FFCP PHASE1:Mm9::chr3:81778465..81778472,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:81778465..81778472,-
|short_description=p@chr3:81778465..81778472,-
|description=CAGE_peak_at_chr3:81778465..81778472,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:81778465..81778472,- | |||
|description=CAGE_peak_at_chr3:81778465..81778472,- | |||
|id=chr3:81778465..81778472,- | |||
|ontology_enrichment_celltype=CL:0000181!2.72e-12!5;CL:0000417!2.72e-12!5;CL:0000668!2.72e-12!5;CL:0000412!2.72e-12!5;CL:0000182!2.72e-12!5;CL:0000414!3.32e-08!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.01e-19,5;CL:0000057,2.43e-07,1;CL:0000632,2.43e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!7.82e-22!22;UBERON:0007499!7.82e-22!22;UBERON:0006925!7.82e-22!22;UBERON:0009497!7.82e-22!22;UBERON:0000015!7.82e-22!22;UBERON:0002423!7.82e-22!22;UBERON:0006235!7.82e-22!22;UBERON:0008835!7.82e-22!22;UBERON:0003894!7.82e-22!22;UBERON:0004161!7.82e-22!22;UBERON:0008836!7.82e-22!22;UBERON:0009854!8.77e-21!23;UBERON:0009856!8.77e-21!23;UBERON:0002365!6.17e-19!25;UBERON:0002330!6.17e-19!25;UBERON:0005256!1.31e-10!47;UBERON:0005172!4.50e-10!49;UBERON:0005173!4.50e-10!49;UBERON:0002417!4.50e-10!49;UBERON:0000916!4.50e-10!49;UBERON:0005057!1.60e-09!51;UBERON:0002368!4.72e-09!60;UBERON:0003914!5.46e-09!47;UBERON:0003929!1.20e-08!55;UBERON:0002530!3.80e-08!65;UBERON:0009569!5.23e-08!66;UBERON:0005911!1.69e-07!69;UBERON:0002405!2.18e-07!70;UBERON:0000949!4.32e-07!72;UBERON:0000490!8.64e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.82e-31,22;UBERON:0007499,1.82e-31,22;UBERON:0006925,1.82e-31,22;UBERON:0009497,1.82e-31,22;UBERON:0000015,1.82e-31,22;UBERON:0002423,1.82e-31,22;UBERON:0006235,1.82e-31,22;UBERON:0008835,1.82e-31,22;UBERON:0003894,1.82e-31,22;UBERON:0004161,1.82e-31,22;UBERON:0008836,1.82e-31,22;UBERON:0009854,4.78e-30,23;UBERON:0009856,4.78e-30,23;UBERON:0002365,1.50e-27,25;UBERON:0002330,1.50e-27,25;UBERON:0005256,9.59e-15,45;UBERON:0003914,4.63e-14,47;UBERON:0005172,1.97e-13,49;UBERON:0005173,1.97e-13,49;UBERON:0002417,1.97e-13,49;UBERON:0000916,1.97e-13,49;UBERON:0003929,8.08e-12,55;UBERON:0002368,1.02e-10,60;UBERON:0003104,1.61e-10,61;UBERON:0009142,1.61e-10,61;UBERON:0002530,8.70e-10,65;UBERON:0000490,1.29e-09,66;UBERON:0009569,1.29e-09,66;UBERON:0005911,3.88e-09,69;UBERON:0000949,1.07e-08,72;UBERON:0005631,2.45e-08,3;UBERON:0000478,2.45e-08,3;UBERON:0000158,2.45e-08,3;UBERON:0005177,8.47e-08,79;UBERON:0001041,1.11e-07,80;UBERON:0000305,7.23e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60423876981386,1.3599426674155,37.2395202230094,14.2950811838487,10.7526452903361,1.82577746171277,0,0,0,0,0,0,0,0,0,0,11.9893073705013,0,0,0,0,0,0,0,0.251333182659351,1.23597483867187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33614728756868,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,1.5601883655728,5.80931419278357,6.45830688678884,11.5786445127208,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0.42438965179803,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60423876981386,1.3599426674155,37.2395202230094,14.2950811838487,10.7526452903361,1.82577746171277,0,0,0,0,0,0,0,0,0,0,11.9893073705013,0,0,0,0,0,0,0,0.251333182659351,1.23597483867187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33614728756868,0,0,0,0,0,0,0,0,0,1.43768206527355,0.372140947668503,1.5601883655728,5.80931419278357,6.45830688678884,11.5786445127208,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17335854031855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:81778465..81778472,- | |||
}} | }} |
Latest revision as of 01:22, 4 August 2015
Short description: | p@chr3:81778465..81778472, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:81778465..81778472, - |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.01e-19 | 5 |
fibroblast | 2.43e-07 | 1 |
hepatic stellate cell | 2.43e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 1.82e-31 | 22 |
epithelial sac | 1.82e-31 | 22 |
digestive gland | 1.82e-31 | 22 |
epithelium of foregut-midgut junction | 1.82e-31 | 22 |
anatomical boundary | 1.82e-31 | 22 |
hepatobiliary system | 1.82e-31 | 22 |
foregut-midgut junction | 1.82e-31 | 22 |
hepatic diverticulum | 1.82e-31 | 22 |
liver primordium | 1.82e-31 | 22 |
septum transversum | 1.82e-31 | 22 |
liver bud | 1.82e-31 | 22 |
digestive tract diverticulum | 4.78e-30 | 23 |
sac | 4.78e-30 | 23 |
exocrine gland | 1.50e-27 | 25 |
exocrine system | 1.50e-27 | 25 |
trunk mesenchyme | 9.59e-15 | 45 |
epithelial tube | 4.63e-14 | 47 |
abdomen element | 1.97e-13 | 49 |
abdominal segment element | 1.97e-13 | 49 |
abdominal segment of trunk | 1.97e-13 | 49 |
abdomen | 1.97e-13 | 49 |
gut epithelium | 8.08e-12 | 55 |
endocrine gland | 1.02e-10 | 60 |
mesenchyme | 1.61e-10 | 61 |
entire embryonic mesenchyme | 1.61e-10 | 61 |
gland | 8.70e-10 | 65 |
unilaminar epithelium | 1.29e-09 | 66 |
subdivision of trunk | 1.29e-09 | 66 |
endo-epithelium | 3.88e-09 | 69 |
endocrine system | 1.07e-08 | 72 |
extraembryonic membrane | 2.45e-08 | 3 |
extraembryonic structure | 2.45e-08 | 3 |
membranous layer | 2.45e-08 | 3 |
trunk region element | 8.47e-08 | 79 |
foregut | 1.11e-07 | 80 |
amnion | 7.23e-07 | 1 |