 | 45 |
blood island | 2.06e-10 | 45 |
gland | 4.42e-10 | 65 |
hemolymphoid system | 1.13e-09 | 48 |
immune system | 1.13e-09 | 48 |
endocrine system | 6.27e-09 | 72 |
gut epithelium | 2.88e-08 | 55 |