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FFCP PHASE1:Mm9::chr2:91035254..91035271,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:91035254..91035271,-
|DHSsupport=NA
|short_description=p3@Nr1h3
|DPIdataset=NA
|description=CAGE_peak_3_at_Nr1h3_5end
|association_with_transcript=0bp_to_uc008kvd.2_5end
|EntrezGene=22259
|EntrezGene=22259
|HGNC=
|HGNC=
|MCL_coexpression_id=175
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc008kvd.2_5end
|cluster_id=chr2:91035254..91035271,-
|description=CAGE_peak_3_at_Nr1h3_5end
|id=chr2:91035254..91035271,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,6.55e-08,25;CL:0002563,1.60e-07,9;CL:0002251,1.60e-07,9;CL:0000239,2.96e-07,6;CL:0000677,2.96e-07,6;CL:0000584,2.96e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!1.55e-12!22;UBERON:0007499!1.55e-12!22;UBERON:0006925!1.55e-12!22;UBERON:0009497!1.55e-12!22;UBERON:0000015!1.55e-12!22;UBERON:0002423!1.55e-12!22;UBERON:0006235!1.55e-12!22;UBERON:0008835!1.55e-12!22;UBERON:0003894!1.55e-12!22;UBERON:0004161!1.55e-12!22;UBERON:0008836!1.55e-12!22;UBERON:0009854!2.03e-11!23;UBERON:0009856!2.03e-11!23;UBERON:0002365!8.88e-11!25;UBERON:0002330!8.88e-11!25;UBERON:0000344!5.21e-09!15;UBERON:0000160!8.17e-09!43;UBERON:0004119!2.02e-08!130;UBERON:0000925!2.02e-08!130;UBERON:0006595!2.02e-08!130;UBERON:0001007!2.27e-08!128;UBERON:0001555!2.27e-08!128;UBERON:0007026!2.27e-08!128;UBERON:0005172!2.28e-08!49;UBERON:0005173!2.28e-08!49;UBERON:0002417!2.28e-08!49;UBERON:0000916!2.28e-08!49;UBERON:0001242!5.72e-08!13;UBERON:0000060!5.72e-08!13;UBERON:0001262!5.72e-08!13;UBERON:0004786!5.72e-08!13;UBERON:0004921!1.16e-07!126;UBERON:0004185!1.16e-07!126;UBERON:0005409!2.41e-07!59;UBERON:0004923!3.01e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.38e-21,31;UBERON:0002107,2.17e-17,22;UBERON:0007499,2.17e-17,22;UBERON:0006925,2.17e-17,22;UBERON:0009497,2.17e-17,22;UBERON:0000015,2.17e-17,22;UBERON:0002423,2.17e-17,22;UBERON:0006235,2.17e-17,22;UBERON:0008835,2.17e-17,22;UBERON:0003894,2.17e-17,22;UBERON:0004161,2.17e-17,22;UBERON:0008836,2.17e-17,22;UBERON:0009854,2.41e-16,23;UBERON:0009856,2.41e-16,23;UBERON:0002365,5.12e-16,25;UBERON:0002330,5.12e-16,25;UBERON:0000344,4.65e-13,15;UBERON:0001007,3.77e-12,116;UBERON:0001555,3.77e-12,116;UBERON:0007026,3.77e-12,116;UBERON:0005409,6.81e-12,47;UBERON:0004119,1.06e-11,118;UBERON:0000925,1.06e-11,118;UBERON:0006595,1.06e-11,118;UBERON:0001242,2.83e-11,13;UBERON:0001262,2.83e-11,13;UBERON:0004786,2.83e-11,13;UBERON:0004921,5.65e-11,114;UBERON:0003929,1.56e-09,55;UBERON:0003914,1.25e-08,47;UBERON:0005172,2.58e-08,49;UBERON:0005173,2.58e-08,49;UBERON:0002417,2.58e-08,49;UBERON:0000916,2.58e-08,49;UBERON:0004923,1.08e-07,24;UBERON:0005256,1.42e-07,45;UBERON:0003350,1.60e-07,9;UBERON:0004808,1.60e-07,9;UBERON:0001277,1.60e-07,9;UBERON:0000490,3.00e-07,66
|phase1_expression=0,9.77131141390211,5.45999087267443,10.8887116070459,7.01254021924886,3.02182689441402,1.63528848416868,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.7008658030214,0,0,3.83981814704176,4.35877634027623,5.7423196411502,4.30761996159075,5.17130958446134,5.70070258369122,6.04872311423834,2.21730510655305,0,0,0,3.17736781726402,2.99222361645286,0.816677425049476,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0.782391344348039,0.65407546914134,1.97717564461025,1.1665793944457,0.139986421625363,0,0,0,0,0.257259436035947,1.43266719969378,0,0,0,0,0,0,0.449949858640699,2.96659908770092,2.1314403448383,0.599200221036809,0.768436610643109,0,0,0.210324961351382,0,0,0,0,0,0,0,0.307213066512487,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0,0,0,0,0.151452386666368,0.151143120213571,0.289864488701678,9.46466264679525,4.75979933595425,24.8263468153396,18.1937396885347,19.2651561451854,8.42666520790511,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,8.33542321949138,1.55362730188303,1.48442139064825,0.520455980298408,0.304465478312141,0.922461989024234,0,0.352766121407114,1.88499886994513,2.71914464507811,6.07317299063629,0.884610551949874,0.323533699894818,0,0,0,0.585561594023094,0,4.34276993854605,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0.324482526135515,0,0.497627882440372,0,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.493679549740441,0.492502392237286,0.486412857275134,1.02339991197733,1.3173006917463,2.01309628140558,0,0,6.60837565967596,6.08236303326152,0,0.232236671860439,1.03093969057675,2.21851877085677,3.11329261382818,3.23383564391351,3.79623249235609,4.44687177754829,3.51869292320377,3.58121649674071,3.31438948102504,5.39291645192533,5.40345124686736,4.77939055810481,0,0.342745537829186,0,0.407302655690628,0,0.771494018793504,0.505892296994058,3.83786384746966,4.23896565171712,4.68909222902842,20.7516838961004,0.667380422864376,0.786235980452812,1.12431056192427,2.23146133527353,3.61765739628625,2.03700681425136,3.45235364940973,3.89124544260085,6.86403532970204,8.62609239164127,9.67566463938109,10.2972432127805,16.4176270665623,17.0427542845817,21.7099584613515,0.554259570499814,0,0,0.169745085775188,0.234690248288502,0.670025029767263,0.476087281772027,0.780534591431195,0,0.221464689648775,0.159454768657487,0.81931657357869,0.345369963731791,0.867894351489069,4.52373851817817,1.08781136763742,0,1.65562047782839,0.481651769963376,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.709700426041343,0.178065603667255,0,0.659880491890142,0,0,0,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0.948110273807448,0,1.03135543248187,1.02131881726136,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0.42366414172764,0,0.49465875882444,0.484393280087717,0.784068024066026,0.835606408021955,0.328281799490123,3.78925087618806,0.370850604021019,0.170870880797853,0.412773735926445,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0.539457385539283,0.909188012978695,0.523511883968059,1.68499465279331,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.350630706544707,0.453460767230423,0.221985953374065,0.0897138566094757,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0,0,1.35004500046361,0,0,0,0,0,0,0.486213434136588,0.628839487883947,0.919217542250071,0.44449345560323,0.206035057238894,1.28367683836726,0.758091635291392,1.2673964994512,1.88626341386076,0.842773567228942,1.02440243847791,0.516919220600519,0,0.811190281613988,0.578727661391115,0.412085900803307,0.441596760403192,1.37147700954166,1.06485483695602,0.953744759789284,0.290692833264657,0.941093804153306,0.338458431566706,0.73171189149109,0.789209134313529,0.679020569229309,1.12228454331548,1.18635018124174,0.886540341380071,0.818462086339379,0.309873682371932,0.578719832943424,0.249810577937946,1.40358965067245,0.429742108096597,0.956441660344217,0.882365676478062,0.927471342481686
|phase1_expression=0,9.77131141390211,5.45999087267443,10.8887116070459,7.01254021924886,3.02182689441402,1.63528848416868,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.7008658030214,0,0,3.83981814704176,4.35877634027623,5.7423196411502,4.30761996159075,5.17130958446134,5.70070258369122,6.04872311423834,2.21730510655305,0,0,0,3.17736781726402,2.99222361645286,0.816677425049476,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.367093504323363,0.782391344348039,0.65407546914134,1.97717564461025,1.1665793944457,0.139986421625363,0,0,0,0,0.257259436035947,1.43266719969378,0,0,0,0,0,0,0.449949858640699,2.96659908770092,2.1314403448383,0.599200221036809,0.768436610643109,0,0,0.210324961351382,0,0,0,0,0,0,0,0.307213066512487,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0,0,0,0,0.151452386666368,0.151143120213571,0.289864488701678,9.46466264679525,4.75979933595425,24.8263468153396,18.1937396885347,19.2651561451854,8.42666520790511,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,8.33542321949138,1.55362730188303,1.48442139064825,0.520455980298408,0.304465478312141,0.922461989024234,0,0.352766121407114,1.88499886994513,2.71914464507811,6.07317299063629,0.884610551949874,0.323533699894818,0,0,0,0.585561594023094,0,4.34276993854605,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0.324482526135515,0,0.497627882440372,0,0.841767423545896,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.493679549740441,0.492502392237286,0.486412857275134,1.02339991197733,1.3173006917463,2.01309628140558,0,0,6.60837565967596,6.08236303326152,0,0.232236671860439,1.03093969057675,2.21851877085677,3.11329261382818,3.23383564391351,3.79623249235609,4.44687177754829,3.51869292320377,3.58121649674071,3.31438948102504,5.39291645192533,5.40345124686736,4.77939055810481,0,0.342745537829186,0,0.407302655690628,0,0.771494018793504,0.505892296994058,3.83786384746966,4.23896565171712,4.68909222902842,20.7516838961004,0.667380422864376,0.786235980452812,1.12431056192427,2.23146133527353,3.61765739628625,2.03700681425136,3.45235364940973,3.89124544260085,6.86403532970204,8.62609239164127,9.67566463938109,10.2972432127805,16.4176270665623,17.0427542845817,21.7099584613515,0.554259570499814,0,0,0.169745085775188,0.234690248288502,0.670025029767263,0.476087281772027,0.780534591431195,0,0.221464689648775,0.159454768657487,0.81931657357869,0.345369963731791,0.867894351489069,4.52373851817817,1.08781136763742,0,1.65562047782839,0.481651769963376,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0.395287777946524,0.321321316421807,0.709700426041343,0.178065603667255,0,0.659880491890142,0,0,0,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0.948110273807448,0,1.03135543248187,1.02131881726136,0,0,0,0,0.178368817602071,0,0,0.23467170806371,0.42366414172764,0,0.49465875882444,0.484393280087717,0.784068024066026,0.835606408021955,0.328281799490123,3.78925087618806,0.370850604021019,0.170870880797853,0.412773735926445,0.185194527369712,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0.539457385539283,0.909188012978695,0.523511883968059,1.68499465279331,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0.240390899039938,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.350630706544707,0.453460767230423,0.221985953374065,0.0897138566094757,0,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0.460325236507177,0.572895513439397,0,0,0,1.35004500046361,0,0,0,0,0,0,0.486213434136588,0.628839487883947,0.919217542250071,0.44449345560323,0.206035057238894,1.28367683836726,0.758091635291392,1.2673964994512,1.88626341386076,0.842773567228942,1.02440243847791,0.516919220600519,0,0.811190281613988,0.578727661391115,0.412085900803307,0.441596760403192,1.37147700954166,1.06485483695602,0.953744759789284,0.290692833264657,0.941093804153306,0.338458431566706,0.73171189149109,0.789209134313529,0.679020569229309,1.12228454331548,1.18635018124174,0.886540341380071,0.818462086339379,0.309873682371932,0.578719832943424,0.249810577937946,1.40358965067245,0.429742108096597,0.956441660344217,0.882365676478062,0.927471342481686
|short_description=p3@Nr1h3
}}
}}

Latest revision as of 02:50, 27 September 2015

Short description:p3@Nr1h3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Nr1h3_5end
Coexpression cluster:MCL_coexpression_mm9:175
Association with transcript: 0bp_to_uc008kvd.2_5end
EntrezGene:Nr1h3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Nr1h3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H95.74
GP2+ M cell, pool2.CNhs13231.11846-124I14.31
GP2+ M cell, pool3.CNhs13240.11847-124I25.17
Ileum epithelium, pool1.CNhs13199.10252-104B95.70
Ileum epithelium, pool2.CNhs13232.10253-104C16.05
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.17
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C824.83
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.19
Mouse hepatocyte, donor8.CNhs13091.11824-124F619.27
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.34
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H16.07
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A36.08
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F73.23
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G14.78
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I13.84
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H14.69
liver, adult pregnant day01.CNhs10466.508-5B220.75
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G26.86
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H29.68
liver, neonate N10.CNhs11115.751-24B910.30
liver, neonate N20.CNhs11220.823-25A316.42
liver, neonate N25.CNhs11198.1368-26H117.04
liver, neonate N30.CNhs11106.1382-42D121.71
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.78
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell6.55e-0825
intestinal epithelial cell1.60e-079
epithelial cell of alimentary canal1.60e-079
brush border epithelial cell2.96e-076
gut absorptive cell2.96e-076
enterocyte2.96e-076

Uber anatomy
Ontology termp-valuen
intestine5.38e-2131
liver2.17e-1722
epithelial sac2.17e-1722
digestive gland2.17e-1722
epithelium of foregut-midgut junction2.17e-1722
anatomical boundary2.17e-1722
hepatobiliary system2.17e-1722
foregut-midgut junction2.17e-1722
hepatic diverticulum2.17e-1722
liver primordium2.17e-1722
septum transversum2.17e-1722
liver bud2.17e-1722
digestive tract diverticulum2.41e-1623
sac2.41e-1623
exocrine gland5.12e-1625
exocrine system5.12e-1625
mucosa4.65e-1315
digestive system3.77e-12116
digestive tract3.77e-12116
primitive gut3.77e-12116
gastrointestinal system6.81e-1247
endoderm-derived structure1.06e-11118
endoderm1.06e-11118
presumptive endoderm1.06e-11118
intestinal mucosa2.83e-1113
wall of intestine2.83e-1113
gastrointestinal system mucosa2.83e-1113
subdivision of digestive tract5.65e-11114
gut epithelium1.56e-0955
epithelial tube1.25e-0847
abdomen element2.58e-0849
abdominal segment element2.58e-0849
abdominal segment of trunk2.58e-0849
abdomen2.58e-0849
organ component layer1.08e-0724
trunk mesenchyme1.42e-0745
epithelium of mucosa1.60e-079
gastrointestinal system epithelium1.60e-079
intestinal epithelium1.60e-079
unilaminar epithelium3.00e-0766
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